RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 MYO1FO00160 1098 aa12.05□□□□□ -0.48
NPAS3-205ENST00000547068 MYBL2P10244 700 aa12.05□□□□□ -0.48
NPAS3-205ENST00000547068 ANTXR2P58335 489 aa12.05□□□□□ -0.48
NPAS3-205ENST00000547068 DDR1Q08345 913 aa12.05□□□□□ -0.48
NPAS3-205ENST00000547068 TRIM29Q14134 588 aa12.05□□□□□ -0.48
NPAS3-205ENST00000547068 TTC19Q6DKK2 380 aaPredicted RBP12.05□□□□□ -0.48
NPAS3-205ENST00000547068 CCNI2Q6ZMN8 369 aaPredicted RBP12.05□□□□□ -0.48
NPAS3-205ENST00000547068 OTUD6BQ8N6M0 293 aa12.05□□□□□ -0.48
NPAS3-205ENST00000547068 RPGRIP1Q96KN7 1286 aa12.05□□□□□ -0.48
NPAS3-205ENST00000547068 CAPZA3Q96KX2 299 aa12.05□□□□□ -0.48
NPAS3-205ENST00000547068 GNL3LQ9NVN8 582 aaKnown RBP12.05□□□□□ -0.48
NPAS3-205ENST00000547068 SAR1BQ9Y6B6 198 aa12.05□□□□□ -0.48
NPAS3-205ENST00000547068 SYNRGQ9UMZ2 1314 aa12.05□□□□□ -0.48
NPAS3-205ENST00000547068 SRGAP2O75044 1071 aa12.04□□□□□ -0.48
NPAS3-205ENST00000547068 CDKL5O76039 1030 aa12.04□□□□□ -0.48
NPAS3-205ENST00000547068 GPTP24298 496 aa12.04□□□□□ -0.48
NPAS3-205ENST00000547068 B4GALNT4Q76KP1 1039 aa12.04□□□□□ -0.48
NPAS3-205ENST00000547068 STK11IPQ8N1F8 1099 aa12.04□□□□□ -0.48
NPAS3-205ENST00000547068 STAG1Q8WVM7 1258 aa12.04□□□□□ -0.48
NPAS3-205ENST00000547068 FAM212AQ96EL1 285 aa12.04□□□□□ -0.48
NPAS3-205ENST00000547068 NUP88Q99567 741 aaPredicted RBP12.04□□□□□ -0.48
NPAS3-205ENST00000547068 TRIM10Q9UDY6 481 aa12.04□□□□□ -0.48
NPAS3-205ENST00000547068 ITIH6Q6UXX5 1313 aa12.04□□□□□ -0.48
NPAS3-205ENST00000547068 PSMD14O00487 310 aa12.04□□□□□ -0.48
NPAS3-205ENST00000547068 RDXP35241 583 aaKnown RBP12.04□□□□□ -0.48
NPAS3-205ENST00000547068 METAP2P50579 478 aaKnown RBP eCLIP12.04□□□□□ -0.48
NPAS3-205ENST00000547068 GRIN1Q05586 938 aa12.04□□□□□ -0.48
NPAS3-205ENST00000547068 CKAP4Q07065 602 aaKnown RBP12.04□□□□□ -0.48
NPAS3-205ENST00000547068 KANK3Q6NY19 840 aa12.04□□□□□ -0.48
NPAS3-205ENST00000547068 CPLX2Q6PUV4 134 aaKnown RBP12.04□□□□□ -0.48
NPAS3-205ENST00000547068 PHKBQ93100 1093 aa12.04□□□□□ -0.48
NPAS3-205ENST00000547068 SEC31BQ9NQW1 1179 aa12.04□□□□□ -0.48
NPAS3-205ENST00000547068 GOLGA8KD6RF30 607 aa12.03□□□□□ -0.48
NPAS3-205ENST00000547068 NDUFAB1O14561 156 aa12.03□□□□□ -0.48
NPAS3-205ENST00000547068 ATP1A1P05023 1023 aaKnown RBP12.03□□□□□ -0.48
NPAS3-205ENST00000547068 FNTAP49354 379 aa12.03□□□□□ -0.48
NPAS3-205ENST00000547068 CDKAL1Q5VV42 579 aa12.03□□□□□ -0.48
NPAS3-205ENST00000547068 TICAM2Q86XR7 235 aa12.03□□□□□ -0.48
NPAS3-205ENST00000547068 ANKRD18AQ8IVF6 992 aa12.03□□□□□ -0.48
NPAS3-205ENST00000547068 OSBP2Q969R2 916 aa12.03□□□□□ -0.48
NPAS3-205ENST00000547068 ATXN2Q99700 1313 aaKnown RBP12.03□□□□□ -0.48
NPAS3-205ENST00000547068 HEG1Q9ULI3 1381 aa12.03□□□□□ -0.48
NPAS3-205ENST00000547068 FSBPO95073 299 aa12.03□□□□□ -0.48
NPAS3-205ENST00000547068 FGAP02671 866 aa12.03□□□□□ -0.48
NPAS3-205ENST00000547068 RXRAP19793 462 aa12.03□□□□□ -0.48
NPAS3-205ENST00000547068 CCT6AP40227 531 aaKnown RBP12.03□□□□□ -0.48
NPAS3-205ENST00000547068 NEDD9Q14511 834 aa12.03□□□□□ -0.48
NPAS3-205ENST00000547068 CAGE1Q8TC20 777 aa12.03□□□□□ -0.48
NPAS3-205ENST00000547068 SH3GL2Q99962 352 aa12.03□□□□□ -0.48
NPAS3-205ENST00000547068 C4AP0C0L4 1744 aa12.03□□□□□ -0.48
NPAS3-205ENST00000547068 C4BP0C0L5 1744 aa12.03□□□□□ -0.48
NPAS3-205ENST00000547068 C21orf2O43822 256 aa12.02□□□□□ -0.48
NPAS3-205ENST00000547068 TRIM37O94972 964 aa12.02□□□□□ -0.48
NPAS3-205ENST00000547068 MYL6BP14649 208 aa12.02□□□□□ -0.48
NPAS3-205ENST00000547068 PTPREP23469 700 aa12.02□□□□□ -0.48
NPAS3-205ENST00000547068 CDC25AP30304 524 aa12.02□□□□□ -0.48
NPAS3-205ENST00000547068 TIMM10P62072 90 aa12.02□□□□□ -0.48
NPAS3-205ENST00000547068 PDIA6Q15084 440 aa12.02□□□□□ -0.48
NPAS3-205ENST00000547068 AMOTL1Q8IY63 956 aa12.02□□□□□ -0.48
NPAS3-205ENST00000547068 SPATA20Q8TB22 786 aa12.02□□□□□ -0.48
NPAS3-205ENST00000547068 HAUS4Q9H6D7 363 aa12.02□□□□□ -0.48
NPAS3-205ENST00000547068 CD248Q9HCU0 757 aa12.02□□□□□ -0.48
NPAS3-205ENST00000547068 FAM184BQ9ULE4 1060 aa12.02□□□□□ -0.48
NPAS3-205ENST00000547068 SBF2Q86WG5 1849 aa12.02□□□□□ -0.49
NPAS3-205ENST00000547068 A6NNZ2 444 aa12.02□□□□□ -0.49
NPAS3-205ENST00000547068 RNF225M0QZC1 329 aaPredicted RBP12.02□□□□□ -0.49
NPAS3-205ENST00000547068 SEMA3EO15041 775 aa12.02□□□□□ -0.49
NPAS3-205ENST00000547068 N4BP3O15049 544 aa12.02□□□□□ -0.49
NPAS3-205ENST00000547068 CHUKO15111 745 aa12.02□□□□□ -0.49
NPAS3-205ENST00000547068 MEFVO15553 781 aaPredicted RBP12.02□□□□□ -0.49
NPAS3-205ENST00000547068 ACTN4O43707 911 aaKnown RBP12.02□□□□□ -0.49
NPAS3-205ENST00000547068 OPA1O60313 960 aa12.02□□□□□ -0.49
NPAS3-205ENST00000547068 NDUFA10O95299 355 aa12.02□□□□□ -0.49
NPAS3-205ENST00000547068 IFIT1P09914 478 aaKnown RBP12.02□□□□□ -0.49
NPAS3-205ENST00000547068 CD44P16070 742 aaKnown RBP12.02□□□□□ -0.49
NPAS3-205ENST00000547068 KRT9P35527 623 aa12.02□□□□□ -0.49
NPAS3-205ENST00000547068 TUBB8Q3ZCM7 444 aa12.02□□□□□ -0.49
NPAS3-205ENST00000547068 PAPD7Q5XG87 772 aaKnown RBP12.02□□□□□ -0.49
NPAS3-205ENST00000547068 SND1Q7KZF4 910 aaKnown RBP eCLIP12.02□□□□□ -0.49
NPAS3-205ENST00000547068 UBE3BQ7Z3V4 1068 aa12.02□□□□□ -0.49
NPAS3-205ENST00000547068 SPATS2Q86XZ4 545 aaKnown RBP12.02□□□□□ -0.49
NPAS3-205ENST00000547068 XAGE2Q96GT9 111 aa12.02□□□□□ -0.49
NPAS3-205ENST00000547068 METTL22Q9BUU2 404 aaPredicted RBP12.02□□□□□ -0.49
NPAS3-205ENST00000547068 FBXO2Q9UK22 296 aaPredicted RBP12.02□□□□□ -0.49
NPAS3-205ENST00000547068 EPN1Q9Y6I3 576 aaPredicted RBP12.02□□□□□ -0.49
NPAS3-205ENST00000547068 IARSP41252 1262 aaKnown RBP12.01□□□□□ -0.49
NPAS3-205ENST00000547068 SATB1Q01826 763 aa12.01□□□□□ -0.49
NPAS3-205ENST00000547068 CUL4BQ13620 913 aa12.01□□□□□ -0.49
NPAS3-205ENST00000547068 WASHC4Q2M389 1173 aa12.01□□□□□ -0.49
NPAS3-205ENST00000547068 RABL6Q3YEC7 729 aaPredicted RBP12.01□□□□□ -0.49
NPAS3-205ENST00000547068 CCDC70Q6NSX1 233 aa12.01□□□□□ -0.49
NPAS3-205ENST00000547068 NOSTRINQ8IVI9 506 aa12.01□□□□□ -0.49
NPAS3-205ENST00000547068 AENQ8WTP8 325 aaKnown RBP12.01□□□□□ -0.49
NPAS3-205ENST00000547068 ZKSCAN4Q969J2 545 aaPredicted RBP12.01□□□□□ -0.49
NPAS3-205ENST00000547068 JAKMIP2Q96AA8 810 aa12.01□□□□□ -0.49
NPAS3-205ENST00000547068 CHP1Q99653 195 aa12.01□□□□□ -0.49
NPAS3-205ENST00000547068 NHSQ6T4R5 1651 aa12.01□□□□□ -0.49
NPAS3-205ENST00000547068 PAPPAQ13219 1627 aa12.01□□□□□ -0.49
NPAS3-205ENST00000547068 ZNF213O14771 459 aa12.01□□□□□ -0.49
NPAS3-205ENST00000547068 SCP2P22307 547 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms