RNA–Protein interactions for RNA: ENST00000552872.5

MMP19-209, Transcript of matrix metallopeptidase 19, human

TSL 1 (best)

Gene MMP19, Length 2,350 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MMP19-209	ENST00000552872	TMX3	Q96JJ7	454 aa		11.84	□□□□□ -0.51
MMP19-209	ENST00000552872	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	11.84	□□□□□ -0.51
MMP19-209	ENST00000552872	MICU3	Q86XE3	530 aa		11.84	□□□□□ -0.51
MMP19-209	ENST00000552872	CCDC83	Q8IWF9	413 aa		11.84	□□□□□ -0.51
MMP19-209	ENST00000552872	LRRC47	Q8N1G4	583 aa	Known RBP	11.84	□□□□□ -0.51
MMP19-209	ENST00000552872	IGDCC4	Q8TDY8	1250 aa		11.84	□□□□□ -0.51
MMP19-209	ENST00000552872	PIBF1	Q8WXW3	757 aa		11.84	□□□□□ -0.51
MMP19-209	ENST00000552872	CEP95	Q96GE4	821 aa		11.84	□□□□□ -0.51
MMP19-209	ENST00000552872	UBAC1	Q9BSL1	405 aa		11.84	□□□□□ -0.51
MMP19-209	ENST00000552872	TM6SF1	Q9BZW5	370 aa		11.84	□□□□□ -0.51
MMP19-209	ENST00000552872	KRT23	Q9C075	422 aa		11.84	□□□□□ -0.51
MMP19-209	ENST00000552872	RNF41	Q9H4P4	317 aa	Predicted RBP	11.84	□□□□□ -0.51
MMP19-209	ENST00000552872	LY9	Q9HBG7	655 aa		11.84	□□□□□ -0.51
MMP19-209	ENST00000552872	KLF18	A0A0U1RQI7	1052 aa		11.83	□□□□□ -0.52
MMP19-209	ENST00000552872	UBE2Q2L	H0YL09	131 aa		11.83	□□□□□ -0.52
MMP19-209	ENST00000552872	GH2	P01242	217 aa		11.83	□□□□□ -0.52
MMP19-209	ENST00000552872	INPP5B	P32019	993 aa		11.83	□□□□□ -0.52
MMP19-209	ENST00000552872	FOSB	P53539	338 aa		11.83	□□□□□ -0.52
MMP19-209	ENST00000552872	ST3GAL1	Q11201	340 aa		11.83	□□□□□ -0.52
MMP19-209	ENST00000552872	SEPT2	Q15019	361 aa		11.83	□□□□□ -0.52
MMP19-209	ENST00000552872	ZYX	Q15942	572 aa	Known RBP	11.83	□□□□□ -0.52
MMP19-209	ENST00000552872	CERKL	Q49MI3	558 aa	Predicted RBP	11.83	□□□□□ -0.52
MMP19-209	ENST00000552872	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.83	□□□□□ -0.52
MMP19-209	ENST00000552872	SULF1	Q8IWU6	871 aa		11.83	□□□□□ -0.52
MMP19-209	ENST00000552872	RNF214	Q8ND24	703 aa		11.83	□□□□□ -0.52
MMP19-209	ENST00000552872	NUP133	Q8WUM0	1156 aa		11.83	□□□□□ -0.52
MMP19-209	ENST00000552872	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.83	□□□□□ -0.52
MMP19-209	ENST00000552872	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	11.83	□□□□□ -0.52
MMP19-209	ENST00000552872	ROBO3	Q96MS0	1386 aa		11.83	□□□□□ -0.52
MMP19-209	ENST00000552872	SH2B2	O14492	632 aa	Predicted RBP	11.83	□□□□□ -0.52
MMP19-209	ENST00000552872	TNNI2	P48788	182 aa		11.83	□□□□□ -0.52
MMP19-209	ENST00000552872	NOLC1	Q14978	699 aa	Known RBP eCLIP	11.83	□□□□□ -0.52
MMP19-209	ENST00000552872	DHX36	Q9H2U1	1008 aa	Known RBP	11.83	□□□□□ -0.52
MMP19-209	ENST00000552872	CPVL	Q9H3G5	476 aa		11.83	□□□□□ -0.52
MMP19-209	ENST00000552872	CNNM2	Q9H8M5	875 aa		11.83	□□□□□ -0.52
MMP19-209	ENST00000552872	SCN4A	P35499	1836 aa		11.83	□□□□□ -0.52
MMP19-209	ENST00000552872	SSC5D	A1L4H1	1573 aa		11.83	□□□□□ -0.52
MMP19-209	ENST00000552872	ATRNL1	Q5VV63	1379 aa		11.82	□□□□□ -0.52
MMP19-209	ENST00000552872	IQCA1L	A6NCM1	817 aa		11.82	□□□□□ -0.52
MMP19-209	ENST00000552872	U2AF2	P26368	475 aa	Known RBP eCLIP	11.82	□□□□□ -0.52
MMP19-209	ENST00000552872	IFFO2	Q5TF58	517 aa		11.82	□□□□□ -0.52
MMP19-209	ENST00000552872	FAM83A	Q86UY5	434 aa		11.82	□□□□□ -0.52
MMP19-209	ENST00000552872	TSPY26P	Q9H489	355 aa		11.82	□□□□□ -0.52
MMP19-209	ENST00000552872	YY1AP1	Q9H869	796 aa		11.82	□□□□□ -0.52
MMP19-209	ENST00000552872	GOLGA8B	A8MQT2	603 aa		11.82	□□□□□ -0.52
MMP19-209	ENST00000552872	ORC4	O43929	436 aa		11.82	□□□□□ -0.52
MMP19-209	ENST00000552872	FGR	P09769	529 aa		11.82	□□□□□ -0.52
MMP19-209	ENST00000552872	GOLGA8H	P0CJ92	632 aa		11.82	□□□□□ -0.52
MMP19-209	ENST00000552872	VEGFA	P15692	232 aa	Predicted RBP	11.82	□□□□□ -0.52
MMP19-209	ENST00000552872	TNFAIP1	Q13829	316 aa		11.82	□□□□□ -0.52
MMP19-209	ENST00000552872	WTAP	Q15007	396 aa		11.82	□□□□□ -0.52
MMP19-209	ENST00000552872	RCSD1	Q6JBY9	416 aa		11.82	□□□□□ -0.52
MMP19-209	ENST00000552872	IL17RA	Q96F46	866 aa		11.82	□□□□□ -0.52
MMP19-209	ENST00000552872	ANGEL1	Q9UNK9	670 aa	Known RBP	11.82	□□□□□ -0.52
MMP19-209	ENST00000552872	ZDHHC9	Q9Y397	364 aa		11.82	□□□□□ -0.52
MMP19-209	ENST00000552872	WDR90	Q96KV7	1748 aa		11.81	□□□□□ -0.52
MMP19-209	ENST00000552872	MYH4	Q9Y623	1939 aa		11.81	□□□□□ -0.52
MMP19-209	ENST00000552872	hCG_1642624	A0A1W2PR95	340 aa		11.81	□□□□□ -0.52
MMP19-209	ENST00000552872	GUCY1A2	P33402	732 aa		11.81	□□□□□ -0.52
MMP19-209	ENST00000552872	ECE1	P42892	770 aa		11.81	□□□□□ -0.52
MMP19-209	ENST00000552872	IFIT1B	Q5T764	474 aa	Known RBP	11.81	□□□□□ -0.52
MMP19-209	ENST00000552872	USP50	Q70EL3	339 aa	Predicted RBP	11.81	□□□□□ -0.52
MMP19-209	ENST00000552872	APOBEC3F	Q8IUX4	373 aa	Known RBP	11.81	□□□□□ -0.52
MMP19-209	ENST00000552872	CLIP2	Q9UDT6	1046 aa		11.81	□□□□□ -0.52
MMP19-209	ENST00000552872	JAK2	O60674	1132 aa		11.81	□□□□□ -0.52
MMP19-209	ENST00000552872	HMGB1	P09429	215 aa	Known RBP	11.81	□□□□□ -0.52
MMP19-209	ENST00000552872	TTLL12	Q14166	644 aa	Predicted RBP	11.81	□□□□□ -0.52
MMP19-209	ENST00000552872	SEC23A	Q15436	765 aa		11.81	□□□□□ -0.52
MMP19-209	ENST00000552872	ABCB5	Q2M3G0	1257 aa		11.81	□□□□□ -0.52
MMP19-209	ENST00000552872	IQCA1	Q86XH1	822 aa		11.81	□□□□□ -0.52
MMP19-209	ENST00000552872	SPICE1	Q8N0Z3	855 aa		11.81	□□□□□ -0.52
MMP19-209	ENST00000552872	SYAP1	Q96A49	352 aa	Predicted RBP	11.81	□□□□□ -0.52
MMP19-209	ENST00000552872	DDX11	Q96FC9	970 aa		11.81	□□□□□ -0.52
MMP19-209	ENST00000552872	WRNIP1	Q96S55	665 aa		11.81	□□□□□ -0.52
MMP19-209	ENST00000552872	LIMCH1	Q9UPQ0	1083 aa		11.81	□□□□□ -0.52
MMP19-209	ENST00000552872	PDIA3	P30101	505 aa	Known RBP	11.8	□□□□□ -0.52
MMP19-209	ENST00000552872	ADD1	P35611	737 aa	Known RBP	11.8	□□□□□ -0.52
MMP19-209	ENST00000552872	SCRN1	Q12765	414 aa		11.8	□□□□□ -0.52
MMP19-209	ENST00000552872	FKBP1C	Q5VVH2	108 aa		11.8	□□□□□ -0.52
MMP19-209	ENST00000552872	ACER1	Q8TDN7	264 aa		11.8	□□□□□ -0.52
MMP19-209	ENST00000552872	CDCA5	Q96FF9	252 aa		11.8	□□□□□ -0.52
MMP19-209	ENST00000552872	HPS5	Q9UPZ3	1129 aa		11.8	□□□□□ -0.52
MMP19-209	ENST00000552872	ATAD5	Q96QE3	1844 aa		11.8	□□□□□ -0.52
MMP19-209	ENST00000552872	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.8	□□□□□ -0.52
MMP19-209	ENST00000552872	ERICH2	A1L162	156 aa		11.79	□□□□□ -0.52
MMP19-209	ENST00000552872	CCDC69	A6NI79	296 aa		11.79	□□□□□ -0.52
MMP19-209	ENST00000552872	PHF20L1	A8MW92	1017 aa		11.79	□□□□□ -0.52
MMP19-209	ENST00000552872	IRX5	P78411	483 aa	Predicted RBP	11.79	□□□□□ -0.52
MMP19-209	ENST00000552872	TATDN1	Q6P1N9	297 aa		11.79	□□□□□ -0.52
MMP19-209	ENST00000552872	FOXP4	Q8IVH2	680 aa	Predicted RBP	11.79	□□□□□ -0.52
MMP19-209	ENST00000552872	ANKRD7	Q92527	254 aa		11.79	□□□□□ -0.52
MMP19-209	ENST00000552872	CLMN	Q96JQ2	1002 aa		11.79	□□□□□ -0.52
MMP19-209	ENST00000552872	NUP88	Q99567	741 aa	Predicted RBP	11.79	□□□□□ -0.52
MMP19-209	ENST00000552872	TMEM47	Q9BQJ4	181 aa		11.79	□□□□□ -0.52
MMP19-209	ENST00000552872	EHD4	Q9H223	541 aa		11.79	□□□□□ -0.52
MMP19-209	ENST00000552872	NPM3	O75607	178 aa	Known RBP	11.79	□□□□□ -0.52
MMP19-209	ENST00000552872	EEF2	P13639	858 aa	Known RBP	11.79	□□□□□ -0.52
MMP19-209	ENST00000552872	CDC27	P30260	824 aa		11.79	□□□□□ -0.52
MMP19-209	ENST00000552872	MKRN3	Q13064	507 aa	Known RBP	11.79	□□□□□ -0.52
MMP19-209	ENST00000552872	APOA5	Q6Q788	366 aa		11.79	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms