RNA–Protein interactions for RNA: ENST00000556272.1

PCNX1-211, Transcript of pecanex 1, humanhuman

TSL 2

Gene PCNX1, Length 2,942 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-211ENST00000556272 CDHR2Q9BYE9 1310 aa8.46□□□□□ -1.06
PCNX1-211ENST00000556272 A0A1B0GUL7 405 aa8.46□□□□□ -1.06
PCNX1-211ENST00000556272 KIF2AO00139 706 aaPredicted RBP8.46□□□□□ -1.06
PCNX1-211ENST00000556272 PTGS1P23219 599 aa8.46□□□□□ -1.06
PCNX1-211ENST00000556272 MAN1A1P33908 653 aa8.46□□□□□ -1.06
PCNX1-211ENST00000556272 MAPK8P45983 427 aa8.46□□□□□ -1.06
PCNX1-211ENST00000556272 KCNJ6P48051 423 aa8.46□□□□□ -1.06
PCNX1-211ENST00000556272 C14orf80Q86SX3 495 aa8.46□□□□□ -1.06
PCNX1-211ENST00000556272 CEP57L1Q8IYX8 460 aa8.46□□□□□ -1.06
PCNX1-211ENST00000556272 SH3TC2Q8TF17 1288 aa8.46□□□□□ -1.06
PCNX1-211ENST00000556272 ANKRD7Q92527 254 aa8.46□□□□□ -1.06
PCNX1-211ENST00000556272 MRPS27Q92552 414 aaKnown RBP8.46□□□□□ -1.06
PCNX1-211ENST00000556272 KIF12Q96FN5 646 aa8.46□□□□□ -1.06
PCNX1-211ENST00000556272 MKNK1Q9BUB5 465 aa8.46□□□□□ -1.06
PCNX1-211ENST00000556272 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.46□□□□□ -1.06
PCNX1-211ENST00000556272 CNTN3Q9P232 1028 aa8.46□□□□□ -1.06
PCNX1-211ENST00000556272 PUF60Q9UHX1 559 aaKnown RBP8.46□□□□□ -1.06
PCNX1-211ENST00000556272 CLEC11AQ9Y240 323 aa8.46□□□□□ -1.06
PCNX1-211ENST00000556272 SH3BP1Q9Y3L3 701 aa8.46□□□□□ -1.06
PCNX1-211ENST00000556272 ZMYM6O95789 1325 aa8.46□□□□□ -1.06
PCNX1-211ENST00000556272 PCCAP05165 728 aaPredicted RBP8.45□□□□□ -1.06
PCNX1-211ENST00000556272 MASP1P48740 699 aa8.45□□□□□ -1.06
PCNX1-211ENST00000556272 CLDN10P78369 228 aa8.45□□□□□ -1.06
PCNX1-211ENST00000556272 APOBRQ0VD83 1088 aa8.45□□□□□ -1.06
PCNX1-211ENST00000556272 VPS72Q15906 364 aa8.45□□□□□ -1.06
PCNX1-211ENST00000556272 C1QTNF12Q5T7M4 302 aa8.45□□□□□ -1.06
PCNX1-211ENST00000556272 CCDC186Q7Z3E2 898 aa8.45□□□□□ -1.06
PCNX1-211ENST00000556272 SPC24Q8NBT2 197 aa8.45□□□□□ -1.06
PCNX1-211ENST00000556272 APPBP2Q92624 585 aa8.45□□□□□ -1.06
PCNX1-211ENST00000556272 RSPH9Q9H1X1 276 aaPredicted RBP8.45□□□□□ -1.06
PCNX1-211ENST00000556272 DNAJC25Q9H1X3 360 aa8.45□□□□□ -1.06
PCNX1-211ENST00000556272 MYO1BO43795 1136 aa8.45□□□□□ -1.06
PCNX1-211ENST00000556272 CDC27P30260 824 aa8.45□□□□□ -1.06
PCNX1-211ENST00000556272 CHRNA2Q15822 529 aa8.45□□□□□ -1.06
PCNX1-211ENST00000556272 PUS10Q3MIT2 529 aaKnown RBP8.45□□□□□ -1.06
PCNX1-211ENST00000556272 TIAM2Q8IVF5 1701 aa8.45□□□□□ -1.06
PCNX1-211ENST00000556272 DRC7Q8IY82 874 aa8.45□□□□□ -1.06
PCNX1-211ENST00000556272 SNTG2Q9NY99 539 aa8.45□□□□□ -1.06
PCNX1-211ENST00000556272 CSF1RP07333 972 aa8.44□□□□□ -1.06
PCNX1-211ENST00000556272 CTSHP09668 335 aa8.44□□□□□ -1.06
PCNX1-211ENST00000556272 POU3F3P20264 500 aaPredicted RBP8.44□□□□□ -1.06
PCNX1-211ENST00000556272 NR6A1Q15406 480 aa8.44□□□□□ -1.06
PCNX1-211ENST00000556272 FMR1NBQ8N0W7 255 aaPredicted RBP8.44□□□□□ -1.06
PCNX1-211ENST00000556272 TIGD1Q96MW7 591 aa8.44□□□□□ -1.06
PCNX1-211ENST00000556272 USP28Q96RU2 1077 aa8.44□□□□□ -1.06
PCNX1-211ENST00000556272 CDC5LQ99459 802 aaKnown RBP8.44□□□□□ -1.06
PCNX1-211ENST00000556272 CARD10Q9BWT7 1032 aa8.44□□□□□ -1.06
PCNX1-211ENST00000556272 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.44□□□□□ -1.06
PCNX1-211ENST00000556272 PRDM11Q9NQV5 511 aa8.44□□□□□ -1.06
PCNX1-211ENST00000556272 AKAP11Q9UKA4 1901 aa8.44□□□□□ -1.06
PCNX1-211ENST00000556272 DOCK2Q92608 1830 aa8.44□□□□□ -1.06
PCNX1-211ENST00000556272 MAP3K15Q6ZN16 1313 aa8.44□□□□□ -1.06
PCNX1-211ENST00000556272 ESYT3A0FGR9 886 aa8.44□□□□□ -1.06
PCNX1-211ENST00000556272 TBX3O15119 743 aa8.44□□□□□ -1.06
PCNX1-211ENST00000556272 ZRANB2O95218 330 aaKnown RBP eCLIP8.44□□□□□ -1.06
PCNX1-211ENST00000556272 RRM1P23921 792 aa8.44□□□□□ -1.06
PCNX1-211ENST00000556272 TCIRG1Q13488 830 aa8.44□□□□□ -1.06
PCNX1-211ENST00000556272 TTF1Q15361 905 aaPredicted RBP8.44□□□□□ -1.06
PCNX1-211ENST00000556272 CCDC57Q2TAC2 916 aa8.44□□□□□ -1.06
PCNX1-211ENST00000556272 TTC39AQ5SRH9 613 aa8.44□□□□□ -1.06
PCNX1-211ENST00000556272 MB21D2Q8IYB1 491 aaPredicted RBP8.44□□□□□ -1.06
PCNX1-211ENST00000556272 PDCL2Q8N4E4 241 aa8.44□□□□□ -1.06
PCNX1-211ENST00000556272 NCOA7Q8NI08 942 aa8.44□□□□□ -1.06
PCNX1-211ENST00000556272 DDX11Q96FC9 970 aa8.44□□□□□ -1.06
PCNX1-211ENST00000556272 PLCH1Q4KWH8 1693 aa8.44□□□□□ -1.06
PCNX1-211ENST00000556272 NID2Q14112 1375 aa8.44□□□□□ -1.06
PCNX1-211ENST00000556272 BECN2A8MW95 431 aa8.43□□□□□ -1.06
PCNX1-211ENST00000556272 CDKL5O76039 1030 aa8.43□□□□□ -1.06
PCNX1-211ENST00000556272 SRGNP10124 158 aa8.43□□□□□ -1.06
PCNX1-211ENST00000556272 COL6A1P12109 1028 aa8.43□□□□□ -1.06
PCNX1-211ENST00000556272 SCP2P22307 547 aa8.43□□□□□ -1.06
PCNX1-211ENST00000556272 EN1Q05925 392 aaPredicted RBP8.43□□□□□ -1.06
PCNX1-211ENST00000556272 INO80DQ53TQ3 878 aaPredicted RBP8.43□□□□□ -1.06
PCNX1-211ENST00000556272 PPP4R4Q6NUP7 873 aa8.43□□□□□ -1.06
PCNX1-211ENST00000556272 TTLL7Q6ZT98 887 aa8.43□□□□□ -1.06
PCNX1-211ENST00000556272 LRRC8AQ8IWT6 810 aa8.43□□□□□ -1.06
PCNX1-211ENST00000556272 LINC00301Q8NCQ3 95 aa8.43□□□□□ -1.06
PCNX1-211ENST00000556272 GOLPH3LQ9H4A5 285 aa8.43□□□□□ -1.06
PCNX1-211ENST00000556272 BCL2L12Q9HB09 334 aa8.43□□□□□ -1.06
PCNX1-211ENST00000556272 CHMP3Q9Y3E7 222 aa8.43□□□□□ -1.06
PCNX1-211ENST00000556272 TTC36A6NLP5 189 aa8.43□□□□□ -1.06
PCNX1-211ENST00000556272 M0R2C6 588 aa8.43□□□□□ -1.06
PCNX1-211ENST00000556272 OATP04181 439 aa8.43□□□□□ -1.06
PCNX1-211ENST00000556272 TPM4P67936 248 aa8.43□□□□□ -1.06
PCNX1-211ENST00000556272 FKBP4Q02790 459 aaKnown RBP eCLIP8.43□□□□□ -1.06
PCNX1-211ENST00000556272 PSMD2Q13200 908 aa8.43□□□□□ -1.06
PCNX1-211ENST00000556272 RASA3Q14644 834 aa8.43□□□□□ -1.06
PCNX1-211ENST00000556272 BRD3Q15059 726 aa8.43□□□□□ -1.06
PCNX1-211ENST00000556272 TKFCQ3LXA3 575 aa8.43□□□□□ -1.06
PCNX1-211ENST00000556272 HSP90AB3PQ58FF7 597 aa8.43□□□□□ -1.06
PCNX1-211ENST00000556272 KIAA0907Q7Z7F0 614 aaPredicted RBP8.43□□□□□ -1.06
PCNX1-211ENST00000556272 DHX40Q8IX18 779 aaKnown RBP8.43□□□□□ -1.06
PCNX1-211ENST00000556272 ELOA2Q8IYF1 753 aaPredicted RBP8.43□□□□□ -1.06
PCNX1-211ENST00000556272 FSIP1Q8NA03 581 aa8.43□□□□□ -1.06
PCNX1-211ENST00000556272 FBXO18Q8NFZ0 1043 aa8.43□□□□□ -1.06
PCNX1-211ENST00000556272 FEZ1Q99689 392 aa8.43□□□□□ -1.06
PCNX1-211ENST00000556272 OSBPL5Q9H0X9 879 aaPredicted RBP8.43□□□□□ -1.06
PCNX1-211ENST00000556272 ZNF408Q9H9D4 720 aa8.43□□□□□ -1.06
PCNX1-211ENST00000556272 ECM29Q5VYK3 1845 aa8.43□□□□□ -1.06
PCNX1-211ENST00000556272 RIC1Q4ADV7 1423 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms