RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 COG2Q14746 738 aa16.52■□□□□ 0.24
CDX2-202ENST00000548877 RAB3GAP1Q15042 981 aa16.52■□□□□ 0.24
CDX2-202ENST00000548877 TRIM60Q495X7 471 aa16.52■□□□□ 0.24
CDX2-202ENST00000548877 DPP9Q86TI2 863 aa16.52■□□□□ 0.24
CDX2-202ENST00000548877 ABRAQ8N0Z2 381 aa16.52■□□□□ 0.24
CDX2-202ENST00000548877 SSH3Q8TE77 659 aa16.52■□□□□ 0.24
CDX2-202ENST00000548877 MYLIPQ8WY64 445 aa16.52■□□□□ 0.24
CDX2-202ENST00000548877 TRIM43Q96BQ3 446 aaPredicted RBP16.52■□□□□ 0.24
CDX2-202ENST00000548877 CABP5Q9NP86 173 aa16.52■□□□□ 0.24
CDX2-202ENST00000548877 MUC3AQ02505 3323 aa16.51■□□□□ 0.23
CDX2-202ENST00000548877 COBLO75128 1261 aa16.51■□□□□ 0.23
CDX2-202ENST00000548877 USP5P45974 858 aa16.51■□□□□ 0.23
CDX2-202ENST00000548877 GABPAQ06546 454 aa16.51■□□□□ 0.23
CDX2-202ENST00000548877 LRRC41Q15345 812 aa16.51■□□□□ 0.23
CDX2-202ENST00000548877 SPATC1LQ9H0A9 340 aa16.51■□□□□ 0.23
CDX2-202ENST00000548877 NRBP1Q9UHY1 535 aa16.51■□□□□ 0.23
CDX2-202ENST00000548877 IPO8O15397 1037 aaKnown RBP16.5■□□□□ 0.23
CDX2-202ENST00000548877 TRIM27P14373 513 aa16.5■□□□□ 0.23
CDX2-202ENST00000548877 ADCYAP1R1P41586 468 aa16.5■□□□□ 0.23
CDX2-202ENST00000548877 SH3RF1Q7Z6J0 888 aa16.5■□□□□ 0.23
CDX2-202ENST00000548877 MB21D1Q8N884 522 aa16.5■□□□□ 0.23
CDX2-202ENST00000548877 MROH8Q9H579 483 aa16.5■□□□□ 0.23
CDX2-202ENST00000548877 PRDM5Q9NQX1 630 aaPredicted RBP16.5■□□□□ 0.23
CDX2-202ENST00000548877 SLC5A4Q9NY91 659 aa16.5■□□□□ 0.23
CDX2-202ENST00000548877 DBNLQ9UJU6 430 aaKnown RBP16.5■□□□□ 0.23
CDX2-202ENST00000548877 PHF24Q9UPV7 400 aa16.5■□□□□ 0.23
CDX2-202ENST00000548877 NOP58Q9Y2X3 529 aaKnown RBP16.5■□□□□ 0.23
CDX2-202ENST00000548877 TACC3Q9Y6A5 838 aa16.5■□□□□ 0.23
CDX2-202ENST00000548877 KIAA0355O15063 1070 aa16.49■□□□□ 0.23
CDX2-202ENST00000548877 FOSL2P15408 326 aa16.49■□□□□ 0.23
CDX2-202ENST00000548877 ERCC3P19447 782 aa16.49■□□□□ 0.23
CDX2-202ENST00000548877 PARP14Q460N5 1801 aa16.49■□□□□ 0.23
CDX2-202ENST00000548877 A0A1W2PRG0 241 aa16.48■□□□□ 0.23
CDX2-202ENST00000548877 ITGB8P26012 769 aa16.48■□□□□ 0.23
CDX2-202ENST00000548877 PLCD1P51178 756 aa16.48■□□□□ 0.23
CDX2-202ENST00000548877 ATP8B2P98198 1209 aa16.48■□□□□ 0.23
CDX2-202ENST00000548877 TLE2Q04725 743 aa16.48■□□□□ 0.23
CDX2-202ENST00000548877 SEPT2Q15019 361 aa16.48■□□□□ 0.23
CDX2-202ENST00000548877 MIGA1Q8NAN2 632 aa16.48■□□□□ 0.23
CDX2-202ENST00000548877 MAML3Q96JK9 1138 aa16.48■□□□□ 0.23
CDX2-202ENST00000548877 RIOK1Q9BRS2 568 aaKnown RBP16.48■□□□□ 0.23
CDX2-202ENST00000548877 ROBO3Q96MS0 1386 aa16.48■□□□□ 0.23
CDX2-202ENST00000548877 IDH1O75874 414 aaKnown RBP16.47■□□□□ 0.23
CDX2-202ENST00000548877 DSG3P32926 999 aa16.47■□□□□ 0.23
CDX2-202ENST00000548877 ANO1Q5XXA6 986 aa16.47■□□□□ 0.23
CDX2-202ENST00000548877 MAGEB6Q8N7X4 407 aa16.47■□□□□ 0.23
CDX2-202ENST00000548877 NAV1Q8NEY1 1877 aa16.46■□□□□ 0.23
CDX2-202ENST00000548877 SURF6O75683 361 aaKnown RBP16.46■□□□□ 0.23
CDX2-202ENST00000548877 CLTBP09497 229 aa16.46■□□□□ 0.23
CDX2-202ENST00000548877 EPHB4P54760 987 aa16.46■□□□□ 0.23
CDX2-202ENST00000548877 FAM47AQ5JRC9 791 aa16.46■□□□□ 0.23
CDX2-202ENST00000548877 TJAP1Q5JTD0 557 aa16.46■□□□□ 0.23
CDX2-202ENST00000548877 PRAMEF19Q5SWL8 479 aa16.46■□□□□ 0.23
CDX2-202ENST00000548877 EAF2Q96CJ1 260 aaPredicted RBP16.46■□□□□ 0.23
CDX2-202ENST00000548877 RNPC3Q96LT9 517 aaKnown RBP16.46■□□□□ 0.23
CDX2-202ENST00000548877 YTHDC1Q96MU7 727 aaKnown RBP16.46■□□□□ 0.23
CDX2-202ENST00000548877 DIS3Q9Y2L1 958 aaKnown RBP16.46■□□□□ 0.23
CDX2-202ENST00000548877 MAP3K12Q12852 859 aa16.45■□□□□ 0.22
CDX2-202ENST00000548877 FERMT2Q96AC1 680 aa16.45■□□□□ 0.22
CDX2-202ENST00000548877 TOX2Q96NM4 488 aa16.45■□□□□ 0.22
CDX2-202ENST00000548877 TLR7Q9NYK1 1049 aaKnown RBP16.45■□□□□ 0.22
CDX2-202ENST00000548877 ADAMTS5Q9UNA0 930 aa16.45■□□□□ 0.22
CDX2-202ENST00000548877 TNNQ9UQP3 1299 aa16.45■□□□□ 0.22
CDX2-202ENST00000548877 PLXNA1Q9UIW2 1896 aa16.45■□□□□ 0.22
CDX2-202ENST00000548877 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.44■□□□□ 0.22
CDX2-202ENST00000548877 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.44■□□□□ 0.22
CDX2-202ENST00000548877 SLC25A27O95847 323 aa16.44■□□□□ 0.22
CDX2-202ENST00000548877 RARBP10826 455 aa16.44■□□□□ 0.22
CDX2-202ENST00000548877 FCER1AP12319 257 aa16.44■□□□□ 0.22
CDX2-202ENST00000548877 OS9Q13438 667 aaPredicted RBP16.44■□□□□ 0.22
CDX2-202ENST00000548877 KIAA1755Q5JYT7 1200 aa16.44■□□□□ 0.22
CDX2-202ENST00000548877 TMEM179Q6ZVK1 233 aa16.44■□□□□ 0.22
CDX2-202ENST00000548877 ANKRD33Q7Z3H0 272 aa16.44■□□□□ 0.22
CDX2-202ENST00000548877 RNF180Q86T96 592 aa16.44■□□□□ 0.22
CDX2-202ENST00000548877 SIAH1Q8IUQ4 282 aa16.44■□□□□ 0.22
CDX2-202ENST00000548877 TANGO6Q9C0B7 1094 aa16.44■□□□□ 0.22
CDX2-202ENST00000548877 ANTXR1Q9H6X2 564 aa16.44■□□□□ 0.22
CDX2-202ENST00000548877 XPNPEP3Q9NQH7 507 aa16.44■□□□□ 0.22
CDX2-202ENST00000548877 COL11A1P12107 1806 aaPredicted RBP16.43■□□□□ 0.22
CDX2-202ENST00000548877 POLR3DP05423 398 aaPredicted RBP16.43■□□□□ 0.22
CDX2-202ENST00000548877 GRIN2CQ14957 1233 aa16.43■□□□□ 0.22
CDX2-202ENST00000548877 TSEN34Q9BSV6 310 aaKnown RBP16.43■□□□□ 0.22
CDX2-202ENST00000548877 CCDC8Q9H0W5 538 aaPredicted RBP16.43■□□□□ 0.22
CDX2-202ENST00000548877 TMX2Q9Y320 296 aa16.43■□□□□ 0.22
CDX2-202ENST00000548877 MYH8P13535 1937 aa16.43■□□□□ 0.22
CDX2-202ENST00000548877 TNFRSF10AO00220 468 aa16.42■□□□□ 0.22
CDX2-202ENST00000548877 RAG1P15918 1043 aa16.42■□□□□ 0.22
CDX2-202ENST00000548877 DNAJB2P25686 324 aa16.42■□□□□ 0.22
CDX2-202ENST00000548877 FPGSQ05932 587 aa16.42■□□□□ 0.22
CDX2-202ENST00000548877 ZNF792Q3KQV3 632 aa16.42■□□□□ 0.22
CDX2-202ENST00000548877 NCAPG2Q86XI2 1143 aa16.42■□□□□ 0.22
CDX2-202ENST00000548877 TMEM57Q8N5G2 664 aa16.42■□□□□ 0.22
CDX2-202ENST00000548877 USP38Q8NB14 1042 aa16.42■□□□□ 0.22
CDX2-202ENST00000548877 ATG4CQ96DT6 458 aa16.42■□□□□ 0.22
CDX2-202ENST00000548877 TINF2Q9BSI4 451 aa16.42■□□□□ 0.22
CDX2-202ENST00000548877 SWAP70Q9UH65 585 aa16.42■□□□□ 0.22
CDX2-202ENST00000548877 MAGEB6P1A0A0J9YX57 407 aa16.41■□□□□ 0.22
CDX2-202ENST00000548877 A0A1W2PQ45 241 aaPredicted RBP16.41■□□□□ 0.22
CDX2-202ENST00000548877 A0A1W2PQY0 241 aa16.41■□□□□ 0.22
CDX2-202ENST00000548877 WDR46O15213 610 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms