RNA–Protein interactions for RNA: ENST00000555094.5

GABRB3-208, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,494 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-208ENST00000555094 KIF5BP33176 963 aa12.6□□□□□ -0.39
GABRB3-208ENST00000555094 RRP1BQ14684 758 aaKnown RBP12.6□□□□□ -0.39
GABRB3-208ENST00000555094 C9orf131Q5VYM1 1079 aa12.6□□□□□ -0.39
GABRB3-208ENST00000555094 OTUD7BQ6GQQ9 843 aa12.6□□□□□ -0.39
GABRB3-208ENST00000555094 TRPM4Q8TD43 1214 aa12.6□□□□□ -0.39
GABRB3-208ENST00000555094 WASF1Q92558 559 aa12.6□□□□□ -0.39
GABRB3-208ENST00000555094 GJB4Q9NTQ9 266 aa12.6□□□□□ -0.39
GABRB3-208ENST00000555094 MAD2L2Q9UI95 211 aa12.6□□□□□ -0.39
GABRB3-208ENST00000555094 BAZ2BQ9UIF8 2168 aaKnown RBP12.6□□□□□ -0.39
GABRB3-208ENST00000555094 PALM3A6NDB9 673 aaPredicted RBP12.59□□□□□ -0.39
GABRB3-208ENST00000555094 H7C1D1 291 aa12.59□□□□□ -0.39
GABRB3-208ENST00000555094 PRPF3O43395 683 aaKnown RBP12.59□□□□□ -0.39
GABRB3-208ENST00000555094 GDF11O95390 407 aa12.59□□□□□ -0.39
GABRB3-208ENST00000555094 PTMSP20962 102 aa12.59□□□□□ -0.39
GABRB3-208ENST00000555094 TNNI2P48788 182 aa12.59□□□□□ -0.39
GABRB3-208ENST00000555094 JAG1P78504 1218 aa12.59□□□□□ -0.39
GABRB3-208ENST00000555094 DNM1Q05193 864 aaKnown RBP12.59□□□□□ -0.39
GABRB3-208ENST00000555094 TNFAIP1Q13829 316 aa12.59□□□□□ -0.39
GABRB3-208ENST00000555094 RASA3Q14644 834 aa12.59□□□□□ -0.39
GABRB3-208ENST00000555094 PKN1Q16512 942 aa12.59□□□□□ -0.39
GABRB3-208ENST00000555094 ABCB5Q2M3G0 1257 aa12.59□□□□□ -0.39
GABRB3-208ENST00000555094 SLC35G1Q2M3R5 365 aa12.59□□□□□ -0.39
GABRB3-208ENST00000555094 PPP4R3BQ5MIZ7 849 aa12.59□□□□□ -0.39
GABRB3-208ENST00000555094 TMEM179Q6ZVK1 233 aa12.59□□□□□ -0.39
GABRB3-208ENST00000555094 LRRC47Q8N1G4 583 aaKnown RBP12.59□□□□□ -0.39
GABRB3-208ENST00000555094 STAG2Q8N3U4 1231 aa12.59□□□□□ -0.39
GABRB3-208ENST00000555094 CCDC82Q8N4S0 544 aa12.59□□□□□ -0.39
GABRB3-208ENST00000555094 TMEM87AQ8NBN3 555 aa12.59□□□□□ -0.39
GABRB3-208ENST00000555094 TEPSINQ96N21 525 aa12.59□□□□□ -0.39
GABRB3-208ENST00000555094 ZSCAN16Q9H4T2 348 aaPredicted RBP12.59□□□□□ -0.39
GABRB3-208ENST00000555094 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.59□□□□□ -0.39
GABRB3-208ENST00000555094 LMBRD1Q9NUN5 540 aa12.59□□□□□ -0.39
GABRB3-208ENST00000555094 HACL1Q9UJ83 578 aa12.59□□□□□ -0.39
GABRB3-208ENST00000555094 CNPY2Q9Y2B0 182 aa12.59□□□□□ -0.39
GABRB3-208ENST00000555094 DOCK1Q14185 1865 aa12.59□□□□□ -0.39
GABRB3-208ENST00000555094 TBC1D12O60347 775 aa12.59□□□□□ -0.39
GABRB3-208ENST00000555094 SNHG28P0DPA3 235 aa12.59□□□□□ -0.39
GABRB3-208ENST00000555094 GNAQP50148 359 aa12.59□□□□□ -0.39
GABRB3-208ENST00000555094 KIF23Q02241 960 aaPredicted RBP12.59□□□□□ -0.39
GABRB3-208ENST00000555094 SEPT2Q15019 361 aa12.59□□□□□ -0.39
GABRB3-208ENST00000555094 KRT40Q6A162 431 aa12.59□□□□□ -0.39
GABRB3-208ENST00000555094 FAM173BQ6P4H8 233 aa12.59□□□□□ -0.39
GABRB3-208ENST00000555094 IFNLR1Q8IU57 520 aaPredicted RBP12.59□□□□□ -0.39
GABRB3-208ENST00000555094 SHISA4Q96DD7 197 aa12.59□□□□□ -0.39
GABRB3-208ENST00000555094 CLIP2Q9UDT6 1046 aa12.59□□□□□ -0.39
GABRB3-208ENST00000555094 SCAF8Q9UPN6 1271 aaKnown RBP12.59□□□□□ -0.39
GABRB3-208ENST00000555094 USP17L5A8MUK1 530 aa12.58□□□□□ -0.4
GABRB3-208ENST00000555094 KIF28PB7ZC32 967 aa12.58□□□□□ -0.4
GABRB3-208ENST00000555094 DDNO94850 711 aaPredicted RBP12.58□□□□□ -0.4
GABRB3-208ENST00000555094 GH2P01242 217 aa12.58□□□□□ -0.4
GABRB3-208ENST00000555094 PDHBP11177 359 aa12.58□□□□□ -0.4
GABRB3-208ENST00000555094 EPS15P42566 896 aa12.58□□□□□ -0.4
GABRB3-208ENST00000555094 MAP3K10Q02779 954 aa12.58□□□□□ -0.4
GABRB3-208ENST00000555094 ICA1Q05084 483 aa12.58□□□□□ -0.4
GABRB3-208ENST00000555094 KANSL2Q9H9L4 492 aa12.58□□□□□ -0.4
GABRB3-208ENST00000555094 GDPD2Q9HCC8 539 aa12.58□□□□□ -0.4
GABRB3-208ENST00000555094 NYAP2Q9P242 653 aa12.58□□□□□ -0.4
GABRB3-208ENST00000555094 MTMR7Q9Y216 660 aa12.58□□□□□ -0.4
GABRB3-208ENST00000555094 UTRNP46939 3433 aa12.58□□□□□ -0.4
GABRB3-208ENST00000555094 PAPPA2Q9BXP8 1791 aa12.57□□□□□ -0.4
GABRB3-208ENST00000555094 hCG_1642624A0A1W2PR95 340 aa12.57□□□□□ -0.4
GABRB3-208ENST00000555094 PARP1P09874 1014 aaKnown RBP12.57□□□□□ -0.4
GABRB3-208ENST00000555094 GOLGA8HP0CJ92 632 aa12.57□□□□□ -0.4
GABRB3-208ENST00000555094 EEF2P13639 858 aaKnown RBP12.57□□□□□ -0.4
GABRB3-208ENST00000555094 AKAP17AQ02040 695 aaKnown RBP12.57□□□□□ -0.4
GABRB3-208ENST00000555094 TRIM29Q14134 588 aa12.57□□□□□ -0.4
GABRB3-208ENST00000555094 USP17L2Q6R6M4 530 aa12.57□□□□□ -0.4
GABRB3-208ENST00000555094 SIAH1Q8IUQ4 282 aa12.57□□□□□ -0.4
GABRB3-208ENST00000555094 APOBEC3FQ8IUX4 373 aaKnown RBP12.57□□□□□ -0.4
GABRB3-208ENST00000555094 MKL1Q969V6 931 aa12.57□□□□□ -0.4
GABRB3-208ENST00000555094 LZTS2Q9BRK4 669 aa12.57□□□□□ -0.4
GABRB3-208ENST00000555094 SPZ1Q9BXG8 430 aa12.57□□□□□ -0.4
GABRB3-208ENST00000555094 ZBTB21Q9ULJ3 1066 aa12.57□□□□□ -0.4
GABRB3-208ENST00000555094 V9GY48 417 aaPredicted RBP12.57□□□□□ -0.4
GABRB3-208ENST00000555094 POLR2AP24928 1970 aaKnown RBP12.57□□□□□ -0.4
GABRB3-208ENST00000555094 SSC5DA1L4H1 1573 aa12.56□□□□□ -0.4
GABRB3-208ENST00000555094 ZC3H4Q9UPT8 1303 aaKnown RBP12.56□□□□□ -0.4
GABRB3-208ENST00000555094 KLRF2D3W0D1 207 aa12.56□□□□□ -0.4
GABRB3-208ENST00000555094 FIBPO43427 364 aa12.56□□□□□ -0.4
GABRB3-208ENST00000555094 CYTH3O43739 400 aa12.56□□□□□ -0.4
GABRB3-208ENST00000555094 TRAK2O60296 914 aa12.56□□□□□ -0.4
GABRB3-208ENST00000555094 MMP1P03956 469 aa12.56□□□□□ -0.4
GABRB3-208ENST00000555094 NCLP19338 710 aaKnown RBP12.56□□□□□ -0.4
GABRB3-208ENST00000555094 HIRAP54198 1017 aaPredicted RBP12.56□□□□□ -0.4
GABRB3-208ENST00000555094 KRT85P78386 507 aa12.56□□□□□ -0.4
GABRB3-208ENST00000555094 ATP2B2Q01814 1243 aa12.56□□□□□ -0.4
GABRB3-208ENST00000555094 GPR162Q16538 588 aa12.56□□□□□ -0.4
GABRB3-208ENST00000555094 PFKFB3Q16875 520 aaPredicted RBP12.56□□□□□ -0.4
GABRB3-208ENST00000555094 ASPRV1Q53RT3 343 aa12.56□□□□□ -0.4
GABRB3-208ENST00000555094 ANGEL2Q5VTE6 544 aaKnown RBP12.56□□□□□ -0.4
GABRB3-208ENST00000555094 BRAPQ7Z569 592 aa12.56□□□□□ -0.4
GABRB3-208ENST00000555094 GGA3Q9NZ52 723 aa12.56□□□□□ -0.4
GABRB3-208ENST00000555094 RBM27Q9P2N5 1060 aaKnown RBP12.56□□□□□ -0.4
GABRB3-208ENST00000555094 SCN4AP35499 1836 aa12.56□□□□□ -0.4
GABRB3-208ENST00000555094 FRMPD2Q68DX3 1309 aaPredicted RBP12.55□□□□□ -0.4
GABRB3-208ENST00000555094 PRPF40AO75400 957 aaKnown RBP12.55□□□□□ -0.4
GABRB3-208ENST00000555094 SCG2P13521 617 aa12.55□□□□□ -0.4
GABRB3-208ENST00000555094 ZNF543Q08ER8 600 aa12.55□□□□□ -0.4
GABRB3-208ENST00000555094 MIGA2Q7L4E1 593 aa12.55□□□□□ -0.4
GABRB3-208ENST00000555094 USP48Q86UV5 1035 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms