RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 CERKLQ49MI3 558 aaPredicted RBP15.84■□□□□ 0.13
VPS29-211ENST00000553128 MIGA1Q8NAN2 632 aa15.84■□□□□ 0.13
VPS29-211ENST00000553128 TIFAQ96CG3 184 aa15.84■□□□□ 0.13
VPS29-211ENST00000553128 SPATC1LQ9H0A9 340 aa15.84■□□□□ 0.13
VPS29-211ENST00000553128 CHD7Q9P2D1 2997 aa15.84■□□□□ 0.13
VPS29-211ENST00000553128 PHF24Q9UPV7 400 aa15.84■□□□□ 0.13
VPS29-211ENST00000553128 PNMA6EA0A0J9YXQ4 647 aa15.83■□□□□ 0.12
VPS29-211ENST00000553128 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.83■□□□□ 0.12
VPS29-211ENST00000553128 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.83■□□□□ 0.12
VPS29-211ENST00000553128 A0A1W2PRG0 241 aa15.83■□□□□ 0.12
VPS29-211ENST00000553128 GRXCR1A8MXD5 290 aa15.83■□□□□ 0.12
VPS29-211ENST00000553128 STRNO43815 780 aa15.83■□□□□ 0.12
VPS29-211ENST00000553128 PGK1P00558 417 aa15.83■□□□□ 0.12
VPS29-211ENST00000553128 SHMT1P34896 483 aa15.83■□□□□ 0.12
VPS29-211ENST00000553128 ZAP70P43403 619 aa15.83■□□□□ 0.12
VPS29-211ENST00000553128 EVX2Q03828 476 aa15.83■□□□□ 0.12
VPS29-211ENST00000553128 KIAA1755Q5JYT7 1200 aa15.83■□□□□ 0.12
VPS29-211ENST00000553128 ATF7IPQ6VMQ6 1270 aa15.83■□□□□ 0.12
VPS29-211ENST00000553128 ADAMTS19Q8TE59 1207 aa15.83■□□□□ 0.12
VPS29-211ENST00000553128 LENG1Q96BZ8 264 aaPredicted RBP15.83■□□□□ 0.12
VPS29-211ENST00000553128 MAML3Q96JK9 1138 aa15.83■□□□□ 0.12
VPS29-211ENST00000553128 DBNDD2Q9BQY9 259 aa15.83■□□□□ 0.12
VPS29-211ENST00000553128 SERPINB13Q9UIV8 391 aa15.83■□□□□ 0.12
VPS29-211ENST00000553128 HDAC5Q9UQL6 1122 aa15.83■□□□□ 0.12
VPS29-211ENST00000553128 A0A1W2PQ45 241 aaPredicted RBP15.82■□□□□ 0.12
VPS29-211ENST00000553128 A0A1W2PQY0 241 aa15.82■□□□□ 0.12
VPS29-211ENST00000553128 TAL1P17542 331 aaPredicted RBP15.82■□□□□ 0.12
VPS29-211ENST00000553128 FAAP100Q0VG06 881 aa15.82■□□□□ 0.12
VPS29-211ENST00000553128 SEPT2Q15019 361 aa15.82■□□□□ 0.12
VPS29-211ENST00000553128 TTC39AQ5SRH9 613 aa15.82■□□□□ 0.12
VPS29-211ENST00000553128 ASB2Q96Q27 587 aa15.82■□□□□ 0.12
VPS29-211ENST00000553128 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.82■□□□□ 0.12
VPS29-211ENST00000553128 API5Q9BZZ5 524 aaKnown RBP15.82■□□□□ 0.12
VPS29-211ENST00000553128 PRDM12Q9H4Q4 367 aa15.82■□□□□ 0.12
VPS29-211ENST00000553128 XPNPEP3Q9NQH7 507 aa15.82■□□□□ 0.12
VPS29-211ENST00000553128 TMEM39AQ9NV64 488 aa15.82■□□□□ 0.12
VPS29-211ENST00000553128 A0A0G2JMZ2 1700 aa15.81■□□□□ 0.12
VPS29-211ENST00000553128 ANP32CO43423 234 aa15.81■□□□□ 0.12
VPS29-211ENST00000553128 MYH1P12882 1939 aa15.81■□□□□ 0.12
VPS29-211ENST00000553128 CYP7A1P22680 504 aa15.81■□□□□ 0.12
VPS29-211ENST00000553128 PLCD1P51178 756 aa15.81■□□□□ 0.12
VPS29-211ENST00000553128 ADGRE1Q14246 886 aa15.81■□□□□ 0.12
VPS29-211ENST00000553128 COG2Q14746 738 aa15.81■□□□□ 0.12
VPS29-211ENST00000553128 CCDC85BQ15834 202 aaPredicted RBP15.81■□□□□ 0.12
VPS29-211ENST00000553128 C16orf59Q7L2K0 433 aa15.81■□□□□ 0.12
VPS29-211ENST00000553128 SHCBP1Q8NEM2 672 aa15.81■□□□□ 0.12
VPS29-211ENST00000553128 ATXN2LQ8WWM7 1075 aaKnown RBP15.81■□□□□ 0.12
VPS29-211ENST00000553128 FAM122AQ96E09 287 aa15.81■□□□□ 0.12
VPS29-211ENST00000553128 PBX4Q9BYU1 374 aa15.81■□□□□ 0.12
VPS29-211ENST00000553128 EHD4Q9H223 541 aa15.81■□□□□ 0.12
VPS29-211ENST00000553128 USP5P45974 858 aa15.8■□□□□ 0.12
VPS29-211ENST00000553128 MAP3K12Q12852 859 aa15.8■□□□□ 0.12
VPS29-211ENST00000553128 G3BP1Q13283 466 aaKnown RBP eCLIP15.8■□□□□ 0.12
VPS29-211ENST00000553128 PLS1Q14651 629 aa15.8■□□□□ 0.12
VPS29-211ENST00000553128 NCAPG2Q86XI2 1143 aa15.8■□□□□ 0.12
VPS29-211ENST00000553128 UHRF1Q96T88 793 aaPredicted RBP15.8■□□□□ 0.12
VPS29-211ENST00000553128 TANGO6Q9C0B7 1094 aa15.8■□□□□ 0.12
VPS29-211ENST00000553128 THEGQ9P2T0 379 aa15.8■□□□□ 0.12
VPS29-211ENST00000553128 SMCHD1A6NHR9 2005 aa15.8■□□□□ 0.12
VPS29-211ENST00000553128 BDP1A6H8Y1 2624 aa15.79■□□□□ 0.12
VPS29-211ENST00000553128 PGK2P07205 417 aa15.79■□□□□ 0.12
VPS29-211ENST00000553128 GNAI3P08754 354 aa15.79■□□□□ 0.12
VPS29-211ENST00000553128 RARBP10826 455 aa15.79■□□□□ 0.12
VPS29-211ENST00000553128 TNNI3KQ59H18 835 aa15.79■□□□□ 0.12
VPS29-211ENST00000553128 ATG4CQ96DT6 458 aa15.79■□□□□ 0.12
VPS29-211ENST00000553128 NECAB3Q96P71 396 aaPredicted RBP15.79■□□□□ 0.12
VPS29-211ENST00000553128 GAS2L1Q99501 681 aaPredicted RBP15.79■□□□□ 0.12
VPS29-211ENST00000553128 CABP5Q9NP86 173 aa15.79■□□□□ 0.12
VPS29-211ENST00000553128 HOXC10Q9NYD6 342 aa15.79■□□□□ 0.12
VPS29-211ENST00000553128 FPGT-TNNI3KV9GXZ4 949 aa15.79■□□□□ 0.12
VPS29-211ENST00000553128 DSG3P32926 999 aa15.78■□□□□ 0.12
VPS29-211ENST00000553128 CCDC158Q5M9N0 1113 aa15.78■□□□□ 0.12
VPS29-211ENST00000553128 TMEM240Q5SV17 173 aa15.78■□□□□ 0.12
VPS29-211ENST00000553128 AKNAD1Q5T1N1 836 aa15.78■□□□□ 0.12
VPS29-211ENST00000553128 ANKRD33Q7Z3H0 272 aa15.78■□□□□ 0.12
VPS29-211ENST00000553128 RNF180Q86T96 592 aa15.78■□□□□ 0.12
VPS29-211ENST00000553128 ABRAQ8N0Z2 381 aa15.78■□□□□ 0.12
VPS29-211ENST00000553128 SLC44A5Q8NCS7 719 aa15.78■□□□□ 0.12
VPS29-211ENST00000553128 TLR7Q9NYK1 1049 aaKnown RBP15.78■□□□□ 0.12
VPS29-211ENST00000553128 TNNQ9UQP3 1299 aa15.78■□□□□ 0.12
VPS29-211ENST00000553128 ADAMTS4O75173 837 aa15.77■□□□□ 0.12
VPS29-211ENST00000553128 IDH1O75874 414 aaKnown RBP15.77■□□□□ 0.12
VPS29-211ENST00000553128 TIMP1P01033 207 aa15.77■□□□□ 0.12
VPS29-211ENST00000553128 ZNF865P0CJ78 1059 aaPredicted RBP15.77■□□□□ 0.12
VPS29-211ENST00000553128 IRX5P78411 483 aaPredicted RBP15.77■□□□□ 0.12
VPS29-211ENST00000553128 MRPS5P82675 430 aaKnown RBP15.77■□□□□ 0.12
VPS29-211ENST00000553128 GABPAQ06546 454 aa15.77■□□□□ 0.12
VPS29-211ENST00000553128 RASIP1Q5U651 963 aa15.77■□□□□ 0.12
VPS29-211ENST00000553128 SAMD1Q6SPF0 538 aaPredicted RBP15.77■□□□□ 0.12
VPS29-211ENST00000553128 CCDC129Q6ZRS4 1044 aa15.77■□□□□ 0.12
VPS29-211ENST00000553128 CLEC10AQ8IUN9 316 aa15.77■□□□□ 0.12
VPS29-211ENST00000553128 TRMT2AQ8IZ69 625 aaKnown RBP15.77■□□□□ 0.12
VPS29-211ENST00000553128 MAGEB6Q8N7X4 407 aa15.77■□□□□ 0.12
VPS29-211ENST00000553128 MROH8Q9H579 483 aa15.77■□□□□ 0.12
VPS29-211ENST00000553128 SLC5A4Q9NY91 659 aa15.77■□□□□ 0.12
VPS29-211ENST00000553128 TBX21Q9UL17 535 aa15.77■□□□□ 0.12
VPS29-211ENST00000553128 PLXNA1Q9UIW2 1896 aa15.76■□□□□ 0.11
VPS29-211ENST00000553128 MPHOSPH10O00566 681 aaKnown RBP15.76■□□□□ 0.11
VPS29-211ENST00000553128 ACRP10323 421 aa15.76■□□□□ 0.11
VPS29-211ENST00000553128 FCER1AP12319 257 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms