RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 MAPK13O15264 365 aa5.77□□□□□ -1.49
SCAF11-212ENST00000549162 GRIN3BO60391 1043 aa5.77□□□□□ -1.49
SCAF11-212ENST00000549162 KCNJ6P48051 423 aa5.77□□□□□ -1.49
SCAF11-212ENST00000549162 GNAQP50148 359 aa5.77□□□□□ -1.49
SCAF11-212ENST00000549162 MARSP56192 900 aaKnown RBP5.77□□□□□ -1.49
SCAF11-212ENST00000549162 DIXDC1Q155Q3 683 aa5.77□□□□□ -1.49
SCAF11-212ENST00000549162 Q4G0T1 1027 aa5.77□□□□□ -1.49
SCAF11-212ENST00000549162 CAVIN4Q5BKX8 364 aa5.77□□□□□ -1.49
SCAF11-212ENST00000549162 SH3RF1Q7Z6J0 888 aa5.77□□□□□ -1.49
SCAF11-212ENST00000549162 CERS5Q8N5B7 392 aa5.77□□□□□ -1.49
SCAF11-212ENST00000549162 USP6NLQ92738 828 aa5.77□□□□□ -1.49
SCAF11-212ENST00000549162 C22orf23Q9BZE7 217 aa5.77□□□□□ -1.49
SCAF11-212ENST00000549162 BRPF3Q9ULD4 1205 aa5.77□□□□□ -1.49
SCAF11-212ENST00000549162 FRMD3A2A2Y4 597 aa5.76□□□□□ -1.49
SCAF11-212ENST00000549162 SOWAHDA6NJG2 315 aa5.76□□□□□ -1.49
SCAF11-212ENST00000549162 APBA3O96018 575 aa5.76□□□□□ -1.49
SCAF11-212ENST00000549162 GNRH1P01148 92 aa5.76□□□□□ -1.49
SCAF11-212ENST00000549162 TROAPQ12815 778 aa5.76□□□□□ -1.49
SCAF11-212ENST00000549162 AKNAD1Q5T1N1 836 aa5.76□□□□□ -1.49
SCAF11-212ENST00000549162 PPP4R3AQ6IN85 833 aa5.76□□□□□ -1.49
SCAF11-212ENST00000549162 NBPF5PQ86XG9 351 aaPredicted RBP5.76□□□□□ -1.49
SCAF11-212ENST00000549162 ZNF592Q92610 1267 aa5.76□□□□□ -1.49
SCAF11-212ENST00000549162 PHF20Q9BVI0 1012 aa5.76□□□□□ -1.49
SCAF11-212ENST00000549162 TRIM34Q9BYJ4 488 aa5.76□□□□□ -1.49
SCAF11-212ENST00000549162 TLR7Q9NYK1 1049 aaKnown RBP5.76□□□□□ -1.49
SCAF11-212ENST00000549162 A0A0D9SFI3 127 aa5.76□□□□□ -1.49
SCAF11-212ENST00000549162 KIF3CO14782 793 aa5.76□□□□□ -1.49
SCAF11-212ENST00000549162 LILRB3O75022 631 aa5.76□□□□□ -1.49
SCAF11-212ENST00000549162 MCCP23508 829 aa5.76□□□□□ -1.49
SCAF11-212ENST00000549162 EHHADHQ08426 723 aa5.76□□□□□ -1.49
SCAF11-212ENST00000549162 NMIQ13287 307 aaPredicted RBP5.76□□□□□ -1.49
SCAF11-212ENST00000549162 LARGE2Q8N3Y3 721 aa5.76□□□□□ -1.49
SCAF11-212ENST00000549162 PXYLP1Q8TE99 480 aa5.76□□□□□ -1.49
SCAF11-212ENST00000549162 FUCA2Q9BTY2 467 aa5.76□□□□□ -1.49
SCAF11-212ENST00000549162 CUEDC2Q9H467 287 aa5.76□□□□□ -1.49
SCAF11-212ENST00000549162 SPTLC1O15269 473 aa5.76□□□□□ -1.49
SCAF11-212ENST00000549162 YEATS4O95619 227 aa5.76□□□□□ -1.49
SCAF11-212ENST00000549162 POU5F1BQ06416 359 aa5.76□□□□□ -1.49
SCAF11-212ENST00000549162 STOX1Q6ZVD7 989 aa5.76□□□□□ -1.49
SCAF11-212ENST00000549162 IFNL3Q8IZI9 196 aa5.76□□□□□ -1.49
SCAF11-212ENST00000549162 C4orf32Q8N8J7 132 aa5.76□□□□□ -1.49
SCAF11-212ENST00000549162 DDX54Q8TDD1 881 aaKnown RBP5.76□□□□□ -1.49
SCAF11-212ENST00000549162 IL25Q9H293 177 aa5.76□□□□□ -1.49
SCAF11-212ENST00000549162 DAGLAQ9Y4D2 1042 aa5.76□□□□□ -1.49
SCAF11-212ENST00000549162 LMNB1P20700 586 aa5.75□□□□□ -1.49
SCAF11-212ENST00000549162 SCNN1AP37088 669 aa5.75□□□□□ -1.49
SCAF11-212ENST00000549162 ZNF445P59923 1031 aa5.75□□□□□ -1.49
SCAF11-212ENST00000549162 EN1Q05925 392 aaPredicted RBP5.75□□□□□ -1.49
SCAF11-212ENST00000549162 MYBPC2Q14324 1141 aa5.75□□□□□ -1.49
SCAF11-212ENST00000549162 TCEAL1Q15170 157 aa5.75□□□□□ -1.49
SCAF11-212ENST00000549162 PUS3Q9BZE2 481 aaKnown RBP5.75□□□□□ -1.49
SCAF11-212ENST00000549162 FAM198AQ9UFP1 575 aa5.75□□□□□ -1.49
SCAF11-212ENST00000549162 TRPC6Q9Y210 931 aa5.75□□□□□ -1.49
SCAF11-212ENST00000549162 FSD2A1L4K1 749 aa5.75□□□□□ -1.49
SCAF11-212ENST00000549162 MOXD2PA6NHM9 499 aa5.75□□□□□ -1.49
SCAF11-212ENST00000549162 POTECB2RU33 542 aa5.75□□□□□ -1.49
SCAF11-212ENST00000549162 C19orf81C9J6K1 198 aa5.75□□□□□ -1.49
SCAF11-212ENST00000549162 CTNND1O60716 968 aaKnown RBP5.75□□□□□ -1.49
SCAF11-212ENST00000549162 SURF6O75683 361 aaKnown RBP5.75□□□□□ -1.49
SCAF11-212ENST00000549162 RPLP2P05387 115 aaKnown RBP5.75□□□□□ -1.49
SCAF11-212ENST00000549162 CYP21A2P08686 494 aa5.75□□□□□ -1.49
SCAF11-212ENST00000549162 ZBTB48P10074 688 aaPredicted RBP5.75□□□□□ -1.49
SCAF11-212ENST00000549162 SHMT1P34896 483 aa5.75□□□□□ -1.49
SCAF11-212ENST00000549162 NUCB2P80303 420 aa5.75□□□□□ -1.49
SCAF11-212ENST00000549162 MECOMQ03112 1051 aa5.75□□□□□ -1.49
SCAF11-212ENST00000549162 NEUROD6Q96NK8 337 aa5.75□□□□□ -1.49
SCAF11-212ENST00000549162 ZMYND12Q9H0C1 365 aa5.75□□□□□ -1.49
SCAF11-212ENST00000549162 LIMCH1Q9UPQ0 1083 aa5.75□□□□□ -1.49
SCAF11-212ENST00000549162 IGKV6D-21A0A0A0MT36 114 aa5.75□□□□□ -1.49
SCAF11-212ENST00000549162 CXCL11O14625 94 aa5.75□□□□□ -1.49
SCAF11-212ENST00000549162 EVI5O60447 810 aa5.75□□□□□ -1.49
SCAF11-212ENST00000549162 IFIT2P09913 472 aaKnown RBP5.75□□□□□ -1.49
SCAF11-212ENST00000549162 VAMP1P23763 118 aa5.75□□□□□ -1.49
SCAF11-212ENST00000549162 RTP1P59025 263 aa5.75□□□□□ -1.49
SCAF11-212ENST00000549162 AP3B2Q13367 1082 aa5.75□□□□□ -1.49
SCAF11-212ENST00000549162 SCARF1Q14162 830 aa5.75□□□□□ -1.49
SCAF11-212ENST00000549162 SEPT2Q15019 361 aa5.75□□□□□ -1.49
SCAF11-212ENST00000549162 TUSC1Q2TAM9 212 aa5.75□□□□□ -1.49
SCAF11-212ENST00000549162 SESTD1Q86VW0 696 aa5.75□□□□□ -1.49
SCAF11-212ENST00000549162 SIAH1Q8IUQ4 282 aa5.75□□□□□ -1.49
SCAF11-212ENST00000549162 STRA6Q9BX79 667 aa5.75□□□□□ -1.49
SCAF11-212ENST00000549162 KCND2Q9NZV8 630 aa5.75□□□□□ -1.49
SCAF11-212ENST00000549162 POLR2AP24928 1970 aaKnown RBP5.75□□□□□ -1.49
SCAF11-212ENST00000549162 E7EWF7 191 aa5.74□□□□□ -1.49
SCAF11-212ENST00000549162 MAP3K7O43318 606 aa5.74□□□□□ -1.49
SCAF11-212ENST00000549162 PLIN1O60240 522 aa5.74□□□□□ -1.49
SCAF11-212ENST00000549162 CTDNEP1O95476 244 aa5.74□□□□□ -1.49
SCAF11-212ENST00000549162 XRCC6P12956 609 aaKnown RBP eCLIP5.74□□□□□ -1.495e-9■□□□□ 8.2
SCAF11-212ENST00000549162 PHKA1P46020 1223 aa5.74□□□□□ -1.49
SCAF11-212ENST00000549162 RESTQ13127 1097 aa5.74□□□□□ -1.49
SCAF11-212ENST00000549162 LDHAL6AQ6ZMR3 332 aa5.74□□□□□ -1.49
SCAF11-212ENST00000549162 DPH6Q7L8W6 267 aa5.74□□□□□ -1.49
SCAF11-212ENST00000549162 AACSQ86V21 672 aa5.74□□□□□ -1.49
SCAF11-212ENST00000549162 FAM160B2Q86V87 743 aa5.74□□□□□ -1.49
SCAF11-212ENST00000549162 TRMT44Q8IYL2 757 aaKnown RBP5.74□□□□□ -1.49
SCAF11-212ENST00000549162 MPNDQ8N594 471 aa5.74□□□□□ -1.49
SCAF11-212ENST00000549162 MB21D1Q8N884 522 aa5.74□□□□□ -1.49
SCAF11-212ENST00000549162 RBM46Q8TBY0 533 aaKnown RBP5.74□□□□□ -1.49
SCAF11-212ENST00000549162 WASF1Q92558 559 aa5.74□□□□□ -1.49
SCAF11-212ENST00000549162 RCOR1Q9UKL0 485 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms