RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 GSG1L2A8MUP6 293 aa20.24■□□□□ 0.83
RBFOX1-207ENST00000547338 LACTBP83111 547 aaPredicted RBP20.24■□□□□ 0.83
RBFOX1-207ENST00000547338 MTMR2Q13614 643 aa20.24■□□□□ 0.83
RBFOX1-207ENST00000547338 C12orf60Q5U649 245 aa20.24■□□□□ 0.83
RBFOX1-207ENST00000547338 FBXO46Q6PJ61 603 aaPredicted RBP20.24■□□□□ 0.83
RBFOX1-207ENST00000547338 SEC62Q99442 399 aaKnown RBP20.24■□□□□ 0.83
RBFOX1-207ENST00000547338 PARK7Q99497 189 aaKnown RBP20.24■□□□□ 0.83
RBFOX1-207ENST00000547338 GZF1Q9H116 711 aaPredicted RBP20.24■□□□□ 0.83
RBFOX1-207ENST00000547338 USP17L12C9JPN9 530 aa20.23■□□□□ 0.83
RBFOX1-207ENST00000547338 USP17L21D6R901 530 aa20.23■□□□□ 0.83
RBFOX1-207ENST00000547338 BACE1P56817 501 aa20.23■□□□□ 0.83
RBFOX1-207ENST00000547338 ZNF445P59923 1031 aa20.23■□□□□ 0.83
RBFOX1-207ENST00000547338 PKP1Q13835 747 aa20.23■□□□□ 0.83
RBFOX1-207ENST00000547338 EPB41L4AQ9HCS5 686 aaPredicted RBP20.23■□□□□ 0.83
RBFOX1-207ENST00000547338 PDCP20941 246 aa20.22■□□□□ 0.83
RBFOX1-207ENST00000547338 RPS6KB1P23443 525 aa20.22■□□□□ 0.83
RBFOX1-207ENST00000547338 CSPP1Q1MSJ5 1256 aa20.22■□□□□ 0.83
RBFOX1-207ENST00000547338 CERKLQ49MI3 558 aaPredicted RBP20.22■□□□□ 0.83
RBFOX1-207ENST00000547338 ZMYM1Q5SVZ6 1142 aa20.22■□□□□ 0.83
RBFOX1-207ENST00000547338 CTR9Q6PD62 1173 aa20.22■□□□□ 0.83
RBFOX1-207ENST00000547338 EFCC1Q9HA90 598 aa20.22■□□□□ 0.83
RBFOX1-207ENST00000547338 AS3MTQ9HBK9 375 aa20.22■□□□□ 0.83
RBFOX1-207ENST00000547338 PTPN22Q9Y2R2 807 aa20.22■□□□□ 0.83
RBFOX1-207ENST00000547338 GPAA1O43292 621 aa20.22■□□□□ 0.83
RBFOX1-207ENST00000547338 ABCB5Q2M3G0 1257 aa20.22■□□□□ 0.83
RBFOX1-207ENST00000547338 ADCK5Q3MIX3 580 aa20.22■□□□□ 0.83
RBFOX1-207ENST00000547338 EMILIN3Q9NT22 766 aa20.22■□□□□ 0.83
RBFOX1-207ENST00000547338 FOXP2O15409 715 aa20.21■□□□□ 0.83
RBFOX1-207ENST00000547338 XRCC6P12956 609 aaKnown RBP eCLIP20.21■□□□□ 0.83
RBFOX1-207ENST00000547338 NCLP19338 710 aaKnown RBP20.21■□□□□ 0.83
RBFOX1-207ENST00000547338 TMEM87AQ8NBN3 555 aa20.21■□□□□ 0.83
RBFOX1-207ENST00000547338 ACER1Q8TDN7 264 aa20.21■□□□□ 0.83
RBFOX1-207ENST00000547338 TRIM47Q96LD4 638 aa20.21■□□□□ 0.83
RBFOX1-207ENST00000547338 GRPEL1Q9HAV7 217 aa20.21■□□□□ 0.83
RBFOX1-207ENST00000547338 MYH8P13535 1937 aa20.21■□□□□ 0.83
RBFOX1-207ENST00000547338 PRPF40AO75400 957 aaKnown RBP20.2■□□□□ 0.82
RBFOX1-207ENST00000547338 ZSCAN22P10073 491 aaPredicted RBP20.2■□□□□ 0.82
RBFOX1-207ENST00000547338 ZNF589Q86UQ0 364 aaPredicted RBP20.2■□□□□ 0.82
RBFOX1-207ENST00000547338 SYAP1Q96A49 352 aaPredicted RBP20.2■□□□□ 0.82
RBFOX1-207ENST00000547338 MGAMO43451 1857 aa20.19■□□□□ 0.82
RBFOX1-207ENST00000547338 USP17L10C9JJH3 530 aa20.19■□□□□ 0.82
RBFOX1-207ENST00000547338 STX6O43752 255 aa20.19■□□□□ 0.82
RBFOX1-207ENST00000547338 SEPT2Q15019 361 aa20.19■□□□□ 0.82
RBFOX1-207ENST00000547338 POTEEQ6S8J3 1075 aa20.19■□□□□ 0.82
RBFOX1-207ENST00000547338 C16orf86Q6ZW13 317 aa20.19■□□□□ 0.82
RBFOX1-207ENST00000547338 NOL8Q76FK4 1167 aaKnown RBP20.19■□□□□ 0.82
RBFOX1-207ENST00000547338 NEK1Q96PY6 1258 aa20.19■□□□□ 0.82
RBFOX1-207ENST00000547338 ASCC2Q9H1I8 757 aaPredicted RBP20.19■□□□□ 0.82
RBFOX1-207ENST00000547338 ECM2O94769 699 aaPredicted RBP20.18■□□□□ 0.82
RBFOX1-207ENST00000547338 AKR1B1P15121 316 aa20.18■□□□□ 0.82
RBFOX1-207ENST00000547338 CDK8P49336 464 aa20.18■□□□□ 0.82
RBFOX1-207ENST00000547338 SBK1Q52WX2 424 aa20.18■□□□□ 0.82
RBFOX1-207ENST00000547338 SIAH1Q8IUQ4 282 aa20.18■□□□□ 0.82
RBFOX1-207ENST00000547338 SWAP70Q9UH65 585 aa20.18■□□□□ 0.82
RBFOX1-207ENST00000547338 CTNNA3Q9UI47 895 aa20.18■□□□□ 0.82
RBFOX1-207ENST00000547338 GREB1LQ9C091 1923 aaPredicted RBP20.18■□□□□ 0.82
RBFOX1-207ENST00000547338 A0A1W2PRG0 241 aa20.17■□□□□ 0.82
RBFOX1-207ENST00000547338 C19orf81C9J6K1 198 aa20.17■□□□□ 0.82
RBFOX1-207ENST00000547338 GIMAP6Q6P9H5 292 aa20.17■□□□□ 0.82
RBFOX1-207ENST00000547338 CLEC10AQ8IUN9 316 aa20.17■□□□□ 0.82
RBFOX1-207ENST00000547338 C12orf42Q96LP6 360 aa20.17■□□□□ 0.82
RBFOX1-207ENST00000547338 TAOK2Q9UL54 1235 aa20.17■□□□□ 0.82
RBFOX1-207ENST00000547338 PTCH2Q9Y6C5 1203 aa20.17■□□□□ 0.82
RBFOX1-207ENST00000547338 ROBO3Q96MS0 1386 aa20.17■□□□□ 0.82
RBFOX1-207ENST00000547338 SYT1P21579 422 aa20.17■□□□□ 0.82
RBFOX1-207ENST00000547338 HOXA7P31268 230 aaPredicted RBP20.17■□□□□ 0.82
RBFOX1-207ENST00000547338 CCDC129Q6ZRS4 1044 aa20.17■□□□□ 0.82
RBFOX1-207ENST00000547338 KIAA1683Q9H0B3 1180 aa20.17■□□□□ 0.82
RBFOX1-207ENST00000547338 ARPP21Q9UBL0 812 aaPredicted RBP20.17■□□□□ 0.82
RBFOX1-207ENST00000547338 PEX10O60683 326 aa20.16■□□□□ 0.82
RBFOX1-207ENST00000547338 PSMC4P43686 418 aa20.16■□□□□ 0.82
RBFOX1-207ENST00000547338 ME3Q16798 604 aa20.16■□□□□ 0.82
RBFOX1-207ENST00000547338 OSBPP22059 807 aa20.15■□□□□ 0.82
RBFOX1-207ENST00000547338 RGS19P49795 217 aa20.15■□□□□ 0.82
RBFOX1-207ENST00000547338 SOX10P56693 466 aa20.15■□□□□ 0.82
RBFOX1-207ENST00000547338 ZYXQ15942 572 aaKnown RBP20.15■□□□□ 0.82
RBFOX1-207ENST00000547338 KIAA1755Q5JYT7 1200 aa20.15■□□□□ 0.82
RBFOX1-207ENST00000547338 USP17L2Q6R6M4 530 aa20.15■□□□□ 0.82
RBFOX1-207ENST00000547338 FBXL16Q8N461 479 aa20.15■□□□□ 0.82
RBFOX1-207ENST00000547338 ANKRD13CQ8N6S4 541 aa20.15■□□□□ 0.82
RBFOX1-207ENST00000547338 SMCR8Q8TEV9 937 aaPredicted RBP20.15■□□□□ 0.82
RBFOX1-207ENST00000547338 P2RX7Q99572 595 aaKnown RBP20.15■□□□□ 0.82
RBFOX1-207ENST00000547338 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.15■□□□□ 0.82
RBFOX1-207ENST00000547338 CABP5Q9NP86 173 aa20.15■□□□□ 0.82
RBFOX1-207ENST00000547338 TMOD4Q9NZQ9 345 aa20.15■□□□□ 0.82
RBFOX1-207ENST00000547338 TNRC18O15417 2968 aaPredicted RBP20.14■□□□□ 0.82
RBFOX1-207ENST00000547338 BRCA2P51587 3418 aa20.14■□□□□ 0.82
RBFOX1-207ENST00000547338 PATL2C9JE40 543 aaKnown RBP20.14■□□□□ 0.81
RBFOX1-207ENST00000547338 F13A1P00488 732 aa20.14■□□□□ 0.81
RBFOX1-207ENST00000547338 GNAT2P19087 354 aa20.14■□□□□ 0.81
RBFOX1-207ENST00000547338 GJB2P29033 226 aa20.14■□□□□ 0.81
RBFOX1-207ENST00000547338 TMEM179Q6ZVK1 233 aa20.14■□□□□ 0.81
RBFOX1-207ENST00000547338 CCDC83Q8IWF9 413 aa20.14■□□□□ 0.81
RBFOX1-207ENST00000547338 IFNL3Q8IZI9 196 aa20.14■□□□□ 0.81
RBFOX1-207ENST00000547338 ARMC5Q96C12 935 aa20.14■□□□□ 0.81
RBFOX1-207ENST00000547338 PNMA3Q9UL41 463 aa20.14■□□□□ 0.81
RBFOX1-207ENST00000547338 TPCN1Q9ULQ1 816 aa20.14■□□□□ 0.81
RBFOX1-207ENST00000547338 DOCK3Q8IZD9 2030 aa20.14■□□□□ 0.81
RBFOX1-207ENST00000547338 MPHOSPH10O00566 681 aaKnown RBP20.13■□□□□ 0.81
RBFOX1-207ENST00000547338 LETM1O95202 739 aaPredicted RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms