RNA–Protein interactions for RNA: ENST00000555608.5

EFCAB11-207, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2

Gene EFCAB11, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-207ENST00000555608 SUPT16HQ9Y5B9 1047 aaKnown RBP17.79■□□□□ 0.44
EFCAB11-207ENST00000555608 IGHDP01880 384 aa17.78■□□□□ 0.44
EFCAB11-207ENST00000555608 LRRFIP1Q32MZ4 808 aaKnown RBP17.78■□□□□ 0.44
EFCAB11-207ENST00000555608 BTBD7Q9P203 1132 aa17.78■□□□□ 0.44
EFCAB11-207ENST00000555608 STAP2Q9UGK3 403 aa17.78■□□□□ 0.44
EFCAB11-207ENST00000555608 EEF2P13639 858 aaKnown RBP17.77■□□□□ 0.44
EFCAB11-207ENST00000555608 GNAT2P19087 354 aa17.77■□□□□ 0.44
EFCAB11-207ENST00000555608 CYP2B6P20813 491 aa17.77■□□□□ 0.44
EFCAB11-207ENST00000555608 RASA1P20936 1047 aa17.77■□□□□ 0.44
EFCAB11-207ENST00000555608 TRIM32Q13049 653 aa17.77■□□□□ 0.44
EFCAB11-207ENST00000555608 GIMAP6Q6P9H5 292 aa17.77■□□□□ 0.44
EFCAB11-207ENST00000555608 SAMD1Q6SPF0 538 aaPredicted RBP17.77■□□□□ 0.44
EFCAB11-207ENST00000555608 GPR142Q7Z601 462 aa17.77■□□□□ 0.44
EFCAB11-207ENST00000555608 CCAR1Q8IX12 1150 aaKnown RBP17.77■□□□□ 0.44
EFCAB11-207ENST00000555608 SMC5Q8IY18 1101 aa17.77■□□□□ 0.44
EFCAB11-207ENST00000555608 VCPKMTQ9H867 229 aa17.77■□□□□ 0.44
EFCAB11-207ENST00000555608 CWC22Q9HCG8 908 aaKnown RBP17.77■□□□□ 0.44
EFCAB11-207ENST00000555608 RABGAP1Q9Y3P9 1069 aa17.77■□□□□ 0.44
EFCAB11-207ENST00000555608 PRDM1O75626 825 aa17.76■□□□□ 0.43
EFCAB11-207ENST00000555608 MAPK4P31152 587 aa17.76■□□□□ 0.43
EFCAB11-207ENST00000555608 IRX6P78412 446 aaPredicted RBP17.76■□□□□ 0.43
EFCAB11-207ENST00000555608 AAMPQ13685 434 aa17.76■□□□□ 0.43
EFCAB11-207ENST00000555608 WDR78Q5VTH9 848 aa17.76■□□□□ 0.43
EFCAB11-207ENST00000555608 IFNL3Q8IZI9 196 aa17.76■□□□□ 0.43
EFCAB11-207ENST00000555608 TRIB2Q92519 343 aa17.76■□□□□ 0.43
EFCAB11-207ENST00000555608 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.76■□□□□ 0.43
EFCAB11-207ENST00000555608 RWDD1Q9H446 243 aaPredicted RBP17.76■□□□□ 0.43
EFCAB11-207ENST00000555608 MKNK2Q9HBH9 465 aa17.76■□□□□ 0.43
EFCAB11-207ENST00000555608 TMX2Q9Y320 296 aa17.76■□□□□ 0.43
EFCAB11-207ENST00000555608 PATL2C9JE40 543 aaKnown RBP17.75■□□□□ 0.43
EFCAB11-207ENST00000555608 RAD21O60216 631 aa17.75■□□□□ 0.43
EFCAB11-207ENST00000555608 HMGCRP04035 888 aa17.75■□□□□ 0.43
EFCAB11-207ENST00000555608 GJB1P08034 283 aa17.75■□□□□ 0.43
EFCAB11-207ENST00000555608 GJA8P48165 433 aa17.75■□□□□ 0.43
EFCAB11-207ENST00000555608 LBX2Q6XYB7 198 aa17.75■□□□□ 0.43
EFCAB11-207ENST00000555608 PLEKHH3Q7Z736 793 aa17.75■□□□□ 0.43
EFCAB11-207ENST00000555608 U2AF1L4Q8WU68 220 aaKnown RBP17.75■□□□□ 0.43
EFCAB11-207ENST00000555608 EVI5LQ96CN4 794 aa17.75■□□□□ 0.43
EFCAB11-207ENST00000555608 NUDT12Q9BQG2 462 aa17.75■□□□□ 0.43
EFCAB11-207ENST00000555608 SH2D4AQ9H788 454 aa17.75■□□□□ 0.43
EFCAB11-207ENST00000555608 FOXP2O15409 715 aa17.74■□□□□ 0.43
EFCAB11-207ENST00000555608 FLOT1O75955 427 aa17.74■□□□□ 0.43
EFCAB11-207ENST00000555608 SOCS4Q8WXH5 440 aa17.74■□□□□ 0.43
EFCAB11-207ENST00000555608 LPAR1Q92633 364 aa17.74■□□□□ 0.43
EFCAB11-207ENST00000555608 ATG4CQ96DT6 458 aa17.74■□□□□ 0.43
EFCAB11-207ENST00000555608 NAPBQ9H115 298 aa17.74■□□□□ 0.43
EFCAB11-207ENST00000555608 KANSL2Q9H9L4 492 aa17.74■□□□□ 0.43
EFCAB11-207ENST00000555608 FRMPD3Q5JV73 1810 aa17.74■□□□□ 0.43
EFCAB11-207ENST00000555608 ZNF236Q9UL36 1845 aa17.73■□□□□ 0.43
EFCAB11-207ENST00000555608 WDR46O15213 610 aaKnown RBP17.73■□□□□ 0.43
EFCAB11-207ENST00000555608 CCNA1P78396 465 aa17.73■□□□□ 0.43
EFCAB11-207ENST00000555608 CCL14Q16627 93 aa17.73■□□□□ 0.43
EFCAB11-207ENST00000555608 MORN1Q5T089 497 aa17.73■□□□□ 0.43
EFCAB11-207ENST00000555608 VPS53Q5VIR6 699 aa17.73■□□□□ 0.43
EFCAB11-207ENST00000555608 CHD1LQ86WJ1 897 aa17.73■□□□□ 0.43
EFCAB11-207ENST00000555608 FAM227BQ96M60 508 aa17.73■□□□□ 0.43
EFCAB11-207ENST00000555608 DEFB118Q96PH6 123 aa17.73■□□□□ 0.43
EFCAB11-207ENST00000555608 NACAP1Q9BZK3 213 aa17.73■□□□□ 0.43
EFCAB11-207ENST00000555608 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.73■□□□□ 0.43
EFCAB11-207ENST00000555608 A0A0D9SFI3 127 aa17.72■□□□□ 0.43
EFCAB11-207ENST00000555608 TRIM6-TRIM34B2RNG4 842 aa17.72■□□□□ 0.43
EFCAB11-207ENST00000555608 ZKSCAN1P17029 563 aaPredicted RBP17.72■□□□□ 0.43
EFCAB11-207ENST00000555608 DSG3P32926 999 aa17.72■□□□□ 0.43
EFCAB11-207ENST00000555608 RGS2P41220 211 aa17.72■□□□□ 0.43
EFCAB11-207ENST00000555608 NUCB1Q02818 461 aa17.72■□□□□ 0.43
EFCAB11-207ENST00000555608 PPARAQ07869 468 aa17.72■□□□□ 0.43
EFCAB11-207ENST00000555608 COG2Q14746 738 aa17.72■□□□□ 0.43
EFCAB11-207ENST00000555608 NKX2-3Q8TAU0 364 aa17.72■□□□□ 0.43
EFCAB11-207ENST00000555608 USP6NLQ92738 828 aa17.72■□□□□ 0.43
EFCAB11-207ENST00000555608 APBA2Q99767 749 aa17.72■□□□□ 0.43
EFCAB11-207ENST00000555608 PAK6Q9NQU5 681 aaPredicted RBP17.72■□□□□ 0.43
EFCAB11-207ENST00000555608 FBXO28Q9NVF7 368 aa17.72■□□□□ 0.43
EFCAB11-207ENST00000555608 SGPL1O95470 568 aa17.71■□□□□ 0.43
EFCAB11-207ENST00000555608 PLS1Q14651 629 aa17.71■□□□□ 0.43
EFCAB11-207ENST00000555608 FAM83BQ5T0W9 1011 aa17.71■□□□□ 0.43
EFCAB11-207ENST00000555608 PLEKHM2Q8IWE5 1019 aa17.71■□□□□ 0.43
EFCAB11-207ENST00000555608 RILPL2Q969X0 211 aa17.71■□□□□ 0.43
EFCAB11-207ENST00000555608 NUP88Q99567 741 aaPredicted RBP17.71■□□□□ 0.43
EFCAB11-207ENST00000555608 MOV10L1Q9BXT6 1211 aaKnown RBP17.71■□□□□ 0.43
EFCAB11-207ENST00000555608 GOPCQ9HD26 462 aa17.71■□□□□ 0.43
EFCAB11-207ENST00000555608 ALPK3Q96L96 1907 aa17.7■□□□□ 0.42
EFCAB11-207ENST00000555608 IGKV6D-41A0A0C4DH26 115 aa17.7■□□□□ 0.42
EFCAB11-207ENST00000555608 FARP2O94887 1054 aaPredicted RBP17.7■□□□□ 0.42
EFCAB11-207ENST00000555608 PRKAR2AP13861 404 aaKnown RBP17.7■□□□□ 0.42
EFCAB11-207ENST00000555608 CTDSPL2Q05D32 466 aa17.7■□□□□ 0.42
EFCAB11-207ENST00000555608 MAP2K5Q13163 448 aa17.7■□□□□ 0.42
EFCAB11-207ENST00000555608 NMIQ13287 307 aaPredicted RBP17.7■□□□□ 0.42
EFCAB11-207ENST00000555608 FAM47AQ5JRC9 791 aa17.7■□□□□ 0.42
EFCAB11-207ENST00000555608 ZNF444Q8N0Y2 327 aaPredicted RBP17.7■□□□□ 0.42
EFCAB11-207ENST00000555608 CEP95Q96GE4 821 aa17.7■□□□□ 0.42
EFCAB11-207ENST00000555608 SPATC1LQ9H0A9 340 aa17.7■□□□□ 0.42
EFCAB11-207ENST00000555608 HOXC10Q9NYD6 342 aa17.7■□□□□ 0.42
EFCAB11-207ENST00000555608 PLIN4Q96Q06 1357 aa17.69■□□□□ 0.42
EFCAB11-207ENST00000555608 PTPREP23469 700 aa17.69■□□□□ 0.42
EFCAB11-207ENST00000555608 HABP4Q5JVS0 413 aaKnown RBP17.69■□□□□ 0.42
EFCAB11-207ENST00000555608 ZNF589Q86UQ0 364 aaPredicted RBP17.69■□□□□ 0.42
EFCAB11-207ENST00000555608 LRRC47Q8N1G4 583 aaKnown RBP17.69■□□□□ 0.42
EFCAB11-207ENST00000555608 INCENPQ9NQS7 918 aa17.69■□□□□ 0.42
EFCAB11-207ENST00000555608 HELLSQ9NRZ9 838 aa17.69■□□□□ 0.42
EFCAB11-207ENST00000555608 FLRT1Q9NZU1 646 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms