RNA–Protein interactions for RNA: ENST00000547637.1

SMARCD1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, human

TSL 2

Gene SMARCD1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCD1-204	ENST00000547637	UBE2O	Q9C0C9	1292 aa	Known RBP	27.83	■■■□□ 2.05
SMARCD1-204	ENST00000547637	ZBTB40	Q9NUA8	1239 aa		27.83	■■■□□ 2.05
SMARCD1-204	ENST00000547637	COG6	Q9Y2V7	657 aa		27.83	■■■□□ 2.05
SMARCD1-204	ENST00000547637	PFAS	O15067	1338 aa		27.83	■■■□□ 2.05
SMARCD1-204	ENST00000547637	TCRBV5S4A2T	A0A5A2	114 aa		27.82	■■■□□ 2.04
SMARCD1-204	ENST00000547637	COL6A1	P12109	1028 aa		27.82	■■■□□ 2.04
SMARCD1-204	ENST00000547637	ZSCAN25	Q6NSZ9	544 aa		27.82	■■■□□ 2.04
SMARCD1-204	ENST00000547637	GPR153	Q6NV75	609 aa		27.82	■■■□□ 2.04
SMARCD1-204	ENST00000547637	BOLA2	Q9H3K6	86 aa		27.82	■■■□□ 2.04
SMARCD1-204	ENST00000547637	DDX20	Q9UHI6	824 aa	Known RBP	27.82	■■■□□ 2.04
SMARCD1-204	ENST00000547637	MAGEA10	P43363	369 aa	Predicted RBP	27.81	■■■□□ 2.04
SMARCD1-204	ENST00000547637	SHCBP1	Q8NEM2	672 aa		27.81	■■■□□ 2.04
SMARCD1-204	ENST00000547637	ARMT1	Q9H993	441 aa		27.81	■■■□□ 2.04
SMARCD1-204	ENST00000547637		A0A1W2PRG0	241 aa		27.8	■■■□□ 2.04
SMARCD1-204	ENST00000547637	ATP5J	P18859	108 aa		27.8	■■■□□ 2.04
SMARCD1-204	ENST00000547637	ADD2	P35612	726 aa		27.8	■■■□□ 2.04
SMARCD1-204	ENST00000547637	TDH	Q8IZJ6	230 aa		27.8	■■■□□ 2.04
SMARCD1-204	ENST00000547637	SPATC1L	Q9H0A9	340 aa		27.8	■■■□□ 2.04
SMARCD1-204	ENST00000547637	MBD4	O95243	580 aa		27.79	■■■□□ 2.04
SMARCD1-204	ENST00000547637	PLS1	Q14651	629 aa		27.79	■■■□□ 2.04
SMARCD1-204	ENST00000547637	LRCH3	Q96II8	777 aa		27.79	■■■□□ 2.04
SMARCD1-204	ENST00000547637	SENP6	Q9GZR1	1112 aa	Predicted RBP	27.79	■■■□□ 2.04
SMARCD1-204	ENST00000547637	MROH8	Q9H579	483 aa		27.79	■■■□□ 2.04
SMARCD1-204	ENST00000547637	FLRT1	Q9NZU1	646 aa		27.79	■■■□□ 2.04
SMARCD1-204	ENST00000547637	RANBP2	P49792	3224 aa	Known RBP	27.78	■■■□□ 2.04
SMARCD1-204	ENST00000547637	SOX1	O00570	391 aa	Predicted RBP	27.78	■■■□□ 2.04
SMARCD1-204	ENST00000547637	FLOT1	O75955	427 aa		27.78	■■■□□ 2.04
SMARCD1-204	ENST00000547637	ICA1	Q05084	483 aa		27.78	■■■□□ 2.04
SMARCD1-204	ENST00000547637	UBE3C	Q15386	1083 aa		27.78	■■■□□ 2.04
SMARCD1-204	ENST00000547637	LRIT3	Q3SXY7	679 aa		27.78	■■■□□ 2.04
SMARCD1-204	ENST00000547637	ARRDC4	Q8NCT1	418 aa		27.78	■■■□□ 2.04
SMARCD1-204	ENST00000547637	HAUS7	Q99871	368 aa		27.78	■■■□□ 2.04
SMARCD1-204	ENST00000547637	MOV10L1	Q9BXT6	1211 aa	Known RBP	27.78	■■■□□ 2.04
SMARCD1-204	ENST00000547637	ADORA2A	P29274	412 aa		27.77	■■■□□ 2.04
SMARCD1-204	ENST00000547637	DSG3	P32926	999 aa		27.77	■■■□□ 2.04
SMARCD1-204	ENST00000547637	OLFML2B	Q68BL8	750 aa		27.77	■■■□□ 2.04
SMARCD1-204	ENST00000547637	SIRT2	Q8IXJ6	389 aa		27.77	■■■□□ 2.04
SMARCD1-204	ENST00000547637	NPLOC4	Q8TAT6	608 aa		27.77	■■■□□ 2.04
SMARCD1-204	ENST00000547637	LBHD1	Q9BQE6	289 aa	Predicted RBP	27.77	■■■□□ 2.04
SMARCD1-204	ENST00000547637	PRKAG2	Q9UGJ0	569 aa		27.77	■■■□□ 2.04
SMARCD1-204	ENST00000547637	TMX2	Q9Y320	296 aa		27.77	■■■□□ 2.04
SMARCD1-204	ENST00000547637	MYH8	P13535	1937 aa		27.77	■■■□□ 2.04
SMARCD1-204	ENST00000547637	CYP2D6	P10635	497 aa		27.76	■■■□□ 2.03
SMARCD1-204	ENST00000547637	ERCC3	P19447	782 aa		27.76	■■■□□ 2.03
SMARCD1-204	ENST00000547637	CYP2C19	P33261	490 aa		27.76	■■■□□ 2.03
SMARCD1-204	ENST00000547637	LRRC26	Q2I0M4	334 aa		27.76	■■■□□ 2.03
SMARCD1-204	ENST00000547637	ABRA	Q8N0Z2	381 aa		27.76	■■■□□ 2.03
SMARCD1-204	ENST00000547637	SLC44A5	Q8NCS7	719 aa		27.76	■■■□□ 2.03
SMARCD1-204	ENST00000547637	DYNLL2	Q96FJ2	89 aa		27.76	■■■□□ 2.03
SMARCD1-204	ENST00000547637	VCPKMT	Q9H867	229 aa		27.76	■■■□□ 2.03
SMARCD1-204	ENST00000547637	DNM1L	O00429	736 aa		27.75	■■■□□ 2.03
SMARCD1-204	ENST00000547637	CDK8	P49336	464 aa		27.75	■■■□□ 2.03
SMARCD1-204	ENST00000547637	C12orf60	Q5U649	245 aa		27.75	■■■□□ 2.03
SMARCD1-204	ENST00000547637	NCAPG2	Q86XI2	1143 aa		27.75	■■■□□ 2.03
SMARCD1-204	ENST00000547637	SLC17A8	Q8NDX2	589 aa		27.75	■■■□□ 2.03
SMARCD1-204	ENST00000547637	LRRCC1	Q9C099	1032 aa		27.75	■■■□□ 2.03
SMARCD1-204	ENST00000547637	SLC4A4	Q9Y6R1	1079 aa		27.75	■■■□□ 2.03
SMARCD1-204	ENST00000547637	USP17L12	C9JPN9	530 aa		27.74	■■■□□ 2.03
SMARCD1-204	ENST00000547637	USP17L21	D6R901	530 aa		27.74	■■■□□ 2.03
SMARCD1-204	ENST00000547637	WDR46	O15213	610 aa	Known RBP	27.74	■■■□□ 2.03
SMARCD1-204	ENST00000547637	PRKAB2	O43741	272 aa		27.74	■■■□□ 2.03
SMARCD1-204	ENST00000547637	SLC25A27	O95847	323 aa		27.74	■■■□□ 2.03
SMARCD1-204	ENST00000547637	AKR1B1	P15121	316 aa		27.74	■■■□□ 2.03
SMARCD1-204	ENST00000547637	KANSL2	Q9H9L4	492 aa		27.74	■■■□□ 2.03
SMARCD1-204	ENST00000547637	FCER1A	P12319	257 aa		27.73	■■■□□ 2.03
SMARCD1-204	ENST00000547637	SAMD1	Q6SPF0	538 aa	Predicted RBP	27.73	■■■□□ 2.03
SMARCD1-204	ENST00000547637	SPICE1	Q8N0Z3	855 aa		27.73	■■■□□ 2.03
SMARCD1-204	ENST00000547637	GOPC	Q9HD26	462 aa		27.73	■■■□□ 2.03
SMARCD1-204	ENST00000547637	RCAN3	Q9UKA8	241 aa		27.73	■■■□□ 2.03
SMARCD1-204	ENST00000547637	SZT2	Q5T011	3432 aa		27.73	■■■□□ 2.03
SMARCD1-204	ENST00000547637	KBTBD13	C9JR72	458 aa		27.72	■■■□□ 2.03
SMARCD1-204	ENST00000547637	CYBA	P13498	195 aa		27.72	■■■□□ 2.03
SMARCD1-204	ENST00000547637	EVX2	Q03828	476 aa		27.72	■■■□□ 2.03
SMARCD1-204	ENST00000547637	C16orf86	Q6ZW13	317 aa		27.72	■■■□□ 2.03
SMARCD1-204	ENST00000547637	DEFB123	Q8N688	67 aa		27.71	■■■□□ 2.03
SMARCD1-204	ENST00000547637	SEPT4	O43236	478 aa		27.7	■■■□□ 2.02
SMARCD1-204	ENST00000547637	MDM2	Q00987	491 aa	Predicted RBP	27.7	■■■□□ 2.02
SMARCD1-204	ENST00000547637	ATG4C	Q96DT6	458 aa		27.7	■■■□□ 2.02
SMARCD1-204	ENST00000547637	ARPP21	Q9UBL0	812 aa	Predicted RBP	27.7	■■■□□ 2.02
SMARCD1-204	ENST00000547637	BAZ2A	Q9UIF9	1905 aa	Known RBP	27.7	■■■□□ 2.02
SMARCD1-204	ENST00000547637	RAD21	O60216	631 aa		27.69	■■■□□ 2.02
SMARCD1-204	ENST00000547637	EEF2	P13639	858 aa	Known RBP	27.69	■■■□□ 2.02
SMARCD1-204	ENST00000547637	COPB2	P35606	906 aa		27.69	■■■□□ 2.02
SMARCD1-204	ENST00000547637	ATN1	P54259	1190 aa	Predicted RBP	27.69	■■■□□ 2.02
SMARCD1-204	ENST00000547637	GPATCH3	Q96I76	525 aa		27.69	■■■□□ 2.02
SMARCD1-204	ENST00000547637	KIAA1755	Q5JYT7	1200 aa		27.68	■■■□□ 2.02
SMARCD1-204	ENST00000547637	GJC2	Q5T442	439 aa	Predicted RBP	27.68	■■■□□ 2.02
SMARCD1-204	ENST00000547637	SIAH1	Q8IUQ4	282 aa		27.68	■■■□□ 2.02
SMARCD1-204	ENST00000547637	TRPV1	Q8NER1	839 aa		27.68	■■■□□ 2.02
SMARCD1-204	ENST00000547637	FRMPD3	Q5JV73	1810 aa		27.68	■■■□□ 2.02
SMARCD1-204	ENST00000547637	ZNF236	Q9UL36	1845 aa		27.67	■■■□□ 2.02
SMARCD1-204	ENST00000547637	COBL	O75128	1261 aa		27.67	■■■□□ 2.02
SMARCD1-204	ENST00000547637	IGHA2	P01877	340 aa		27.67	■■■□□ 2.02
SMARCD1-204	ENST00000547637	MYCN	P04198	464 aa	Predicted RBP	27.67	■■■□□ 2.02
SMARCD1-204	ENST00000547637	SLFNL1	Q499Z3	407 aa		27.67	■■■□□ 2.02
SMARCD1-204	ENST00000547637	CTR9	Q6PD62	1173 aa		27.67	■■■□□ 2.02
SMARCD1-204	ENST00000547637	MKNK2	Q9HBH9	465 aa		27.67	■■■□□ 2.02
SMARCD1-204	ENST00000547637	ECHDC1	Q9NTX5	307 aa		27.67	■■■□□ 2.02
SMARCD1-204	ENST00000547637	NRBP1	Q9UHY1	535 aa		27.67	■■■□□ 2.02
SMARCD1-204	ENST00000547637	CYP2D7	A0A087X1C5	515 aa		27.66	■■■□□ 2.02

Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms