RNA–Protein interactions for RNA: ENST00000551485.5

PFKM-223, Transcript of phosphofructokinase, muscle, human

TSL 5

Gene PFKM, Length 689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-223	ENST00000551485		A0A0G2JMZ2	1700 aa		12.95	□□□□□ -0.34
PFKM-223	ENST00000551485	NAV1	Q8NEY1	1877 aa		12.94	□□□□□ -0.34
PFKM-223	ENST00000551485	SEPT4	O43236	478 aa		12.94	□□□□□ -0.34
PFKM-223	ENST00000551485	STRN	O43815	780 aa		12.94	□□□□□ -0.34
PFKM-223	ENST00000551485	BCAR3	O75815	825 aa		12.94	□□□□□ -0.34
PFKM-223	ENST00000551485	PLCD1	P51178	756 aa		12.94	□□□□□ -0.34
PFKM-223	ENST00000551485	ATP8B2	P98198	1209 aa		12.94	□□□□□ -0.34
PFKM-223	ENST00000551485	SEPT2	Q15019	361 aa		12.94	□□□□□ -0.34
PFKM-223	ENST00000551485	ANO1	Q5XXA6	986 aa		12.94	□□□□□ -0.34
PFKM-223	ENST00000551485	TMED8	Q6PL24	325 aa	Predicted RBP	12.94	□□□□□ -0.34
PFKM-223	ENST00000551485	TMEM57	Q8N5G2	664 aa		12.94	□□□□□ -0.34
PFKM-223	ENST00000551485	SHCBP1	Q8NEM2	672 aa		12.94	□□□□□ -0.34
PFKM-223	ENST00000551485	BAD	Q92934	168 aa		12.94	□□□□□ -0.34
PFKM-223	ENST00000551485	SPATC1L	Q9H0A9	340 aa		12.94	□□□□□ -0.34
PFKM-223	ENST00000551485	CCDC8	Q9H0W5	538 aa	Predicted RBP	12.94	□□□□□ -0.34
PFKM-223	ENST00000551485	SEMA6B	Q9H3T3	888 aa		12.94	□□□□□ -0.34
PFKM-223	ENST00000551485	PDLIM7	Q9NR12	457 aa		12.94	□□□□□ -0.34
PFKM-223	ENST00000551485	NOP58	Q9Y2X3	529 aa	Known RBP	12.94	□□□□□ -0.34
PFKM-223	ENST00000551485		A0A1W2PRG0	241 aa		12.93	□□□□□ -0.34
PFKM-223	ENST00000551485	COBL	O75128	1261 aa		12.93	□□□□□ -0.34
PFKM-223	ENST00000551485	MYCN	P04198	464 aa	Predicted RBP	12.93	□□□□□ -0.34
PFKM-223	ENST00000551485	ERCC3	P19447	782 aa		12.93	□□□□□ -0.34
PFKM-223	ENST00000551485	SMAD3	P84022	425 aa	Known RBP	12.93	□□□□□ -0.34
PFKM-223	ENST00000551485	GABPA	Q06546	454 aa		12.93	□□□□□ -0.34
PFKM-223	ENST00000551485	MAP3K12	Q12852	859 aa		12.93	□□□□□ -0.34
PFKM-223	ENST00000551485	COG2	Q14746	738 aa		12.93	□□□□□ -0.34
PFKM-223	ENST00000551485	EAF2	Q96CJ1	260 aa	Predicted RBP	12.93	□□□□□ -0.34
PFKM-223	ENST00000551485	RIOK1	Q9BRS2	568 aa	Known RBP	12.93	□□□□□ -0.34
PFKM-223	ENST00000551485	TANGO6	Q9C0B7	1094 aa		12.93	□□□□□ -0.34
PFKM-223	ENST00000551485	ANTXR1	Q9H6X2	564 aa		12.93	□□□□□ -0.34
PFKM-223	ENST00000551485	HOXC10	Q9NYD6	342 aa		12.93	□□□□□ -0.34
PFKM-223	ENST00000551485	TRIM43B	A6NCK2	446 aa		12.92	□□□□□ -0.34
PFKM-223	ENST00000551485	POLR3D	P05423	398 aa	Predicted RBP	12.92	□□□□□ -0.34
PFKM-223	ENST00000551485	ADCYAP1R1	P41586	468 aa		12.92	□□□□□ -0.34
PFKM-223	ENST00000551485	LRRC41	Q15345	812 aa		12.92	□□□□□ -0.34
PFKM-223	ENST00000551485	C1orf53	Q5VUE5	145 aa		12.92	□□□□□ -0.34
PFKM-223	ENST00000551485	SH3RF1	Q7Z6J0	888 aa		12.92	□□□□□ -0.34
PFKM-223	ENST00000551485	MB21D1	Q8N884	522 aa		12.92	□□□□□ -0.34
PFKM-223	ENST00000551485	MYLIP	Q8WY64	445 aa		12.92	□□□□□ -0.34
PFKM-223	ENST00000551485	TRIM43	Q96BQ3	446 aa	Predicted RBP	12.92	□□□□□ -0.34
PFKM-223	ENST00000551485	TTYH1	Q9H313	450 aa	Predicted RBP	12.92	□□□□□ -0.34
PFKM-223	ENST00000551485	C1orf115	Q9H7X2	142 aa		12.92	□□□□□ -0.34
PFKM-223	ENST00000551485	SLC5A4	Q9NY91	659 aa		12.92	□□□□□ -0.34
PFKM-223	ENST00000551485	MPHOSPH10	O00566	681 aa	Known RBP	12.91	□□□□□ -0.34
PFKM-223	ENST00000551485	FAM47A	Q5JRC9	791 aa		12.91	□□□□□ -0.34
PFKM-223	ENST00000551485	PRAMEF19	Q5SWL8	479 aa		12.91	□□□□□ -0.34
PFKM-223	ENST00000551485	ABRA	Q8N0Z2	381 aa		12.91	□□□□□ -0.34
PFKM-223	ENST00000551485	FERMT2	Q96AC1	680 aa		12.91	□□□□□ -0.34
PFKM-223	ENST00000551485	MROH8	Q9H579	483 aa		12.91	□□□□□ -0.34
PFKM-223	ENST00000551485	SMCHD1	A6NHR9	2005 aa		12.91	□□□□□ -0.34
PFKM-223	ENST00000551485	MAGEB6P1	A0A0J9YX57	407 aa		12.9	□□□□□ -0.34
PFKM-223	ENST00000551485	FOSL2	P15408	326 aa		12.9	□□□□□ -0.34
PFKM-223	ENST00000551485	DSG3	P32926	999 aa		12.9	□□□□□ -0.34
PFKM-223	ENST00000551485	EVX2	Q03828	476 aa		12.9	□□□□□ -0.34
PFKM-223	ENST00000551485	TLE2	Q04725	743 aa		12.9	□□□□□ -0.34
PFKM-223	ENST00000551485	PLS1	Q14651	629 aa		12.9	□□□□□ -0.34
PFKM-223	ENST00000551485	KIAA1755	Q5JYT7	1200 aa		12.9	□□□□□ -0.34
PFKM-223	ENST00000551485	ZKSCAN2	Q63HK3	967 aa		12.9	□□□□□ -0.34
PFKM-223	ENST00000551485	NCAPG2	Q86XI2	1143 aa		12.9	□□□□□ -0.34
PFKM-223	ENST00000551485	MAML3	Q96JK9	1138 aa		12.9	□□□□□ -0.34
PFKM-223	ENST00000551485	CRNKL1	Q9BZJ0	848 aa	Known RBP	12.9	□□□□□ -0.34
PFKM-223	ENST00000551485	MCM9	Q9NXL9	1143 aa		12.9	□□□□□ -0.34
PFKM-223	ENST00000551485	PHF24	Q9UPV7	400 aa		12.9	□□□□□ -0.34
PFKM-223	ENST00000551485	ZNFX1	Q9P2E3	1918 aa	Known RBP	12.9	□□□□□ -0.35
PFKM-223	ENST00000551485	TMEM265	A0A087WTH1	108 aa		12.89	□□□□□ -0.35
PFKM-223	ENST00000551485	FLOT1	O75955	427 aa		12.89	□□□□□ -0.35
PFKM-223	ENST00000551485	TMEM179	Q6ZVK1	233 aa		12.89	□□□□□ -0.35
PFKM-223	ENST00000551485	ATG4C	Q96DT6	458 aa		12.89	□□□□□ -0.35
PFKM-223	ENST00000551485	RNPC3	Q96LT9	517 aa	Known RBP	12.89	□□□□□ -0.35
PFKM-223	ENST00000551485	XPNPEP3	Q9NQH7	507 aa		12.89	□□□□□ -0.35
PFKM-223	ENST00000551485	TACC3	Q9Y6A5	838 aa		12.89	□□□□□ -0.35
PFKM-223	ENST00000551485	PARP14	Q460N5	1801 aa		12.89	□□□□□ -0.35
PFKM-223	ENST00000551485	MYH8	P13535	1937 aa		12.89	□□□□□ -0.35
PFKM-223	ENST00000551485	MUC3A	Q02505	3323 aa		12.88	□□□□□ -0.35
PFKM-223	ENST00000551485	CLTB	P09497	229 aa		12.88	□□□□□ -0.35
PFKM-223	ENST00000551485	RARB	P10826	455 aa		12.88	□□□□□ -0.35
PFKM-223	ENST00000551485	FCER1A	P12319	257 aa		12.88	□□□□□ -0.35
PFKM-223	ENST00000551485	PDE6A	P16499	860 aa		12.88	□□□□□ -0.35
PFKM-223	ENST00000551485	ITGB8	P26012	769 aa		12.88	□□□□□ -0.35
PFKM-223	ENST00000551485	AACS	Q86V21	672 aa		12.88	□□□□□ -0.35
PFKM-223	ENST00000551485	SLC44A5	Q8NCS7	719 aa		12.88	□□□□□ -0.35
PFKM-223	ENST00000551485	PRDM6	Q9NQX0	595 aa		12.88	□□□□□ -0.35
PFKM-223	ENST00000551485	NRBP1	Q9UHY1	535 aa		12.88	□□□□□ -0.35
PFKM-223	ENST00000551485	TMX2	Q9Y320	296 aa		12.88	□□□□□ -0.35
PFKM-223	ENST00000551485	ROBO3	Q96MS0	1386 aa		12.88	□□□□□ -0.35
PFKM-223	ENST00000551485	KIAA0355	O15063	1070 aa		12.87	□□□□□ -0.35
PFKM-223	ENST00000551485	SLC25A27	O95847	323 aa		12.87	□□□□□ -0.35
PFKM-223	ENST00000551485	CYP2D6	P10635	497 aa		12.87	□□□□□ -0.35
PFKM-223	ENST00000551485	EPHB4	P54760	987 aa		12.87	□□□□□ -0.35
PFKM-223	ENST00000551485	ICA1	Q05084	483 aa		12.87	□□□□□ -0.35
PFKM-223	ENST00000551485	TMEM132B	Q14DG7	1078 aa		12.87	□□□□□ -0.35
PFKM-223	ENST00000551485	TTF1	Q15361	905 aa	Predicted RBP	12.87	□□□□□ -0.35
PFKM-223	ENST00000551485	SLC9C2	Q5TAH2	1124 aa		12.87	□□□□□ -0.35
PFKM-223	ENST00000551485	RNF180	Q86T96	592 aa		12.87	□□□□□ -0.35
PFKM-223	ENST00000551485	CLEC10A	Q8IUN9	316 aa		12.87	□□□□□ -0.35
PFKM-223	ENST00000551485	SIAH1	Q8IUQ4	282 aa		12.87	□□□□□ -0.35
PFKM-223	ENST00000551485	SPICE1	Q8N0Z3	855 aa		12.87	□□□□□ -0.35
PFKM-223	ENST00000551485	SDR42E1	Q8WUS8	393 aa		12.87	□□□□□ -0.35
PFKM-223	ENST00000551485	SH2D4A	Q9H788	454 aa		12.87	□□□□□ -0.35
PFKM-223	ENST00000551485	VCPKMT	Q9H867	229 aa		12.87	□□□□□ -0.35

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