RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 PPP2R5BQ15173 497 aa17.84■□□□□ 0.45
ARHGEF40-203ENST00000554514 FAM182BQ5T319 152 aa17.84■□□□□ 0.45
ARHGEF40-203ENST00000554514 TRIML1Q8N9V2 468 aa17.84■□□□□ 0.45
ARHGEF40-203ENST00000554514 NLRP3Q96P20 1036 aa17.84■□□□□ 0.45
ARHGEF40-203ENST00000554514 CARD6Q9BX69 1037 aa17.84■□□□□ 0.45
ARHGEF40-203ENST00000554514 CTNND2Q9UQB3 1225 aa17.84■□□□□ 0.45
ARHGEF40-203ENST00000554514 THRAP3Q9Y2W1 955 aaKnown RBP17.84■□□□□ 0.45
ARHGEF40-203ENST00000554514 CALM1P0DP23 149 aa17.83■□□□□ 0.45
ARHGEF40-203ENST00000554514 CALM2P0DP24 149 aa17.83■□□□□ 0.45
ARHGEF40-203ENST00000554514 CALM3P0DP25 149 aa17.83■□□□□ 0.45
ARHGEF40-203ENST00000554514 DMTNQ08495 405 aa17.83■□□□□ 0.45
ARHGEF40-203ENST00000554514 TBX2Q13207 712 aaPredicted RBP17.83■□□□□ 0.45
ARHGEF40-203ENST00000554514 NPY5RQ15761 445 aa17.83■□□□□ 0.45
ARHGEF40-203ENST00000554514 CCDC93Q567U6 631 aa17.83■□□□□ 0.45
ARHGEF40-203ENST00000554514 FBXO33Q7Z6M2 555 aa17.83■□□□□ 0.45
ARHGEF40-203ENST00000554514 ELOA2Q8IYF1 753 aaPredicted RBP17.83■□□□□ 0.45
ARHGEF40-203ENST00000554514 SETDB2Q96T68 719 aa17.83■□□□□ 0.45
ARHGEF40-203ENST00000554514 MAPK8IP1Q9UQF2 711 aa17.83■□□□□ 0.45
ARHGEF40-203ENST00000554514 MYO1BO43795 1136 aa17.83■□□□□ 0.44
ARHGEF40-203ENST00000554514 CCT6AP40227 531 aaKnown RBP17.83■□□□□ 0.44
ARHGEF40-203ENST00000554514 DZIP1Q86YF9 867 aaKnown RBP17.83■□□□□ 0.44
ARHGEF40-203ENST00000554514 DYNLL2Q96FJ2 89 aa17.83■□□□□ 0.44
ARHGEF40-203ENST00000554514 WDR24Q96S15 920 aa17.83■□□□□ 0.44
ARHGEF40-203ENST00000554514 EPC1Q9H2F5 836 aa17.83■□□□□ 0.44
ARHGEF40-203ENST00000554514 PRDM4Q9UKN5 801 aa17.83■□□□□ 0.44
ARHGEF40-203ENST00000554514 SPATA31A5Q5VU36 1347 aa17.83■□□□□ 0.44
ARHGEF40-203ENST00000554514 SPATA31A7Q8IWB4 1347 aa17.83■□□□□ 0.44
ARHGEF40-203ENST00000554514 SOWAHDA6NJG2 315 aa17.82■□□□□ 0.44
ARHGEF40-203ENST00000554514 DDAH1O94760 285 aa17.82■□□□□ 0.44
ARHGEF40-203ENST00000554514 SCG2P13521 617 aa17.82■□□□□ 0.44
ARHGEF40-203ENST00000554514 PIP4K2BP78356 416 aa17.82■□□□□ 0.44
ARHGEF40-203ENST00000554514 FERMT2Q96AC1 680 aa17.82■□□□□ 0.44
ARHGEF40-203ENST00000554514 PHLPP2Q6ZVD8 1323 aa17.82■□□□□ 0.44
ARHGEF40-203ENST00000554514 NR1I3Q14994 352 aa17.82■□□□□ 0.44
ARHGEF40-203ENST00000554514 IGSF22Q8N9C0 903 aa17.82■□□□□ 0.44
ARHGEF40-203ENST00000554514 UBXN4Q92575 508 aa17.82■□□□□ 0.44
ARHGEF40-203ENST00000554514 GPR101Q96P66 508 aaPredicted RBP17.82■□□□□ 0.44
ARHGEF40-203ENST00000554514 LZTFL1Q9NQ48 299 aa17.82■□□□□ 0.44
ARHGEF40-203ENST00000554514 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.82■□□□□ 0.44
ARHGEF40-203ENST00000554514 WNK3Q9BYP7 1800 aa17.81■□□□□ 0.44
ARHGEF40-203ENST00000554514 GNPATO15228 680 aa17.81■□□□□ 0.44
ARHGEF40-203ENST00000554514 CASQ1P31415 396 aa17.81■□□□□ 0.44
ARHGEF40-203ENST00000554514 RBL2Q08999 1139 aa17.81■□□□□ 0.44
ARHGEF40-203ENST00000554514 DPYDQ12882 1025 aa17.81■□□□□ 0.44
ARHGEF40-203ENST00000554514 SPATA20Q8TB22 786 aa17.81■□□□□ 0.44
ARHGEF40-203ENST00000554514 IRX2Q9BZI1 471 aaPredicted RBP17.81■□□□□ 0.44
ARHGEF40-203ENST00000554514 ERCC5P28715 1186 aaPredicted RBP17.81■□□□□ 0.44
ARHGEF40-203ENST00000554514 USP5P45974 858 aa17.81■□□□□ 0.44
ARHGEF40-203ENST00000554514 TFAP4Q01664 338 aa17.81■□□□□ 0.44
ARHGEF40-203ENST00000554514 SPATA1Q5VX52 437 aa17.81■□□□□ 0.44
ARHGEF40-203ENST00000554514 RRAGBQ5VZM2 374 aa17.81■□□□□ 0.44
ARHGEF40-203ENST00000554514 PPFIBP1Q86W92 1011 aa17.81■□□□□ 0.44
ARHGEF40-203ENST00000554514 TNFRSF25Q93038 417 aa17.81■□□□□ 0.44
ARHGEF40-203ENST00000554514 PLIN2Q99541 437 aa17.81■□□□□ 0.44
ARHGEF40-203ENST00000554514 ZNF446Q9NWS9 450 aa17.81■□□□□ 0.44
ARHGEF40-203ENST00000554514 A0A0U1RQJ8 604 aa17.8■□□□□ 0.44
ARHGEF40-203ENST00000554514 STX10O60499 249 aa17.8■□□□□ 0.44
ARHGEF40-203ENST00000554514 ZPR1O75312 459 aa17.8■□□□□ 0.44
ARHGEF40-203ENST00000554514 CUL4BQ13620 913 aa17.8■□□□□ 0.44
ARHGEF40-203ENST00000554514 STAG2Q8N3U4 1231 aa17.8■□□□□ 0.44
ARHGEF40-203ENST00000554514 RASSF8Q8NHQ8 419 aa17.8■□□□□ 0.44
ARHGEF40-203ENST00000554514 ATRIPQ8WXE1 791 aa17.8■□□□□ 0.44
ARHGEF40-203ENST00000554514 KAT14Q9H8E8 782 aa17.8■□□□□ 0.44
ARHGEF40-203ENST00000554514 ST7Q9NRC1 585 aa17.8■□□□□ 0.44
ARHGEF40-203ENST00000554514 AKR1B15C9JRZ8 316 aaPredicted RBP17.8■□□□□ 0.44
ARHGEF40-203ENST00000554514 IL17AQ16552 155 aa17.8■□□□□ 0.44
ARHGEF40-203ENST00000554514 ANKIB1Q9P2G1 1089 aa17.8■□□□□ 0.44
ARHGEF40-203ENST00000554514 PARP3Q9Y6F1 533 aa17.8■□□□□ 0.44
ARHGEF40-203ENST00000554514 XDHP47989 1333 aa17.8■□□□□ 0.44
ARHGEF40-203ENST00000554514 A0A1B0GTH6 734 aa17.79■□□□□ 0.44
ARHGEF40-203ENST00000554514 ATP2C1P98194 919 aaPredicted RBP17.79■□□□□ 0.44
ARHGEF40-203ENST00000554514 DIXDC1Q155Q3 683 aa17.79■□□□□ 0.44
ARHGEF40-203ENST00000554514 USP17L3A6NCW0 530 aa17.79■□□□□ 0.44
ARHGEF40-203ENST00000554514 USP17L4A6NCW7 530 aa17.79■□□□□ 0.44
ARHGEF40-203ENST00000554514 PPP1R3GB7ZBB8 358 aa17.79■□□□□ 0.44
ARHGEF40-203ENST00000554514 USP17L1Q7RTZ2 530 aa17.79■□□□□ 0.44
ARHGEF40-203ENST00000554514 SH3RF1Q7Z6J0 888 aa17.79■□□□□ 0.44
ARHGEF40-203ENST00000554514 MRPL44Q9H9J2 332 aaKnown RBP17.79■□□□□ 0.44
ARHGEF40-203ENST00000554514 FGRP09769 529 aa17.78■□□□□ 0.44
ARHGEF40-203ENST00000554514 CLCN6P51797 869 aa17.78■□□□□ 0.44
ARHGEF40-203ENST00000554514 SLC44A5Q8NCS7 719 aa17.78■□□□□ 0.44
ARHGEF40-203ENST00000554514 VPS16Q9H269 839 aa17.78■□□□□ 0.44
ARHGEF40-203ENST00000554514 ZSWIM4Q9H7M6 989 aa17.78■□□□□ 0.44
ARHGEF40-203ENST00000554514 MKNK2Q9HBH9 465 aa17.78■□□□□ 0.44
ARHGEF40-203ENST00000554514 ATP8A2Q9NTI2 1148 aa17.78■□□□□ 0.44
ARHGEF40-203ENST00000554514 SAP30BPQ9UHR5 308 aaKnown RBP17.78■□□□□ 0.44
ARHGEF40-203ENST00000554514 MORC2Q9Y6X9 1032 aaPredicted RBP17.78■□□□□ 0.44
ARHGEF40-203ENST00000554514 FAM205AQ6ZU69 1335 aa17.78■□□□□ 0.44
ARHGEF40-203ENST00000554514 ORC4O43929 436 aa17.78■□□□□ 0.44
ARHGEF40-203ENST00000554514 BMP15O95972 392 aa17.78■□□□□ 0.44
ARHGEF40-203ENST00000554514 PFKFB3Q16875 520 aaPredicted RBP17.78■□□□□ 0.44
ARHGEF40-203ENST00000554514 FCHSD1Q86WN1 690 aa17.78■□□□□ 0.44
ARHGEF40-203ENST00000554514 KRT222Q8N1A0 295 aa17.78■□□□□ 0.44
ARHGEF40-203ENST00000554514 IQUBQ8NA54 791 aa17.78■□□□□ 0.44
ARHGEF40-203ENST00000554514 ARPP21Q9UBL0 812 aaPredicted RBP17.78■□□□□ 0.44
ARHGEF40-203ENST00000554514 LAMB2P55268 1798 aa17.78■□□□□ 0.44
ARHGEF40-203ENST00000554514 CASP14P31944 242 aa17.78■□□□□ 0.44
ARHGEF40-203ENST00000554514 RCSD1Q6JBY9 416 aa17.78■□□□□ 0.44
ARHGEF40-203ENST00000554514 RASGRP2Q7LDG7 609 aa17.78■□□□□ 0.44
ARHGEF40-203ENST00000554514 AMIGO3Q86WK7 504 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms