RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 RNF41Q9H4P4 317 aaPredicted RBP14.03□□□□□ -0.16
LTBR-214ENST00000545445 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.03□□□□□ -0.16
LTBR-214ENST00000545445 ZHX2Q9Y6X8 837 aa14.03□□□□□ -0.16
LTBR-214ENST00000545445 ROBO3Q96MS0 1386 aa14.03□□□□□ -0.16
LTBR-214ENST00000545445 NAV1Q8NEY1 1877 aa14.03□□□□□ -0.16
LTBR-214ENST00000545445 MGAMO43451 1857 aa14.02□□□□□ -0.16
LTBR-214ENST00000545445 DDX60LQ5H9U9 1706 aaKnown RBP14.02□□□□□ -0.16
LTBR-214ENST00000545445 CYP2D6P10635 497 aa14.02□□□□□ -0.17
LTBR-214ENST00000545445 MCCP23508 829 aa14.02□□□□□ -0.17
LTBR-214ENST00000545445 NECTIN1Q15223 517 aa14.02□□□□□ -0.17
LTBR-214ENST00000545445 LRIT3Q3SXY7 679 aa14.02□□□□□ -0.17
LTBR-214ENST00000545445 C16orf86Q6ZW13 317 aa14.02□□□□□ -0.17
LTBR-214ENST00000545445 FASTKD5Q7L8L6 764 aaKnown RBP14.02□□□□□ -0.17
LTBR-214ENST00000545445 USP26Q9BXU7 913 aa14.02□□□□□ -0.17
LTBR-214ENST00000545445 MYH1P12882 1939 aa14.02□□□□□ -0.17
LTBR-214ENST00000545445 CYP2D7A0A087X1C5 515 aa14.01□□□□□ -0.17
LTBR-214ENST00000545445 ZKSCAN1P17029 563 aaPredicted RBP14.01□□□□□ -0.17
LTBR-214ENST00000545445 AKNAD1Q5T1N1 836 aa14.01□□□□□ -0.17
LTBR-214ENST00000545445 SCYL3Q8IZE3 742 aa14.01□□□□□ -0.17
LTBR-214ENST00000545445 TDHQ8IZJ6 230 aa14.01□□□□□ -0.17
LTBR-214ENST00000545445 ANKRD13CQ8N6S4 541 aa14.01□□□□□ -0.17
LTBR-214ENST00000545445 STAG1Q8WVM7 1258 aa14.01□□□□□ -0.17
LTBR-214ENST00000545445 CCDC17Q96LX7 622 aa14.01□□□□□ -0.17
LTBR-214ENST00000545445 UPF2Q9HAU5 1272 aaKnown RBP14.01□□□□□ -0.17
LTBR-214ENST00000545445 MKNK2Q9HBH9 465 aa14.01□□□□□ -0.17
LTBR-214ENST00000545445 PICK1Q9NRD5 415 aa14.01□□□□□ -0.17
LTBR-214ENST00000545445 GINM1Q9NU53 330 aa14.01□□□□□ -0.17
LTBR-214ENST00000545445 PHF20L1A8MW92 1017 aa14□□□□□ -0.17
LTBR-214ENST00000545445 CYP21A2P08686 494 aa14□□□□□ -0.17
LTBR-214ENST00000545445 FGRP09769 529 aa14□□□□□ -0.17
LTBR-214ENST00000545445 CAPN2P17655 700 aa14□□□□□ -0.17
LTBR-214ENST00000545445 PTPRAP18433 802 aa14□□□□□ -0.17
LTBR-214ENST00000545445 HSPA4P34932 840 aa14□□□□□ -0.17
LTBR-214ENST00000545445 CDK8P49336 464 aa14□□□□□ -0.17
LTBR-214ENST00000545445 TRIM32Q13049 653 aa14□□□□□ -0.17
LTBR-214ENST00000545445 TSGA10IPQ3SY00 556 aa14□□□□□ -0.17
LTBR-214ENST00000545445 CREB3L3Q68CJ9 461 aa14□□□□□ -0.17
LTBR-214ENST00000545445 TATDN1Q6P1N9 297 aa14□□□□□ -0.17
LTBR-214ENST00000545445 MFSD6Q6ZSS7 791 aa14□□□□□ -0.17
LTBR-214ENST00000545445 PHF6Q8IWS0 365 aaKnown RBP eCLIP14□□□□□ -0.17
LTBR-214ENST00000545445 COA7Q96BR5 231 aa14□□□□□ -0.17
LTBR-214ENST00000545445 BACH2Q9BYV9 841 aa14□□□□□ -0.17
LTBR-214ENST00000545445 CNNM2Q9H8M5 875 aa14□□□□□ -0.17
LTBR-214ENST00000545445 FRMD4AQ9P2Q2 1039 aaPredicted RBP14□□□□□ -0.17
LTBR-214ENST00000545445 BAZ2AQ9UIF9 1905 aaKnown RBP14□□□□□ -0.17
LTBR-214ENST00000545445 TRIM75PA6NK02 468 aa13.99□□□□□ -0.17
LTBR-214ENST00000545445 SLC27A2O14975 620 aa13.99□□□□□ -0.17
LTBR-214ENST00000545445 ORC4O43929 436 aa13.99□□□□□ -0.17
LTBR-214ENST00000545445 CTNND1O60716 968 aaKnown RBP13.99□□□□□ -0.17
LTBR-214ENST00000545445 HMGCRP04035 888 aa13.99□□□□□ -0.17
LTBR-214ENST00000545445 SLURP2P0DP57 97 aa13.99□□□□□ -0.17
LTBR-214ENST00000545445 SHMT1P34896 483 aa13.99□□□□□ -0.17
LTBR-214ENST00000545445 HAND2P61296 217 aa13.99□□□□□ -0.17
LTBR-214ENST00000545445 CTDSPL2Q05D32 466 aa13.99□□□□□ -0.17
LTBR-214ENST00000545445 TRDNQ13061 729 aa13.99□□□□□ -0.17
LTBR-214ENST00000545445 KRT32Q14532 448 aa13.99□□□□□ -0.17
LTBR-214ENST00000545445 CERKLQ49MI3 558 aaPredicted RBP13.99□□□□□ -0.17
LTBR-214ENST00000545445 CCDC84Q86UT8 332 aaPredicted RBP13.99□□□□□ -0.17
LTBR-214ENST00000545445 ZNF444Q8N0Y2 327 aaPredicted RBP13.99□□□□□ -0.17
LTBR-214ENST00000545445 ANKLE1Q8NAG6 615 aa13.99□□□□□ -0.17
LTBR-214ENST00000545445 KCNB2Q92953 911 aa13.99□□□□□ -0.17
LTBR-214ENST00000545445 DYNLL2Q96FJ2 89 aa13.99□□□□□ -0.17
LTBR-214ENST00000545445 UBE2OQ9C0C9 1292 aaKnown RBP13.99□□□□□ -0.17
LTBR-214ENST00000545445 NBPF3Q9H094 633 aa13.99□□□□□ -0.17
LTBR-214ENST00000545445 C11orf49Q9H6J7 331 aa13.99□□□□□ -0.17
LTBR-214ENST00000545445 DNAJC18Q9H819 358 aa13.99□□□□□ -0.17
LTBR-214ENST00000545445 SLC45A1Q9Y2W3 748 aa13.99□□□□□ -0.17
LTBR-214ENST00000545445 AFG3L2Q9Y4W6 797 aa13.99□□□□□ -0.17
LTBR-214ENST00000545445 VCANP13611 3396 aa13.98□□□□□ -0.17
LTBR-214ENST00000545445 TREML2Q5T2D2 321 aa13.98□□□□□ -0.17
LTBR-214ENST00000545445 KRT23Q9C075 422 aa13.98□□□□□ -0.17
LTBR-214ENST00000545445 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.98□□□□□ -0.17
LTBR-214ENST00000545445 RPTORQ8N122 1335 aa13.97□□□□□ -0.17
LTBR-214ENST00000545445 SEC24BO95487 1268 aa13.97□□□□□ -0.17
LTBR-214ENST00000545445 ASNSP08243 561 aa13.97□□□□□ -0.17
LTBR-214ENST00000545445 CAP2P40123 477 aa13.97□□□□□ -0.17
LTBR-214ENST00000545445 ANAPC15P60006 121 aa13.97□□□□□ -0.17
LTBR-214ENST00000545445 EVX2Q03828 476 aa13.97□□□□□ -0.17
LTBR-214ENST00000545445 PPP4R3BQ5MIZ7 849 aa13.97□□□□□ -0.17
LTBR-214ENST00000545445 TBC1D10CQ8IV04 446 aa13.97□□□□□ -0.17
LTBR-214ENST00000545445 SLC44A5Q8NCS7 719 aa13.97□□□□□ -0.17
LTBR-214ENST00000545445 ESR2Q92731 530 aa13.97□□□□□ -0.17
LTBR-214ENST00000545445 CABP5Q9NP86 173 aa13.97□□□□□ -0.17
LTBR-214ENST00000545445 AGTPBP1Q9UPW5 1226 aa13.97□□□□□ -0.17
LTBR-214ENST00000545445 SPTBN5Q9NRC6 3674 aaKnown RBP13.96□□□□□ -0.17
LTBR-214ENST00000545445 PFASO15067 1338 aa13.96□□□□□ -0.17
LTBR-214ENST00000545445 FAM196BA6NMK8 535 aa13.96□□□□□ -0.17
LTBR-214ENST00000545445 E7EWF7 191 aa13.96□□□□□ -0.17
LTBR-214ENST00000545445 SMIM22K7EJ46 135 aa13.96□□□□□ -0.17
LTBR-214ENST00000545445 HMGB1P09429 215 aaKnown RBP13.96□□□□□ -0.17
LTBR-214ENST00000545445 RASA1P20936 1047 aa13.96□□□□□ -0.17
LTBR-214ENST00000545445 FAM110CQ1W6H9 321 aa13.96□□□□□ -0.17
LTBR-214ENST00000545445 ABCB5Q2M3G0 1257 aa13.96□□□□□ -0.17
LTBR-214ENST00000545445 TMEM179Q6ZVK1 233 aa13.96□□□□□ -0.17
LTBR-214ENST00000545445 RALYLQ86SE5 291 aaKnown RBP13.96□□□□□ -0.17
LTBR-214ENST00000545445 NCOA7Q8NI08 942 aa13.96□□□□□ -0.17
LTBR-214ENST00000545445 GUCD1Q96NT3 240 aa13.96□□□□□ -0.17
LTBR-214ENST00000545445 TBC1D2Q9BYX2 928 aa13.96□□□□□ -0.17
LTBR-214ENST00000545445 HMX1Q9NP08 348 aaPredicted RBP13.96□□□□□ -0.17
LTBR-214ENST00000545445 TOMM22Q9NS69 142 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms