RNA–Protein interactions for RNA: ENST00000554844.1

TMEM253-204, Transcript of transmembrane protein 253, humanhuman

TSL 4

Gene TMEM253, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-204ENST00000554844 PRDM5Q9NQX1 630 aaPredicted RBP11.72□□□□□ -0.53
TMEM253-204ENST00000554844 HOXC10Q9NYD6 342 aa11.72□□□□□ -0.53
TMEM253-204ENST00000554844 FLRT1Q9NZU1 646 aa11.72□□□□□ -0.53
TMEM253-204ENST00000554844 DBNLQ9UJU6 430 aaKnown RBP11.72□□□□□ -0.53
TMEM253-204ENST00000554844 TNNQ9UQP3 1299 aa11.72□□□□□ -0.53
TMEM253-204ENST00000554844 MYO5AQ9Y4I1 1855 aaKnown RBP11.72□□□□□ -0.53
TMEM253-204ENST00000554844 PLS1Q14651 629 aa11.71□□□□□ -0.53
TMEM253-204ENST00000554844 OLFML2BQ68BL8 750 aa11.71□□□□□ -0.53
TMEM253-204ENST00000554844 AACSQ86V21 672 aa11.71□□□□□ -0.53
TMEM253-204ENST00000554844 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.71□□□□□ -0.53
TMEM253-204ENST00000554844 AMOTL1Q8IY63 956 aa11.71□□□□□ -0.53
TMEM253-204ENST00000554844 MB21D1Q8N884 522 aa11.71□□□□□ -0.53
TMEM253-204ENST00000554844 ACER1Q8TDN7 264 aa11.71□□□□□ -0.53
TMEM253-204ENST00000554844 FAM161BQ96MY7 647 aa11.71□□□□□ -0.53
TMEM253-204ENST00000554844 SH2D4AQ9H788 454 aa11.71□□□□□ -0.53
TMEM253-204ENST00000554844 TLR7Q9NYK1 1049 aaKnown RBP11.71□□□□□ -0.53
TMEM253-204ENST00000554844 BTBD7Q9P203 1132 aa11.71□□□□□ -0.53
TMEM253-204ENST00000554844 NOP58Q9Y2X3 529 aaKnown RBP11.71□□□□□ -0.53
TMEM253-204ENST00000554844 NAV1Q8NEY1 1877 aa11.7□□□□□ -0.54
TMEM253-204ENST00000554844 CCER2I3L3R5 266 aa11.7□□□□□ -0.54
TMEM253-204ENST00000554844 CYBAP13498 195 aa11.7□□□□□ -0.54
TMEM253-204ENST00000554844 ADORA2AP29274 412 aa11.7□□□□□ -0.54
TMEM253-204ENST00000554844 COG2Q14746 738 aa11.7□□□□□ -0.54
TMEM253-204ENST00000554844 SEPT2Q15019 361 aa11.7□□□□□ -0.54
TMEM253-204ENST00000554844 HSP90AB4PQ58FF6 505 aa11.7□□□□□ -0.54
TMEM253-204ENST00000554844 GJC2Q5T442 439 aaPredicted RBP11.7□□□□□ -0.54
TMEM253-204ENST00000554844 NCAPG2Q86XI2 1143 aa11.7□□□□□ -0.54
TMEM253-204ENST00000554844 SHCBP1Q8NEM2 672 aa11.7□□□□□ -0.54
TMEM253-204ENST00000554844 NPLOC4Q8TAT6 608 aa11.7□□□□□ -0.54
TMEM253-204ENST00000554844 ARHGEF10LQ9HCE6 1279 aa11.7□□□□□ -0.54
TMEM253-204ENST00000554844 MCM9Q9NXL9 1143 aa11.7□□□□□ -0.54
TMEM253-204ENST00000554844 SEPT4O43236 478 aa11.69□□□□□ -0.54
TMEM253-204ENST00000554844 SHMT1P34896 483 aa11.69□□□□□ -0.54
TMEM253-204ENST00000554844 TMEM179Q6ZVK1 233 aa11.69□□□□□ -0.54
TMEM253-204ENST00000554844 EAF2Q96CJ1 260 aaPredicted RBP11.69□□□□□ -0.54
TMEM253-204ENST00000554844 DDRGK1Q96HY6 314 aa11.69□□□□□ -0.54
TMEM253-204ENST00000554844 MOV10L1Q9BXT6 1211 aaKnown RBP11.69□□□□□ -0.54
TMEM253-204ENST00000554844 SPATC1LQ9H0A9 340 aa11.69□□□□□ -0.54
TMEM253-204ENST00000554844 MROH8Q9H579 483 aa11.69□□□□□ -0.54
TMEM253-204ENST00000554844 SWAP70Q9UH65 585 aa11.69□□□□□ -0.54
TMEM253-204ENST00000554844 A0A0C4DFX4 3053 aa11.69□□□□□ -0.54
TMEM253-204ENST00000554844 ZNF236Q9UL36 1845 aa11.68□□□□□ -0.54
TMEM253-204ENST00000554844 POTEB2H3BUK9 544 aa11.68□□□□□ -0.54
TMEM253-204ENST00000554844 FLOT1O75955 427 aa11.68□□□□□ -0.54
TMEM253-204ENST00000554844 ERCC3P19447 782 aa11.68□□□□□ -0.54
TMEM253-204ENST00000554844 PLCD1P51178 756 aa11.68□□□□□ -0.54
TMEM253-204ENST00000554844 SLC9C2Q5TAH2 1124 aa11.68□□□□□ -0.54
TMEM253-204ENST00000554844 ANO1Q5XXA6 986 aa11.68□□□□□ -0.54
TMEM253-204ENST00000554844 POTEEQ6S8J3 1075 aa11.68□□□□□ -0.54
TMEM253-204ENST00000554844 SLC39A5Q6ZMH5 540 aa11.68□□□□□ -0.54
TMEM253-204ENST00000554844 FCER1AP12319 257 aa11.67□□□□□ -0.54
TMEM253-204ENST00000554844 ICA1Q05084 483 aa11.67□□□□□ -0.54
TMEM253-204ENST00000554844 TRIM60Q495X7 471 aa11.67□□□□□ -0.54
TMEM253-204ENST00000554844 ABRAQ8N0Z2 381 aa11.67□□□□□ -0.54
TMEM253-204ENST00000554844 TRPV1Q8NER1 839 aa11.67□□□□□ -0.54
TMEM253-204ENST00000554844 GUCD1Q96NT3 240 aa11.67□□□□□ -0.54
TMEM253-204ENST00000554844 DNAJC2Q99543 621 aaKnown RBP11.67□□□□□ -0.54
TMEM253-204ENST00000554844 RIOK1Q9BRS2 568 aaKnown RBP11.67□□□□□ -0.54
TMEM253-204ENST00000554844 COL25A1Q9BXS0 654 aaPredicted RBP11.67□□□□□ -0.54
TMEM253-204ENST00000554844 ANTXR1Q9H6X2 564 aa11.67□□□□□ -0.54
TMEM253-204ENST00000554844 EXOC6BQ9Y2D4 811 aa11.67□□□□□ -0.54
TMEM253-204ENST00000554844 RAD21O60216 631 aa11.66□□□□□ -0.54
TMEM253-204ENST00000554844 SLC25A27O95847 323 aa11.66□□□□□ -0.54
TMEM253-204ENST00000554844 IFIT2P09913 472 aaKnown RBP11.66□□□□□ -0.54
TMEM253-204ENST00000554844 RARBP10826 455 aa11.66□□□□□ -0.54
TMEM253-204ENST00000554844 PDE6AP16499 860 aa11.66□□□□□ -0.54
TMEM253-204ENST00000554844 GUCY1A2P33402 732 aa11.66□□□□□ -0.54
TMEM253-204ENST00000554844 ADCYAP1R1P41586 468 aa11.66□□□□□ -0.54
TMEM253-204ENST00000554844 RNF180Q86T96 592 aa11.66□□□□□ -0.54
TMEM253-204ENST00000554844 CLASRPQ8N2M8 674 aaKnown RBP11.66□□□□□ -0.54
TMEM253-204ENST00000554844 MAFAQ8NHW3 353 aaPredicted RBP11.66□□□□□ -0.54
TMEM253-204ENST00000554844 BADQ92934 168 aa11.66□□□□□ -0.54
TMEM253-204ENST00000554844 FERMT2Q96AC1 680 aa11.66□□□□□ -0.54
TMEM253-204ENST00000554844 MMP19Q99542 508 aa11.66□□□□□ -0.54
TMEM253-204ENST00000554844 BCL11AQ9H165 835 aa11.66□□□□□ -0.54
TMEM253-204ENST00000554844 MYH8P13535 1937 aa11.66□□□□□ -0.54
TMEM253-204ENST00000554844 LTBP2Q14767 1821 aa11.65□□□□□ -0.54
TMEM253-204ENST00000554844 ZNF532Q9HCE3 1301 aa11.65□□□□□ -0.54
TMEM253-204ENST00000554844 GOLIM4O00461 696 aa11.65□□□□□ -0.54
TMEM253-204ENST00000554844 WDR46O15213 610 aaKnown RBP11.65□□□□□ -0.54
TMEM253-204ENST00000554844 COPB2P35606 906 aa11.65□□□□□ -0.54
TMEM253-204ENST00000554844 SMAD3P84022 425 aaKnown RBP11.65□□□□□ -0.54
TMEM253-204ENST00000554844 GABPAQ06546 454 aa11.65□□□□□ -0.54
TMEM253-204ENST00000554844 KCTD2Q14681 263 aa11.65□□□□□ -0.54
TMEM253-204ENST00000554844 LRRC41Q15345 812 aa11.65□□□□□ -0.54
TMEM253-204ENST00000554844 SHHQ15465 462 aa11.65□□□□□ -0.54
TMEM253-204ENST00000554844 CEP85Q6P2H3 762 aa11.65□□□□□ -0.54
TMEM253-204ENST00000554844 SPICE1Q8N0Z3 855 aa11.65□□□□□ -0.54
TMEM253-204ENST00000554844 SDR42E1Q8WUS8 393 aa11.65□□□□□ -0.54
TMEM253-204ENST00000554844 ATG4CQ96DT6 458 aa11.65□□□□□ -0.54
TMEM253-204ENST00000554844 MAML3Q96JK9 1138 aa11.65□□□□□ -0.54
TMEM253-204ENST00000554844 CCDC17Q96LX7 622 aa11.65□□□□□ -0.54
TMEM253-204ENST00000554844 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.65□□□□□ -0.54
TMEM253-204ENST00000554844 IL1RAPL2Q9NP60 686 aa11.65□□□□□ -0.54
TMEM253-204ENST00000554844 XPNPEP3Q9NQH7 507 aa11.65□□□□□ -0.54
TMEM253-204ENST00000554844 PDLIM7Q9NR12 457 aa11.65□□□□□ -0.54
TMEM253-204ENST00000554844 NRBP1Q9UHY1 535 aa11.65□□□□□ -0.54
TMEM253-204ENST00000554844 TACC3Q9Y6A5 838 aa11.65□□□□□ -0.54
TMEM253-204ENST00000554844 RLFQ13129 1914 aa11.64□□□□□ -0.55
TMEM253-204ENST00000554844 A0A0G2JMZ2 1700 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms