RNA–Protein interactions for RNA: ENST00000556527.1

CRX-203, Transcript of cone-rod homeobox, humanhuman

TSL 1 (best)

Gene CRX, Length 164 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-203ENST00000556527 CEP85Q6P2H3 762 aa11.84□□□□□ -0.51
CRX-203ENST00000556527 POTEEQ6S8J3 1075 aa11.84□□□□□ -0.51
CRX-203ENST00000556527 TMEM179Q6ZVK1 233 aa11.84□□□□□ -0.51
CRX-203ENST00000556527 NCAPG2Q86XI2 1143 aa11.84□□□□□ -0.51
CRX-203ENST00000556527 MB21D1Q8N884 522 aa11.84□□□□□ -0.51
CRX-203ENST00000556527 RIOK1Q9BRS2 568 aaKnown RBP11.84□□□□□ -0.51
CRX-203ENST00000556527 PRDM5Q9NQX1 630 aaPredicted RBP11.84□□□□□ -0.51
CRX-203ENST00000556527 MTMR10Q9NXD2 777 aa11.84□□□□□ -0.51
CRX-203ENST00000556527 SWAP70Q9UH65 585 aa11.84□□□□□ -0.51
CRX-203ENST00000556527 CDK5RAP2Q96SN8 1893 aa11.83□□□□□ -0.52
CRX-203ENST00000556527 FLOT1O75955 427 aa11.83□□□□□ -0.52
CRX-203ENST00000556527 MS4A1P11836 297 aa11.83□□□□□ -0.52
CRX-203ENST00000556527 ERCC3P19447 782 aa11.83□□□□□ -0.52
CRX-203ENST00000556527 RTP1P59025 263 aa11.83□□□□□ -0.52
CRX-203ENST00000556527 GJC2Q5T442 439 aaPredicted RBP11.83□□□□□ -0.52
CRX-203ENST00000556527 OLFML2BQ68BL8 750 aa11.83□□□□□ -0.52
CRX-203ENST00000556527 NPLOC4Q8TAT6 608 aa11.83□□□□□ -0.52
CRX-203ENST00000556527 MOV10L1Q9BXT6 1211 aaKnown RBP11.83□□□□□ -0.52
CRX-203ENST00000556527 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.83□□□□□ -0.52
CRX-203ENST00000556527 SPATC1LQ9H0A9 340 aa11.83□□□□□ -0.52
CRX-203ENST00000556527 MROH8Q9H579 483 aa11.83□□□□□ -0.52
CRX-203ENST00000556527 LAMA3Q16787 3333 aa11.83□□□□□ -0.52
CRX-203ENST00000556527 MYH1P12882 1939 aa11.83□□□□□ -0.52
CRX-203ENST00000556527 ZNF532Q9HCE3 1301 aa11.83□□□□□ -0.52
CRX-203ENST00000556527 RAD21O60216 631 aa11.82□□□□□ -0.52
CRX-203ENST00000556527 RLBP1P12271 317 aa11.82□□□□□ -0.52
CRX-203ENST00000556527 FCER1AP12319 257 aa11.82□□□□□ -0.52
CRX-203ENST00000556527 CYBAP13498 195 aa11.82□□□□□ -0.52
CRX-203ENST00000556527 ICA1Q05084 483 aa11.82□□□□□ -0.52
CRX-203ENST00000556527 ZNF697Q5TEC3 545 aa11.82□□□□□ -0.52
CRX-203ENST00000556527 SPICE1Q8N0Z3 855 aa11.82□□□□□ -0.52
CRX-203ENST00000556527 SHCBP1Q8NEM2 672 aa11.82□□□□□ -0.52
CRX-203ENST00000556527 RHPN1Q8TCX5 695 aa11.82□□□□□ -0.52
CRX-203ENST00000556527 SDR42E1Q8WUS8 393 aa11.82□□□□□ -0.52
CRX-203ENST00000556527 KIF1BPQ96EK5 621 aa11.82□□□□□ -0.52
CRX-203ENST00000556527 SEPT4O43236 478 aa11.81□□□□□ -0.52
CRX-203ENST00000556527 GUCY1A2P33402 732 aa11.81□□□□□ -0.52
CRX-203ENST00000556527 GABPAQ06546 454 aa11.81□□□□□ -0.52
CRX-203ENST00000556527 ANO1Q5XXA6 986 aa11.81□□□□□ -0.52
CRX-203ENST00000556527 LCORLQ8N3X6 602 aa11.81□□□□□ -0.52
CRX-203ENST00000556527 CCDC17Q96LX7 622 aa11.81□□□□□ -0.52
CRX-203ENST00000556527 FAM161BQ96MY7 647 aa11.81□□□□□ -0.52
CRX-203ENST00000556527 ARMT1Q9H993 441 aa11.81□□□□□ -0.52
CRX-203ENST00000556527 DCP1AQ9NPI6 582 aaPredicted RBP11.81□□□□□ -0.52
CRX-203ENST00000556527 COL6A3P12111 3177 aa11.8□□□□□ -0.52
CRX-203ENST00000556527 A0A0C4DFX4 3053 aa11.8□□□□□ -0.52
CRX-203ENST00000556527 A0A1W2PRG0 241 aa11.8□□□□□ -0.52
CRX-203ENST00000556527 WDR46O15213 610 aaKnown RBP11.8□□□□□ -0.52
CRX-203ENST00000556527 SLC25A27O95847 323 aa11.8□□□□□ -0.52
CRX-203ENST00000556527 DSG3P32926 999 aa11.8□□□□□ -0.52
CRX-203ENST00000556527 KCTD2Q14681 263 aa11.8□□□□□ -0.52
CRX-203ENST00000556527 FAM109BQ6ICB4 259 aaPredicted RBP11.8□□□□□ -0.52
CRX-203ENST00000556527 SLC39A5Q6ZMH5 540 aa11.8□□□□□ -0.52
CRX-203ENST00000556527 ABRAQ8N0Z2 381 aa11.8□□□□□ -0.52
CRX-203ENST00000556527 SLC44A5Q8NCS7 719 aa11.8□□□□□ -0.52
CRX-203ENST00000556527 TRPV1Q8NER1 839 aa11.8□□□□□ -0.52
CRX-203ENST00000556527 PANK1Q8TE04 598 aa11.8□□□□□ -0.52
CRX-203ENST00000556527 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.8□□□□□ -0.52
CRX-203ENST00000556527 GOPCQ9HD26 462 aa11.8□□□□□ -0.52
CRX-203ENST00000556527 ATP8A2Q9NTI2 1148 aa11.8□□□□□ -0.52
CRX-203ENST00000556527 PAG1Q9NWQ8 432 aa11.8□□□□□ -0.52
CRX-203ENST00000556527 MYO5AQ9Y4I1 1855 aaKnown RBP11.8□□□□□ -0.52
CRX-203ENST00000556527 NAV1Q8NEY1 1877 aa11.79□□□□□ -0.52
CRX-203ENST00000556527 MBD4O95243 580 aa11.79□□□□□ -0.52
CRX-203ENST00000556527 CYP2D6P10635 497 aa11.79□□□□□ -0.52
CRX-203ENST00000556527 RARBP10826 455 aa11.79□□□□□ -0.52
CRX-203ENST00000556527 ADCYAP1R1P41586 468 aa11.79□□□□□ -0.52
CRX-203ENST00000556527 RNF180Q86T96 592 aa11.79□□□□□ -0.52
CRX-203ENST00000556527 FERMT2Q96AC1 680 aa11.79□□□□□ -0.52
CRX-203ENST00000556527 ATG4CQ96DT6 458 aa11.79□□□□□ -0.52
CRX-203ENST00000556527 DYNLL2Q96FJ2 89 aa11.79□□□□□ -0.52
CRX-203ENST00000556527 MMP19Q99542 508 aa11.79□□□□□ -0.52
CRX-203ENST00000556527 CHMP4BQ9H444 224 aaKnown RBP11.79□□□□□ -0.52
CRX-203ENST00000556527 VCPKMTQ9H867 229 aa11.79□□□□□ -0.52
CRX-203ENST00000556527 TMX2Q9Y320 296 aa11.79□□□□□ -0.52
CRX-203ENST00000556527 POTEB2H3BUK9 544 aa11.78□□□□□ -0.52
CRX-203ENST00000556527 COBLO75128 1261 aa11.78□□□□□ -0.52
CRX-203ENST00000556527 RAB11FIP3O75154 756 aa11.78□□□□□ -0.52
CRX-203ENST00000556527 AKR1B1P15121 316 aa11.78□□□□□ -0.52
CRX-203ENST00000556527 COPB2P35606 906 aa11.78□□□□□ -0.52
CRX-203ENST00000556527 TRIM60Q495X7 471 aa11.78□□□□□ -0.52
CRX-203ENST00000556527 PRAMEF19Q5SWL8 479 aa11.78□□□□□ -0.52
CRX-203ENST00000556527 ZSCAN25Q6NSZ9 544 aa11.78□□□□□ -0.52
CRX-203ENST00000556527 CLEC10AQ8IUN9 316 aa11.78□□□□□ -0.52
CRX-203ENST00000556527 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.78□□□□□ -0.52
CRX-203ENST00000556527 RPAP2Q8IXW5 612 aaPredicted RBP11.78□□□□□ -0.52
CRX-203ENST00000556527 MAML3Q96JK9 1138 aa11.78□□□□□ -0.52
CRX-203ENST00000556527 BOLA2Q9H3K6 86 aa11.78□□□□□ -0.52
CRX-203ENST00000556527 KANSL2Q9H9L4 492 aa11.78□□□□□ -0.52
CRX-203ENST00000556527 XPNPEP3Q9NQH7 507 aa11.78□□□□□ -0.52
CRX-203ENST00000556527 CNPY2Q9Y2B0 182 aa11.78□□□□□ -0.52
CRX-203ENST00000556527 CTDP1Q9Y5B0 961 aaPredicted RBP11.78□□□□□ -0.52
CRX-203ENST00000556527 TCRBV5S4A2TA0A5A2 114 aa11.77□□□□□ -0.53
CRX-203ENST00000556527 USP17L12C9JPN9 530 aa11.77□□□□□ -0.53
CRX-203ENST00000556527 USP17L21D6R901 530 aa11.77□□□□□ -0.53
CRX-203ENST00000556527 PRKAB2O43741 272 aa11.77□□□□□ -0.53
CRX-203ENST00000556527 ADD2P35612 726 aa11.77□□□□□ -0.53
CRX-203ENST00000556527 CDK8P49336 464 aa11.77□□□□□ -0.53
CRX-203ENST00000556527 EVX2Q03828 476 aa11.77□□□□□ -0.53
CRX-203ENST00000556527 LRRC41Q15345 812 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms