RNA–Protein interactions for RNA: ENST00000552197.5

SLC38A1-210, Transcript of solute carrier family 38 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC38A1, Length 2,599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-210ENST00000552197 GRM4Q14833 912 aa12.8□□□□□ -0.36
SLC38A1-210ENST00000552197 MIGA2Q7L4E1 593 aa12.8□□□□□ -0.36
SLC38A1-210ENST00000552197 CCDC17Q96LX7 622 aa12.8□□□□□ -0.36
SLC38A1-210ENST00000552197 CPVLQ9H3G5 476 aa12.8□□□□□ -0.36
SLC38A1-210ENST00000552197 PLIN4Q96Q06 1357 aa12.8□□□□□ -0.36
SLC38A1-210ENST00000552197 IGKV6D-41A0A0C4DH26 115 aa12.79□□□□□ -0.36
SLC38A1-210ENST00000552197 KIF28PB7ZC32 967 aa12.79□□□□□ -0.36
SLC38A1-210ENST00000552197 RAD21O60216 631 aa12.79□□□□□ -0.36
SLC38A1-210ENST00000552197 TTLL1O95922 423 aa12.79□□□□□ -0.36
SLC38A1-210ENST00000552197 GNL2Q13823 731 aaKnown RBP12.79□□□□□ -0.36
SLC38A1-210ENST00000552197 PKN1Q16512 942 aa12.79□□□□□ -0.36
SLC38A1-210ENST00000552197 SKOR2Q2VWA4 1001 aaPredicted RBP12.79□□□□□ -0.36
SLC38A1-210ENST00000552197 TATDN1Q6P1N9 297 aa12.79□□□□□ -0.36
SLC38A1-210ENST00000552197 CNTNAP5Q8WYK1 1306 aa12.79□□□□□ -0.36
SLC38A1-210ENST00000552197 USP17L5A8MUK1 530 aa12.79□□□□□ -0.36
SLC38A1-210ENST00000552197 PRPF3O43395 683 aaKnown RBP12.79□□□□□ -0.36
SLC38A1-210ENST00000552197 RRP1BQ14684 758 aaKnown RBP12.79□□□□□ -0.36
SLC38A1-210ENST00000552197 GPT2Q8TD30 523 aa12.79□□□□□ -0.36
SLC38A1-210ENST00000552197 FTOQ9C0B1 505 aaKnown RBP eCLIP12.79□□□□□ -0.36
SLC38A1-210ENST00000552197 RNF181Q9P0P0 153 aa12.79□□□□□ -0.36
SLC38A1-210ENST00000552197 VPS54Q9P1Q0 977 aa12.79□□□□□ -0.36
SLC38A1-210ENST00000552197 DICER1Q9UPY3 1922 aaKnown RBP12.79□□□□□ -0.36
SLC38A1-210ENST00000552197 MYH4Q9Y623 1939 aa12.79□□□□□ -0.36
SLC38A1-210ENST00000552197 PARP1P09874 1014 aaKnown RBP12.78□□□□□ -0.36
SLC38A1-210ENST00000552197 NOVP48745 357 aa12.78□□□□□ -0.36
SLC38A1-210ENST00000552197 KIF23Q02241 960 aaPredicted RBP12.78□□□□□ -0.36
SLC38A1-210ENST00000552197 RASA3Q14644 834 aa12.78□□□□□ -0.36
SLC38A1-210ENST00000552197 SEPT2Q15019 361 aa12.78□□□□□ -0.36
SLC38A1-210ENST00000552197 ABCB5Q2M3G0 1257 aa12.78□□□□□ -0.36
SLC38A1-210ENST00000552197 KLRF2D3W0D1 207 aa12.78□□□□□ -0.36
SLC38A1-210ENST00000552197 H7C1D1 291 aa12.78□□□□□ -0.36
SLC38A1-210ENST00000552197 VEGFAP15692 232 aaPredicted RBP12.78□□□□□ -0.36
SLC38A1-210ENST00000552197 JAG1P78504 1218 aa12.78□□□□□ -0.36
SLC38A1-210ENST00000552197 KIF4BQ2VIQ3 1234 aa12.78□□□□□ -0.36
SLC38A1-210ENST00000552197 FKBP1CQ5VVH2 108 aa12.78□□□□□ -0.36
SLC38A1-210ENST00000552197 FAM83AQ86UY5 434 aa12.78□□□□□ -0.36
SLC38A1-210ENST00000552197 METTL16Q86W50 562 aaKnown RBP12.78□□□□□ -0.36
SLC38A1-210ENST00000552197 SPATA32Q96LK8 384 aa12.78□□□□□ -0.36
SLC38A1-210ENST00000552197 MAP3K14Q99558 947 aa12.78□□□□□ -0.36
SLC38A1-210ENST00000552197 FRMPD2Q68DX3 1309 aaPredicted RBP12.78□□□□□ -0.36
SLC38A1-210ENST00000552197 PALM3A6NDB9 673 aaPredicted RBP12.77□□□□□ -0.36
SLC38A1-210ENST00000552197 DDNO94850 711 aaPredicted RBP12.77□□□□□ -0.36
SLC38A1-210ENST00000552197 GH2P01242 217 aa12.77□□□□□ -0.36
SLC38A1-210ENST00000552197 EEF2P13639 858 aaKnown RBP12.77□□□□□ -0.36
SLC38A1-210ENST00000552197 VAT1LQ9HCJ6 419 aa12.77□□□□□ -0.36
SLC38A1-210ENST00000552197 HERC5Q9UII4 1024 aaKnown RBP12.77□□□□□ -0.36
SLC38A1-210ENST00000552197 HACL1Q9UJ83 578 aa12.77□□□□□ -0.36
SLC38A1-210ENST00000552197 MYH15Q9Y2K3 1946 aa12.77□□□□□ -0.36
SLC38A1-210ENST00000552197 COL2A1P02458 1487 aaPredicted RBP12.77□□□□□ -0.36
SLC38A1-210ENST00000552197 PDHBP11177 359 aa12.77□□□□□ -0.37
SLC38A1-210ENST00000552197 TNNI2P48788 182 aa12.77□□□□□ -0.37
SLC38A1-210ENST00000552197 GNAQP50148 359 aa12.77□□□□□ -0.37
SLC38A1-210ENST00000552197 KLHL40Q2TBA0 621 aa12.77□□□□□ -0.37
SLC38A1-210ENST00000552197 GPC2Q8N158 579 aa12.77□□□□□ -0.37
SLC38A1-210ENST00000552197 SHISA4Q96DD7 197 aa12.77□□□□□ -0.37
SLC38A1-210ENST00000552197 USP28Q96RU2 1077 aa12.77□□□□□ -0.37
SLC38A1-210ENST00000552197 UBA5Q9GZZ9 404 aa12.77□□□□□ -0.37
SLC38A1-210ENST00000552197 ISY1Q9ULR0 285 aaKnown RBP12.77□□□□□ -0.37
SLC38A1-210ENST00000552197 BTBD18B2RXH4 712 aa12.76□□□□□ -0.37
SLC38A1-210ENST00000552197 CYTH3O43739 400 aa12.76□□□□□ -0.37
SLC38A1-210ENST00000552197 MMP1P03956 469 aa12.76□□□□□ -0.37
SLC38A1-210ENST00000552197 EPS15P42566 896 aa12.76□□□□□ -0.37
SLC38A1-210ENST00000552197 MMP14P50281 582 aa12.76□□□□□ -0.37
SLC38A1-210ENST00000552197 CSPP1Q1MSJ5 1256 aa12.76□□□□□ -0.37
SLC38A1-210ENST00000552197 SLC35G1Q2M3R5 365 aa12.76□□□□□ -0.37
SLC38A1-210ENST00000552197 TMEM179Q6ZVK1 233 aa12.76□□□□□ -0.37
SLC38A1-210ENST00000552197 TMEM87AQ8NBN3 555 aa12.76□□□□□ -0.37
SLC38A1-210ENST00000552197 KANSL2Q9H9L4 492 aa12.76□□□□□ -0.37
SLC38A1-210ENST00000552197 CABP5Q9NP86 173 aa12.76□□□□□ -0.37
SLC38A1-210ENST00000552197 CFAP45Q9UL16 551 aa12.76□□□□□ -0.37
SLC38A1-210ENST00000552197 GREB1LQ9C091 1923 aaPredicted RBP12.76□□□□□ -0.37
SLC38A1-210ENST00000552197 XBP1P17861 261 aa12.76□□□□□ -0.37
SLC38A1-210ENST00000552197 ICA1Q05084 483 aa12.76□□□□□ -0.37
SLC38A1-210ENST00000552197 SAFBQ15424 915 aaKnown RBP eCLIP12.76□□□□□ -0.37
SLC38A1-210ENST00000552197 CAVIN1Q6NZI2 390 aaKnown RBP12.76□□□□□ -0.37
SLC38A1-210ENST00000552197 HOMER1Q86YM7 354 aa12.76□□□□□ -0.37
SLC38A1-210ENST00000552197 DIS3L2Q8IYB7 885 aaKnown RBP12.76□□□□□ -0.37
SLC38A1-210ENST00000552197 TRPM4Q8TD43 1214 aa12.76□□□□□ -0.37
SLC38A1-210ENST00000552197 LEO1Q8WVC0 666 aaPredicted RBP12.76□□□□□ -0.37
SLC38A1-210ENST00000552197 SCAND2PQ9GZW5 306 aaPredicted RBP12.76□□□□□ -0.37
SLC38A1-210ENST00000552197 GPCPD1Q9NPB8 672 aa12.76□□□□□ -0.37
SLC38A1-210ENST00000552197 GPRC5DQ9NZD1 345 aa12.76□□□□□ -0.37
SLC38A1-210ENST00000552197 RBM27Q9P2N5 1060 aaKnown RBP12.76□□□□□ -0.37
SLC38A1-210ENST00000552197 SCG2P13521 617 aa12.76□□□□□ -0.37
SLC38A1-210ENST00000552197 C9orf131Q5VYM1 1079 aa12.76□□□□□ -0.37
SLC38A1-210ENST00000552197 BRAPQ7Z569 592 aa12.76□□□□□ -0.37
SLC38A1-210ENST00000552197 OXER1Q8TDS5 423 aa12.76□□□□□ -0.37
SLC38A1-210ENST00000552197 GPKOWQ92917 476 aaPredicted RBP eCLIP12.76□□□□□ -0.37
SLC38A1-210ENST00000552197 ZNF396Q96N95 335 aaPredicted RBP12.76□□□□□ -0.37
SLC38A1-210ENST00000552197 NR5A1Q13285 461 aa12.75□□□□□ -0.37
SLC38A1-210ENST00000552197 TNFAIP1Q13829 316 aa12.75□□□□□ -0.37
SLC38A1-210ENST00000552197 GPR162Q16538 588 aa12.75□□□□□ -0.37
SLC38A1-210ENST00000552197 PFKFB3Q16875 520 aaPredicted RBP12.75□□□□□ -0.37
SLC38A1-210ENST00000552197 ANGEL2Q5VTE6 544 aaKnown RBP12.75□□□□□ -0.37
SLC38A1-210ENST00000552197 MYSM1Q5VVJ2 828 aa12.75□□□□□ -0.37
SLC38A1-210ENST00000552197 SIAH1Q8IUQ4 282 aa12.75□□□□□ -0.37
SLC38A1-210ENST00000552197 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.75□□□□□ -0.37
SLC38A1-210ENST00000552197 PGAP2Q9UHJ9 254 aa12.75□□□□□ -0.37
SLC38A1-210ENST00000552197 UBE2HP62256 183 aa12.75□□□□□ -0.37
SLC38A1-210ENST00000552197 CCDC96Q2M329 555 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms