RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 CYP21A2P08686 494 aa19.86■□□□□ 0.77
LTBR-215ENST00000546296 VCAM1P19320 739 aa19.86■□□□□ 0.77
LTBR-215ENST00000546296 HOXA7P31268 230 aaPredicted RBP19.86■□□□□ 0.77
LTBR-215ENST00000546296 TRDNQ13061 729 aa19.86■□□□□ 0.77
LTBR-215ENST00000546296 ZNF296Q8WUU4 475 aaPredicted RBP19.86■□□□□ 0.77
LTBR-215ENST00000546296 LPAR1Q92633 364 aa19.86■□□□□ 0.77
LTBR-215ENST00000546296 RPAP3Q9H6T3 665 aaPredicted RBP19.86■□□□□ 0.77
LTBR-215ENST00000546296 CPA4Q9UI42 421 aa19.86■□□□□ 0.77
LTBR-215ENST00000546296 PLIN4Q96Q06 1357 aa19.85■□□□□ 0.77
LTBR-215ENST00000546296 B4E1Z4 1266 aa19.85■□□□□ 0.77
LTBR-215ENST00000546296 NMT2O60551 498 aa19.85■□□□□ 0.77
LTBR-215ENST00000546296 KDM4AO75164 1064 aa19.85■□□□□ 0.77
LTBR-215ENST00000546296 NT5C2P49902 561 aa19.85■□□□□ 0.77
LTBR-215ENST00000546296 NOM1Q5C9Z4 860 aaKnown RBP19.85■□□□□ 0.77
LTBR-215ENST00000546296 MKL1Q969V6 931 aa19.85■□□□□ 0.77
LTBR-215ENST00000546296 TANGO6Q9C0B7 1094 aa19.85■□□□□ 0.77
LTBR-215ENST00000546296 IL17RBQ9NRM6 502 aa19.85■□□□□ 0.77
LTBR-215ENST00000546296 F5H6K3 240 aa19.84■□□□□ 0.77
LTBR-215ENST00000546296 SP3Q02447 781 aa19.84■□□□□ 0.77
LTBR-215ENST00000546296 KLRC3Q07444 240 aa19.84■□□□□ 0.77
LTBR-215ENST00000546296 KIAA1755Q5JYT7 1200 aa19.84■□□□□ 0.77
LTBR-215ENST00000546296 CATSPERGQ6ZRH7 1159 aa19.84■□□□□ 0.77
LTBR-215ENST00000546296 LRRC47Q8N1G4 583 aaKnown RBP19.84■□□□□ 0.77
LTBR-215ENST00000546296 P2RX7Q99572 595 aaKnown RBP19.84■□□□□ 0.77
LTBR-215ENST00000546296 TCP11L1Q9NUJ3 509 aa19.84■□□□□ 0.77
LTBR-215ENST00000546296 C17orf99Q6UX52 265 aa19.83■□□□□ 0.77
LTBR-215ENST00000546296 RALYLQ86SE5 291 aaKnown RBP19.83■□□□□ 0.77
LTBR-215ENST00000546296 IQCA1Q86XH1 822 aa19.83■□□□□ 0.77
LTBR-215ENST00000546296 E7EWF7 191 aa19.82■□□□□ 0.76
LTBR-215ENST00000546296 SLC27A2O14975 620 aa19.82■□□□□ 0.76
LTBR-215ENST00000546296 WDR46O15213 610 aaKnown RBP19.82■□□□□ 0.76
LTBR-215ENST00000546296 REC8O95072 547 aa19.82■□□□□ 0.76
LTBR-215ENST00000546296 GCLCP48506 637 aaPredicted RBP19.82■□□□□ 0.76
LTBR-215ENST00000546296 KIF22Q14807 665 aa19.82■□□□□ 0.76
LTBR-215ENST00000546296 CCDC178Q5BJE1 867 aa19.82■□□□□ 0.76
LTBR-215ENST00000546296 RNF20Q5VTR2 975 aa19.82■□□□□ 0.76
LTBR-215ENST00000546296 CREB3L3Q68CJ9 461 aa19.82■□□□□ 0.76
LTBR-215ENST00000546296 ERO1AQ96HE7 468 aa19.82■□□□□ 0.76
LTBR-215ENST00000546296 ZKSCAN3Q9BRR0 538 aa19.82■□□□□ 0.76
LTBR-215ENST00000546296 ZSWIM5Q9P217 1185 aa19.82■□□□□ 0.76
LTBR-215ENST00000546296 SYNPO2Q9UMS6 1093 aa19.82■□□□□ 0.76
LTBR-215ENST00000546296 GTF3C3Q9Y5Q9 886 aa19.82■□□□□ 0.76
LTBR-215ENST00000546296 NDUFB10O96000 172 aa19.81■□□□□ 0.76
LTBR-215ENST00000546296 HERVK_113P62684 666 aa19.81■□□□□ 0.76
LTBR-215ENST00000546296 COG2Q14746 738 aa19.81■□□□□ 0.76
LTBR-215ENST00000546296 NECTIN1Q15223 517 aa19.81■□□□□ 0.76
LTBR-215ENST00000546296 SLFN13Q68D06 897 aa19.81■□□□□ 0.76
LTBR-215ENST00000546296 SAMD1Q6SPF0 538 aaPredicted RBP19.81■□□□□ 0.76
LTBR-215ENST00000546296 ANKRD13CQ8N6S4 541 aa19.81■□□□□ 0.76
LTBR-215ENST00000546296 NCOA7Q8NI08 942 aa19.81■□□□□ 0.76
LTBR-215ENST00000546296 NKX2-3Q8TAU0 364 aa19.81■□□□□ 0.76
LTBR-215ENST00000546296 TTC14Q96N46 770 aa19.81■□□□□ 0.76
LTBR-215ENST00000546296 UBAC1Q9BSL1 405 aa19.81■□□□□ 0.76
LTBR-215ENST00000546296 ISY1Q9ULR0 285 aaKnown RBP19.81■□□□□ 0.76
LTBR-215ENST00000546296 TAF6LQ9Y6J9 622 aa19.81■□□□□ 0.76
LTBR-215ENST00000546296 PTPRFP10586 1907 aa19.8■□□□□ 0.76
LTBR-215ENST00000546296 LOC285556D6RIA3 1793 aa19.8■□□□□ 0.76
LTBR-215ENST00000546296 ADGRA2Q96PE1 1338 aa19.8■□□□□ 0.76
LTBR-215ENST00000546296 TOP1P11387 765 aaKnown RBP19.8■□□□□ 0.76
LTBR-215ENST00000546296 ARHGEF6Q15052 776 aa19.8■□□□□ 0.76
LTBR-215ENST00000546296 FAM83BQ5T0W9 1011 aa19.8■□□□□ 0.76
LTBR-215ENST00000546296 GMCL1P1Q8NEA9 526 aa19.8■□□□□ 0.76
LTBR-215ENST00000546296 CD99L2Q8TCZ2 262 aa19.8■□□□□ 0.76
LTBR-215ENST00000546296 GTF3C2Q8WUA4 911 aaPredicted RBP19.8■□□□□ 0.76
LTBR-215ENST00000546296 CHMP4CQ96CF2 233 aa19.8■□□□□ 0.76
LTBR-215ENST00000546296 ZSCAN10Q96SZ4 725 aaPredicted RBP19.8■□□□□ 0.76
LTBR-215ENST00000546296 NUP88Q99567 741 aaPredicted RBP19.8■□□□□ 0.76
LTBR-215ENST00000546296 HOXC10Q9NYD6 342 aa19.8■□□□□ 0.76
LTBR-215ENST00000546296 MTMR7Q9Y216 660 aa19.8■□□□□ 0.76
LTBR-215ENST00000546296 FLOT1O75955 427 aa19.79■□□□□ 0.76
LTBR-215ENST00000546296 ECM2O94769 699 aaPredicted RBP19.79■□□□□ 0.76
LTBR-215ENST00000546296 BCRP11274 1271 aa19.79■□□□□ 0.76
LTBR-215ENST00000546296 TMEM47Q9BQJ4 181 aa19.79■□□□□ 0.76
LTBR-215ENST00000546296 ZKSCAN1P17029 563 aaPredicted RBP19.78■□□□□ 0.76
LTBR-215ENST00000546296 NOVP48745 357 aa19.78■□□□□ 0.76
LTBR-215ENST00000546296 COL13A1Q5TAT6 717 aaPredicted RBP19.78■□□□□ 0.76
LTBR-215ENST00000546296 STOX1Q6ZVD7 989 aa19.78■□□□□ 0.76
LTBR-215ENST00000546296 CYB5R4Q7L1T6 521 aa19.78■□□□□ 0.76
LTBR-215ENST00000546296 DGKHQ86XP1 1220 aa19.78■□□□□ 0.76
LTBR-215ENST00000546296 GPRC5AQ8NFJ5 357 aa19.78■□□□□ 0.76
LTBR-215ENST00000546296 PAGR1Q9BTK6 254 aa19.78■□□□□ 0.76
LTBR-215ENST00000546296 GREB1LQ9C091 1923 aaPredicted RBP19.78■□□□□ 0.76
LTBR-215ENST00000546296 LAMA4Q16363 1823 aa19.77■□□□□ 0.76
LTBR-215ENST00000546296 FMNL1O95466 1100 aaPredicted RBP19.77■□□□□ 0.76
LTBR-215ENST00000546296 BMP3P12645 472 aa19.77■□□□□ 0.76
LTBR-215ENST00000546296 MCCP23508 829 aa19.77■□□□□ 0.76
LTBR-215ENST00000546296 SLC1A4P43007 532 aa19.77■□□□□ 0.76
LTBR-215ENST00000546296 LACTBP83111 547 aaPredicted RBP19.77■□□□□ 0.76
LTBR-215ENST00000546296 FAM110CQ1W6H9 321 aa19.77■□□□□ 0.76
LTBR-215ENST00000546296 CTU1Q7Z7A3 348 aaKnown RBP19.77■□□□□ 0.76
LTBR-215ENST00000546296 KAT14Q9H8E8 782 aa19.77■□□□□ 0.76
LTBR-215ENST00000546296 TNKSO95271 1327 aa19.76■□□□□ 0.75
LTBR-215ENST00000546296 ERICH2A1L162 156 aa19.76■□□□□ 0.75
LTBR-215ENST00000546296 DSG3P32926 999 aa19.76■□□□□ 0.75
LTBR-215ENST00000546296 PSMC4P43686 418 aa19.76■□□□□ 0.75
LTBR-215ENST00000546296 SART3Q15020 963 aaKnown RBP19.76■□□□□ 0.75
LTBR-215ENST00000546296 RCSD1Q6JBY9 416 aa19.76■□□□□ 0.75
LTBR-215ENST00000546296 CCAR1Q8IX12 1150 aaKnown RBP19.76■□□□□ 0.75
LTBR-215ENST00000546296 GMCL1Q96IK5 515 aa19.76■□□□□ 0.75
LTBR-215ENST00000546296 EFCC1Q9HA90 598 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms