RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 RETREG2Q8NC44 543 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 PDZD8Q8NEN9 1154 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 DPH5Q9H2P9 285 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 DDX21Q9NR30 783 aaKnown RBP eCLIP3.66□□□□□ -1.82
SYNE2-212ENST00000554584 CCDC196A0A1B0GTZ2 297 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 A0A1B0GUL7 405 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 IRS4O14654 1257 aaPredicted RBP3.66□□□□□ -1.82
SYNE2-212ENST00000554584 SPOPO43791 374 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 RNF8O76064 485 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 MIIPQ5JXC2 388 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 BEND3Q5T5X7 828 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 TRPC7Q9HCX4 862 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 ANGPTL3Q9Y5C1 460 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 LINC00854A0A1B0GVQ3 168 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 PCK1P35558 622 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 IFIT1BQ5T764 474 aaKnown RBP3.66□□□□□ -1.82
SYNE2-212ENST00000554584 C1orf228Q6PIY5 440 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 ZC3H12CQ9C0D7 883 aaKnown RBP3.66□□□□□ -1.82
SYNE2-212ENST00000554584 PCIF1Q9H4Z3 704 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 TOM1O60784 492 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 S100BP04271 92 aaPredicted RBP3.66□□□□□ -1.82
SYNE2-212ENST00000554584 MCM4P33991 863 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 NFX1Q12986 1120 aaKnown RBP3.66□□□□□ -1.82
SYNE2-212ENST00000554584 KIAA0753Q2KHM9 967 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 SYNE4Q8N205 404 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 PAPOLBQ9NRJ5 636 aaKnown RBP3.66□□□□□ -1.82
SYNE2-212ENST00000554584 STK38LQ9Y2H1 464 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 ITIH3Q06033 890 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 B4E1Z4 1266 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 SARNPP82979 210 aaKnown RBP3.66□□□□□ -1.82
SYNE2-212ENST00000554584 MAP3K11Q16584 847 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 PAN2Q504Q3 1202 aaKnown RBP3.66□□□□□ -1.82
SYNE2-212ENST00000554584 RSRC2Q7L4I2 434 aaKnown RBP3.66□□□□□ -1.82
SYNE2-212ENST00000554584 HAUS1Q96CS2 278 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 SEC31BQ9NQW1 1179 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 PCDH10Q9P2E7 1040 aa3.66□□□□□ -1.82
SYNE2-212ENST00000554584 XPOTO43592 962 aaKnown RBP3.65□□□□□ -1.82
SYNE2-212ENST00000554584 KRT81Q14533 505 aa3.65□□□□□ -1.82
SYNE2-212ENST00000554584 FAM102BQ5T8I3 360 aa3.65□□□□□ -1.82
SYNE2-212ENST00000554584 NBPF10Q6P3W6 841 aaKnown RBP3.65□□□□□ -1.82
SYNE2-212ENST00000554584 UTS2BQ765I0 119 aa3.65□□□□□ -1.82
SYNE2-212ENST00000554584 RUFY3Q7L099 469 aa3.65□□□□□ -1.82
SYNE2-212ENST00000554584 CCDC186Q7Z3E2 898 aa3.65□□□□□ -1.82
SYNE2-212ENST00000554584 CATIPQ7Z7H3 387 aa3.65□□□□□ -1.82
SYNE2-212ENST00000554584 RNF135Q8IUD6 432 aa3.65□□□□□ -1.82
SYNE2-212ENST00000554584 IFT122Q9HBG6 1241 aa3.65□□□□□ -1.82
SYNE2-212ENST00000554584 NLRC4Q9NPP4 1024 aa3.65□□□□□ -1.82
SYNE2-212ENST00000554584 GSTA4O15217 222 aa3.65□□□□□ -1.82
SYNE2-212ENST00000554584 TRPA1O75762 1119 aa3.65□□□□□ -1.82
SYNE2-212ENST00000554584 U2AF2P26368 475 aaKnown RBP eCLIP3.65□□□□□ -1.82
SYNE2-212ENST00000554584 PLCB4Q15147 1175 aa3.65□□□□□ -1.82
SYNE2-212ENST00000554584 ZC3H12BQ5HYM0 836 aaKnown RBP3.65□□□□□ -1.82
SYNE2-212ENST00000554584 TRIML1Q8N9V2 468 aa3.65□□□□□ -1.82
SYNE2-212ENST00000554584 PPP4R1Q8TF05 950 aa3.65□□□□□ -1.82
SYNE2-212ENST00000554584 ELMO3Q96BJ8 720 aa3.65□□□□□ -1.82
SYNE2-212ENST00000554584 RRAGDQ9NQL2 400 aaPredicted RBP3.65□□□□□ -1.82
SYNE2-212ENST00000554584 INTUQ9ULD6 942 aa3.65□□□□□ -1.82
SYNE2-212ENST00000554584 PRKAB1Q9Y478 270 aa3.65□□□□□ -1.82
SYNE2-212ENST00000554584 IFNB1P01574 187 aa3.65□□□□□ -1.82
SYNE2-212ENST00000554584 ZNF18P17022 549 aa3.65□□□□□ -1.82
SYNE2-212ENST00000554584 GNG11P61952 73 aa3.65□□□□□ -1.82
SYNE2-212ENST00000554584 DEFB132Q7Z7B7 95 aa3.65□□□□□ -1.82
SYNE2-212ENST00000554584 WDR63Q8IWG1 891 aa3.65□□□□□ -1.82
SYNE2-212ENST00000554584 PRPF6O94906 941 aaKnown RBP3.65□□□□□ -1.82
SYNE2-212ENST00000554584 MKRN4PQ13434 485 aaPredicted RBP3.65□□□□□ -1.82
SYNE2-212ENST00000554584 CCDC85BQ15834 202 aaPredicted RBP3.65□□□□□ -1.82
SYNE2-212ENST00000554584 SLC9C2Q5TAH2 1124 aa3.65□□□□□ -1.82
SYNE2-212ENST00000554584 RD3Q7Z3Z2 195 aa3.65□□□□□ -1.82
SYNE2-212ENST00000554584 ARHGEF2Q92974 986 aaKnown RBP3.65□□□□□ -1.82
SYNE2-212ENST00000554584 FAM95CA0A1B0GW59 222 aa3.65□□□□□ -1.82
SYNE2-212ENST00000554584 M0R2C6 588 aa3.65□□□□□ -1.82
SYNE2-212ENST00000554584 C8orf58Q8NAV2 365 aa3.65□□□□□ -1.82
SYNE2-212ENST00000554584 SSH1Q8WYL5 1049 aa3.65□□□□□ -1.82
SYNE2-212ENST00000554584 NEUROG2Q9H2A3 272 aa3.65□□□□□ -1.82
SYNE2-212ENST00000554584 POLKQ9UBT6 870 aa3.65□□□□□ -1.82
SYNE2-212ENST00000554584 NIM1KQ8IY84 436 aa3.65□□□□□ -1.82
SYNE2-212ENST00000554584 PHKBQ93100 1093 aa3.65□□□□□ -1.82
SYNE2-212ENST00000554584 TBC1D31Q96DN5 1066 aa3.65□□□□□ -1.82
SYNE2-212ENST00000554584 CRNKL1Q9BZJ0 848 aaKnown RBP3.65□□□□□ -1.82
SYNE2-212ENST00000554584 PRKRIP1Q9H875 184 aaPredicted RBP3.65□□□□□ -1.82
SYNE2-212ENST00000554584 SCN1AP35498 2009 aa3.65□□□□□ -1.82
SYNE2-212ENST00000554584 ACEP12821 1306 aa3.65□□□□□ -1.82
SYNE2-212ENST00000554584 RAPGEF2Q9Y4G8 1499 aa3.65□□□□□ -1.82
SYNE2-212ENST00000554584 WDR75Q8IWA0 830 aaKnown RBP3.65□□□□□ -1.83
SYNE2-212ENST00000554584 C7orf31Q8N865 590 aa3.65□□□□□ -1.83
SYNE2-212ENST00000554584 VPS16Q9H269 839 aa3.65□□□□□ -1.83
SYNE2-212ENST00000554584 DSEQ9UL01 958 aa3.65□□□□□ -1.83
SYNE2-212ENST00000554584 GUCA1BQ9UMX6 200 aa3.65□□□□□ -1.83
SYNE2-212ENST00000554584 A0A1B0GUA9 196 aa3.65□□□□□ -1.83
SYNE2-212ENST00000554584 CYP4A11Q02928 519 aa3.65□□□□□ -1.83
SYNE2-212ENST00000554584 IQCB1Q15051 598 aa3.65□□□□□ -1.83
SYNE2-212ENST00000554584 RNF19BQ6ZMZ0 732 aa3.65□□□□□ -1.83
SYNE2-212ENST00000554584 SH3BP5LQ7L8J4 393 aa3.65□□□□□ -1.83
SYNE2-212ENST00000554584 USP37Q86T82 979 aa3.65□□□□□ -1.83
SYNE2-212ENST00000554584 YAF2Q8IY57 180 aa3.65□□□□□ -1.83
SYNE2-212ENST00000554584 CCDC155Q8N6L0 562 aa3.65□□□□□ -1.83
SYNE2-212ENST00000554584 MSANTD4Q8NCY6 345 aa3.65□□□□□ -1.83
SYNE2-212ENST00000554584 GPKOWQ92917 476 aaPredicted RBP eCLIP3.65□□□□□ -1.83
SYNE2-212ENST00000554584 CASQ2O14958 399 aaPredicted RBP3.65□□□□□ -1.83
SYNE2-212ENST00000554584 USP33Q8TEY7 942 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms