RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 GDF11O95390 407 aa22.52■■□□□ 1.2
SKP2-208ENST00000546211 PARP1P09874 1014 aaKnown RBP22.52■■□□□ 1.2
SKP2-208ENST00000546211 XBP1P17861 261 aa22.52■■□□□ 1.2
SKP2-208ENST00000546211 GUCY1A2P33402 732 aa22.52■■□□□ 1.2
SKP2-208ENST00000546211 KRT85P78386 507 aa22.52■■□□□ 1.2
SKP2-208ENST00000546211 ATP2B2Q01814 1243 aa22.52■■□□□ 1.2
SKP2-208ENST00000546211 GPR162Q16538 588 aa22.52■■□□□ 1.2
SKP2-208ENST00000546211 CSPP1Q1MSJ5 1256 aa22.52■■□□□ 1.2
SKP2-208ENST00000546211 CLEC10AQ8IUN9 316 aa22.52■■□□□ 1.2
SKP2-208ENST00000546211 CNPY2Q9Y2B0 182 aa22.52■■□□□ 1.2
SKP2-208ENST00000546211 V9GY48 417 aaPredicted RBP22.52■■□□□ 1.2
SKP2-208ENST00000546211 PALM3A6NDB9 673 aaPredicted RBP22.51■■□□□ 1.19
SKP2-208ENST00000546211 SKOR2Q2VWA4 1001 aaPredicted RBP22.51■■□□□ 1.19
SKP2-208ENST00000546211 LRRC47Q8N1G4 583 aaKnown RBP22.51■■□□□ 1.19
SKP2-208ENST00000546211 STAG2Q8N3U4 1231 aa22.51■■□□□ 1.19
SKP2-208ENST00000546211 GJB4Q9NTQ9 266 aa22.51■■□□□ 1.19
SKP2-208ENST00000546211 LMBRD1Q9NUN5 540 aa22.51■■□□□ 1.19
SKP2-208ENST00000546211 NYAP2Q9P242 653 aa22.51■■□□□ 1.19
SKP2-208ENST00000546211 PGAP2Q9UHJ9 254 aa22.51■■□□□ 1.19
SKP2-208ENST00000546211 UBE2Q2LH0YL09 131 aa22.5■■□□□ 1.19
SKP2-208ENST00000546211 TRAK2O60296 914 aa22.5■■□□□ 1.19
SKP2-208ENST00000546211 DDNO94850 711 aaPredicted RBP22.5■■□□□ 1.19
SKP2-208ENST00000546211 GH2P01242 217 aa22.5■■□□□ 1.19
SKP2-208ENST00000546211 LMOD1P29536 600 aaPredicted RBP22.5■■□□□ 1.19
SKP2-208ENST00000546211 ICA1Q05084 483 aa22.5■■□□□ 1.19
SKP2-208ENST00000546211 SEPT2Q15019 361 aa22.5■■□□□ 1.19
SKP2-208ENST00000546211 FAM173BQ6P4H8 233 aa22.5■■□□□ 1.19
SKP2-208ENST00000546211 APOBEC3FQ8IUX4 373 aaKnown RBP22.5■■□□□ 1.19
SKP2-208ENST00000546211 ASTN2O75129 1339 aaPredicted RBP22.49■■□□□ 1.19
SKP2-208ENST00000546211 KLRF2D3W0D1 207 aa22.49■■□□□ 1.19
SKP2-208ENST00000546211 PDHBP11177 359 aa22.49■■□□□ 1.19
SKP2-208ENST00000546211 EEF2P13639 858 aaKnown RBP22.49■■□□□ 1.19
SKP2-208ENST00000546211 KIF23Q02241 960 aaPredicted RBP22.49■■□□□ 1.19
SKP2-208ENST00000546211 GNL2Q13823 731 aaKnown RBP22.49■■□□□ 1.19
SKP2-208ENST00000546211 SAFBQ15424 915 aaKnown RBP eCLIP22.49■■□□□ 1.19
SKP2-208ENST00000546211 PKN1Q16512 942 aa22.49■■□□□ 1.19
SKP2-208ENST00000546211 ASPRV1Q53RT3 343 aa22.49■■□□□ 1.19
SKP2-208ENST00000546211 BRAPQ7Z569 592 aa22.49■■□□□ 1.19
SKP2-208ENST00000546211 CDAN1Q8IWY9 1227 aa22.49■■□□□ 1.19
SKP2-208ENST00000546211 TMEM87AQ8NBN3 555 aa22.49■■□□□ 1.19
SKP2-208ENST00000546211 TRPM4Q8TD43 1214 aa22.49■■□□□ 1.19
SKP2-208ENST00000546211 MKL1Q969V6 931 aa22.49■■□□□ 1.19
SKP2-208ENST00000546211 GDPD2Q9HCC8 539 aa22.49■■□□□ 1.19
SKP2-208ENST00000546211 USP17L5A8MUK1 530 aa22.48■■□□□ 1.19
SKP2-208ENST00000546211 FIBPO43427 364 aa22.48■■□□□ 1.19
SKP2-208ENST00000546211 GOLGA8HP0CJ92 632 aa22.48■■□□□ 1.19
SKP2-208ENST00000546211 EPS15P42566 896 aa22.48■■□□□ 1.19
SKP2-208ENST00000546211 USP17L2Q6R6M4 530 aa22.48■■□□□ 1.19
SKP2-208ENST00000546211 MIGA2Q7L4E1 593 aa22.48■■□□□ 1.19
SKP2-208ENST00000546211 USP48Q86UV5 1035 aa22.48■■□□□ 1.19
SKP2-208ENST00000546211 hCG_1642624A0A1W2PR95 340 aa22.47■■□□□ 1.19
SKP2-208ENST00000546211 GRIN3BO60391 1043 aa22.47■■□□□ 1.19
SKP2-208ENST00000546211 MAP3K10Q02779 954 aa22.47■■□□□ 1.19
SKP2-208ENST00000546211 RRP1BQ14684 758 aaKnown RBP22.47■■□□□ 1.19
SKP2-208ENST00000546211 SHROOM1Q2M3G4 852 aaPredicted RBP22.47■■□□□ 1.19
SKP2-208ENST00000546211 ANGEL2Q5VTE6 544 aaKnown RBP22.47■■□□□ 1.19
SKP2-208ENST00000546211 TEPSINQ96N21 525 aa22.47■■□□□ 1.19
SKP2-208ENST00000546211 ZNF396Q96N95 335 aaPredicted RBP22.47■■□□□ 1.19
SKP2-208ENST00000546211 SPZ1Q9BXG8 430 aa22.47■■□□□ 1.19
SKP2-208ENST00000546211 SCAND2PQ9GZW5 306 aaPredicted RBP22.47■■□□□ 1.19
SKP2-208ENST00000546211 DEFB129Q9H1M3 183 aa22.47■■□□□ 1.19
SKP2-208ENST00000546211 CFAP45Q9UL16 551 aa22.47■■□□□ 1.19
SKP2-208ENST00000546211 SCAF8Q9UPN6 1271 aaKnown RBP22.47■■□□□ 1.19
SKP2-208ENST00000546211 MMP1P03956 469 aa22.46■■□□□ 1.19
SKP2-208ENST00000546211 SNHG28P0DPA3 235 aa22.46■■□□□ 1.19
SKP2-208ENST00000546211 SCG2P13521 617 aa22.46■■□□□ 1.19
SKP2-208ENST00000546211 SMARCA1P28370 1054 aa22.46■■□□□ 1.19
SKP2-208ENST00000546211 PFKFB3Q16875 520 aaPredicted RBP22.46■■□□□ 1.19
SKP2-208ENST00000546211 ATL3Q6DD88 541 aa22.46■■□□□ 1.19
SKP2-208ENST00000546211 DPY19L2Q6NUT2 758 aa22.46■■□□□ 1.19
SKP2-208ENST00000546211 RASGRP2Q7LDG7 609 aa22.46■■□□□ 1.19
SKP2-208ENST00000546211 DDX49Q9Y6V7 483 aaKnown RBP22.46■■□□□ 1.19
SKP2-208ENST00000546211 PIBF1Q8WXW3 757 aa22.46■■□□□ 1.19
SKP2-208ENST00000546211 MYH6P13533 1939 aa22.46■■□□□ 1.19
SKP2-208ENST00000546211 JAG1P78504 1218 aa22.45■■□□□ 1.18
SKP2-208ENST00000546211 GPATCH4Q5T3I0 446 aaKnown RBP22.45■■□□□ 1.18
SKP2-208ENST00000546211 HOOK2Q96ED9 719 aa22.45■■□□□ 1.18
SKP2-208ENST00000546211 ADARB2Q9NS39 739 aaKnown RBP22.45■■□□□ 1.18
SKP2-208ENST00000546211 VPS54Q9P1Q0 977 aa22.45■■□□□ 1.18
SKP2-208ENST00000546211 TFIP11Q9UBB9 837 aaKnown RBP22.45■■□□□ 1.18
SKP2-208ENST00000546211 ZBTB21Q9ULJ3 1066 aa22.45■■□□□ 1.18
SKP2-208ENST00000546211 KCNJ14Q9UNX9 436 aa22.45■■□□□ 1.18
SKP2-208ENST00000546211 MYH4Q9Y623 1939 aa22.44■■□□□ 1.18
SKP2-208ENST00000546211 FRMPD2Q68DX3 1309 aaPredicted RBP22.44■■□□□ 1.18
SKP2-208ENST00000546211 KIF28PB7ZC32 967 aa22.44■■□□□ 1.18
SKP2-208ENST00000546211 CAP2P40123 477 aa22.44■■□□□ 1.18
SKP2-208ENST00000546211 ZNF543Q08ER8 600 aa22.44■■□□□ 1.18
SKP2-208ENST00000546211 ARHGEF10LQ9HCE6 1279 aa22.44■■□□□ 1.18
SKP2-208ENST00000546211 GGA3Q9NZ52 723 aa22.44■■□□□ 1.18
SKP2-208ENST00000546211 SYNPO2Q9UMS6 1093 aa22.44■■□□□ 1.18
SKP2-208ENST00000546211 CYTH3O43739 400 aa22.43■■□□□ 1.18
SKP2-208ENST00000546211 RAD21O60216 631 aa22.43■■□□□ 1.18
SKP2-208ENST00000546211 U2AF2P26368 475 aaKnown RBP eCLIP22.43■■□□□ 1.18
SKP2-208ENST00000546211 CCDC96Q2M329 555 aa22.43■■□□□ 1.18
SKP2-208ENST00000546211 KLHL40Q2TBA0 621 aa22.43■■□□□ 1.18
SKP2-208ENST00000546211 SIAH1Q8IUQ4 282 aa22.43■■□□□ 1.18
SKP2-208ENST00000546211 DIS3L2Q8IYB7 885 aaKnown RBP22.43■■□□□ 1.18
SKP2-208ENST00000546211 DCAF4Q8WV16 495 aa22.43■■□□□ 1.18
SKP2-208ENST00000546211 RRP36Q96EU6 259 aaKnown RBP22.43■■□□□ 1.18
SKP2-208ENST00000546211 SPATA32Q96LK8 384 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms