RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 CYP2C19P33261 490 aa11.98□□□□□ -0.49
TRAFD1-207ENST00000550051 OLFML2BQ68BL8 750 aa11.98□□□□□ -0.49
TRAFD1-207ENST00000550051 TRPV1Q8NER1 839 aa11.98□□□□□ -0.49
TRAFD1-207ENST00000550051 ANTXR1Q9H6X2 564 aa11.98□□□□□ -0.49
TRAFD1-207ENST00000550051 RLFQ13129 1914 aa11.98□□□□□ -0.49
TRAFD1-207ENST00000550051 SEPT2Q15019 361 aa11.97□□□□□ -0.49
TRAFD1-207ENST00000550051 WDR78Q5VTH9 848 aa11.97□□□□□ -0.49
TRAFD1-207ENST00000550051 SLC39A5Q6ZMH5 540 aa11.97□□□□□ -0.49
TRAFD1-207ENST00000550051 DPP9Q86TI2 863 aa11.97□□□□□ -0.49
TRAFD1-207ENST00000550051 SHCBP1Q8NEM2 672 aa11.97□□□□□ -0.49
TRAFD1-207ENST00000550051 ZNFX1Q9P2E3 1918 aaKnown RBP11.97□□□□□ -0.49
TRAFD1-207ENST00000550051 MAGEB6P1A0A0J9YX57 407 aa11.96□□□□□ -0.49
TRAFD1-207ENST00000550051 A0A1W2PRG0 241 aa11.96□□□□□ -0.49
TRAFD1-207ENST00000550051 POLR3DP05423 398 aaPredicted RBP11.96□□□□□ -0.49
TRAFD1-207ENST00000550051 CYBAP13498 195 aa11.96□□□□□ -0.49
TRAFD1-207ENST00000550051 TTF1Q15361 905 aaPredicted RBP11.96□□□□□ -0.49
TRAFD1-207ENST00000550051 ERC1Q8IUD2 1116 aa11.96□□□□□ -0.49
TRAFD1-207ENST00000550051 ABRAQ8N0Z2 381 aa11.96□□□□□ -0.49
TRAFD1-207ENST00000550051 MB21D1Q8N884 522 aa11.96□□□□□ -0.49
TRAFD1-207ENST00000550051 SPOCK2Q92563 424 aa11.96□□□□□ -0.49
TRAFD1-207ENST00000550051 MOV10L1Q9BXT6 1211 aaKnown RBP11.96□□□□□ -0.49
TRAFD1-207ENST00000550051 SPATC1LQ9H0A9 340 aa11.96□□□□□ -0.49
TRAFD1-207ENST00000550051 MROH8Q9H579 483 aa11.96□□□□□ -0.49
TRAFD1-207ENST00000550051 C1orf115Q9H7X2 142 aa11.96□□□□□ -0.49
TRAFD1-207ENST00000550051 PRKAG2Q9UGJ0 569 aa11.96□□□□□ -0.49
TRAFD1-207ENST00000550051 ZNF236Q9UL36 1845 aa11.95□□□□□ -0.5
TRAFD1-207ENST00000550051 PITPNM1O00562 1244 aa11.95□□□□□ -0.5
TRAFD1-207ENST00000550051 SEPT4O43236 478 aa11.95□□□□□ -0.5
TRAFD1-207ENST00000550051 ADORA2AP29274 412 aa11.95□□□□□ -0.5
TRAFD1-207ENST00000550051 ATN1P54259 1190 aaPredicted RBP11.95□□□□□ -0.5
TRAFD1-207ENST00000550051 RTP1P59025 263 aa11.95□□□□□ -0.5
TRAFD1-207ENST00000550051 SNX17Q15036 470 aa11.95□□□□□ -0.5
TRAFD1-207ENST00000550051 C1orf53Q5VUE5 145 aa11.95□□□□□ -0.5
TRAFD1-207ENST00000550051 SIAH1Q8IUQ4 282 aa11.95□□□□□ -0.5
TRAFD1-207ENST00000550051 GUCD1Q96NT3 240 aa11.95□□□□□ -0.5
TRAFD1-207ENST00000550051 CRNKL1Q9BZJ0 848 aaKnown RBP11.95□□□□□ -0.5
TRAFD1-207ENST00000550051 SLC5A4Q9NY91 659 aa11.95□□□□□ -0.5
TRAFD1-207ENST00000550051 SMCHD1A6NHR9 2005 aa11.94□□□□□ -0.5
TRAFD1-207ENST00000550051 COBLO75128 1261 aa11.94□□□□□ -0.5
TRAFD1-207ENST00000550051 RLBP1P12271 317 aa11.94□□□□□ -0.5
TRAFD1-207ENST00000550051 ERCC3P19447 782 aa11.94□□□□□ -0.5
TRAFD1-207ENST00000550051 HSP90AB4PQ58FF6 505 aa11.94□□□□□ -0.5
TRAFD1-207ENST00000550051 GJC2Q5T442 439 aaPredicted RBP11.94□□□□□ -0.5
TRAFD1-207ENST00000550051 SLC9C2Q5TAH2 1124 aa11.94□□□□□ -0.5
TRAFD1-207ENST00000550051 CEP85Q6P2H3 762 aa11.94□□□□□ -0.5
TRAFD1-207ENST00000550051 TMEM179Q6ZVK1 233 aa11.94□□□□□ -0.5
TRAFD1-207ENST00000550051 AACSQ86V21 672 aa11.94□□□□□ -0.5
TRAFD1-207ENST00000550051 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.94□□□□□ -0.5
TRAFD1-207ENST00000550051 COL25A1Q9BXS0 654 aaPredicted RBP11.94□□□□□ -0.5
TRAFD1-207ENST00000550051 MCM9Q9NXL9 1143 aa11.94□□□□□ -0.5
TRAFD1-207ENST00000550051 SWAP70Q9UH65 585 aa11.94□□□□□ -0.5
TRAFD1-207ENST00000550051 TMX2Q9Y320 296 aa11.94□□□□□ -0.5
TRAFD1-207ENST00000550051 LTBP2Q14767 1821 aa11.94□□□□□ -0.5
TRAFD1-207ENST00000550051 CUL9Q8IWT3 2517 aa11.93□□□□□ -0.5
TRAFD1-207ENST00000550051 TCRBV5S4A2TA0A5A2 114 aa11.93□□□□□ -0.5
TRAFD1-207ENST00000550051 KBTBD13C9JR72 458 aa11.93□□□□□ -0.5
TRAFD1-207ENST00000550051 PDE6AP16499 860 aa11.93□□□□□ -0.5
TRAFD1-207ENST00000550051 SHHQ15465 462 aa11.93□□□□□ -0.5
TRAFD1-207ENST00000550051 KIAA1755Q5JYT7 1200 aa11.93□□□□□ -0.5
TRAFD1-207ENST00000550051 ITPRIPQ8IWB1 547 aa11.93□□□□□ -0.5
TRAFD1-207ENST00000550051 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.93□□□□□ -0.5
TRAFD1-207ENST00000550051 FTSJ3Q8IY81 847 aaKnown RBP11.93□□□□□ -0.5
TRAFD1-207ENST00000550051 DCP1AQ9NPI6 582 aaPredicted RBP11.93□□□□□ -0.5
TRAFD1-207ENST00000550051 NRBP1Q9UHY1 535 aa11.93□□□□□ -0.5
TRAFD1-207ENST00000550051 ADAMTS5Q9UNA0 930 aa11.93□□□□□ -0.5
TRAFD1-207ENST00000550051 UNC80Q8N2C7 3258 aa11.92□□□□□ -0.5
TRAFD1-207ENST00000550051 A0A0G2JMZ2 1700 aa11.92□□□□□ -0.5
TRAFD1-207ENST00000550051 LAMA2P24043 3122 aaKnown RBP11.92□□□□□ -0.5
TRAFD1-207ENST00000550051 MPHOSPH10O00566 681 aaKnown RBP11.92□□□□□ -0.5
TRAFD1-207ENST00000550051 SLC25A27O95847 323 aa11.92□□□□□ -0.5
TRAFD1-207ENST00000550051 FCER1AP12319 257 aa11.92□□□□□ -0.5
TRAFD1-207ENST00000550051 EVX2Q03828 476 aa11.92□□□□□ -0.5
TRAFD1-207ENST00000550051 LRRC41Q15345 812 aa11.92□□□□□ -0.5
TRAFD1-207ENST00000550051 PRAMEF19Q5SWL8 479 aa11.92□□□□□ -0.5
TRAFD1-207ENST00000550051 ZNF697Q5TEC3 545 aa11.92□□□□□ -0.5
TRAFD1-207ENST00000550051 RHPN1Q8TCX5 695 aa11.92□□□□□ -0.5
TRAFD1-207ENST00000550051 MAML3Q96JK9 1138 aa11.92□□□□□ -0.5
TRAFD1-207ENST00000550051 CCDC17Q96LX7 622 aa11.92□□□□□ -0.5
TRAFD1-207ENST00000550051 TANGO6Q9C0B7 1094 aa11.92□□□□□ -0.5
TRAFD1-207ENST00000550051 SEMA6BQ9H3T3 888 aa11.92□□□□□ -0.5
TRAFD1-207ENST00000550051 EXOC6BQ9Y2D4 811 aa11.92□□□□□ -0.5
TRAFD1-207ENST00000550051 ATP11BQ9Y2G3 1177 aa11.92□□□□□ -0.5
TRAFD1-207ENST00000550051 NAV1Q8NEY1 1877 aa11.91□□□□□ -0.5
TRAFD1-207ENST00000550051 ZNF532Q9HCE3 1301 aa11.91□□□□□ -0.5
TRAFD1-207ENST00000550051 FLOT1O75955 427 aa11.91□□□□□ -0.5
TRAFD1-207ENST00000550051 ADCYAP1R1P41586 468 aa11.91□□□□□ -0.5
TRAFD1-207ENST00000550051 SMAD3P84022 425 aaKnown RBP11.91□□□□□ -0.5
TRAFD1-207ENST00000550051 TRIM60Q495X7 471 aa11.91□□□□□ -0.5
TRAFD1-207ENST00000550051 CLASRPQ8N2M8 674 aaKnown RBP11.91□□□□□ -0.5
TRAFD1-207ENST00000550051 SDR42E1Q8WUS8 393 aa11.91□□□□□ -0.5
TRAFD1-207ENST00000550051 BADQ92934 168 aa11.91□□□□□ -0.5
TRAFD1-207ENST00000550051 FAM161BQ96MY7 647 aa11.91□□□□□ -0.5
TRAFD1-207ENST00000550051 CDX2Q99626 313 aaPredicted RBP11.91□□□□□ -0.5
TRAFD1-207ENST00000550051 SH2D4AQ9H788 454 aa11.91□□□□□ -0.5
TRAFD1-207ENST00000550051 VCPKMTQ9H867 229 aa11.91□□□□□ -0.5
TRAFD1-207ENST00000550051 ARHGEF10LQ9HCE6 1279 aa11.91□□□□□ -0.5
TRAFD1-207ENST00000550051 ATP8A2Q9NTI2 1148 aa11.91□□□□□ -0.5
TRAFD1-207ENST00000550051 PHF24Q9UPV7 400 aa11.91□□□□□ -0.5
TRAFD1-207ENST00000550051 DIS3Q9Y2L1 958 aaKnown RBP11.91□□□□□ -0.5
TRAFD1-207ENST00000550051 TACC3Q9Y6A5 838 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms