RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 USP17L19D6RCP7 530 aa14.96□□□□□ -0.01
ACTN1-206ENST00000544964 USP17L20D6RJB6 530 aa14.96□□□□□ -0.01
ACTN1-206ENST00000544964 CHGBP05060 677 aa14.96□□□□□ -0.01
ACTN1-206ENST00000544964 GSPT1P15170 499 aaKnown RBP14.96□□□□□ -0.01
ACTN1-206ENST00000544964 ZKSCAN1P17029 563 aaPredicted RBP14.96□□□□□ -0.01
ACTN1-206ENST00000544964 USP17L24Q0WX57 530 aa14.96□□□□□ -0.01
ACTN1-206ENST00000544964 SLFNL1Q499Z3 407 aa14.96□□□□□ -0.01
ACTN1-206ENST00000544964 LBX2Q6XYB7 198 aa14.96□□□□□ -0.01
ACTN1-206ENST00000544964 CATSPERGQ6ZRH7 1159 aa14.96□□□□□ -0.01
ACTN1-206ENST00000544964 NECAB2Q7Z6G3 386 aa14.96□□□□□ -0.01
ACTN1-206ENST00000544964 PLEKHH3Q7Z736 793 aa14.96□□□□□ -0.01
ACTN1-206ENST00000544964 KBTBD3Q8NAB2 608 aa14.96□□□□□ -0.01
ACTN1-206ENST00000544964 SDR42E1Q8WUS8 393 aa14.96□□□□□ -0.01
ACTN1-206ENST00000544964 RILPL2Q969X0 211 aa14.96□□□□□ -0.01
ACTN1-206ENST00000544964 APBA2Q99767 749 aa14.96□□□□□ -0.01
ACTN1-206ENST00000544964 CRNKL1Q9BZJ0 848 aaKnown RBP14.96□□□□□ -0.01
ACTN1-206ENST00000544964 DCP1AQ9NPI6 582 aaPredicted RBP14.96□□□□□ -0.01
ACTN1-206ENST00000544964 PFASO15067 1338 aa14.95□□□□□ -0.02
ACTN1-206ENST00000544964 COL6A3P12111 3177 aa14.95□□□□□ -0.02
ACTN1-206ENST00000544964 SPDYE16A6NNV3 312 aaPredicted RBP14.95□□□□□ -0.02
ACTN1-206ENST00000544964 CYP2D6P10635 497 aa14.95□□□□□ -0.02
ACTN1-206ENST00000544964 USP14P54578 494 aa14.95□□□□□ -0.02
ACTN1-206ENST00000544964 CACNB2Q08289 660 aaPredicted RBP14.95□□□□□ -0.02
ACTN1-206ENST00000544964 SEPT2Q15019 361 aa14.95□□□□□ -0.02
ACTN1-206ENST00000544964 SLC44A5Q8NCS7 719 aa14.95□□□□□ -0.02
ACTN1-206ENST00000544964 EVI5LQ96CN4 794 aa14.95□□□□□ -0.02
ACTN1-206ENST00000544964 FSD1Q9BTV5 496 aa14.95□□□□□ -0.02
ACTN1-206ENST00000544964 MCM9Q9NXL9 1143 aa14.95□□□□□ -0.02
ACTN1-206ENST00000544964 BTBD7Q9P203 1132 aa14.95□□□□□ -0.02
ACTN1-206ENST00000544964 RABGAP1Q9Y3P9 1069 aa14.95□□□□□ -0.02
ACTN1-206ENST00000544964 GREB1LQ9C091 1923 aaPredicted RBP14.95□□□□□ -0.02
ACTN1-206ENST00000544964 COL11A1P12107 1806 aaPredicted RBP14.94□□□□□ -0.02
ACTN1-206ENST00000544964 A0A1W2PRG0 241 aa14.94□□□□□ -0.02
ACTN1-206ENST00000544964 POLR3DP05423 398 aaPredicted RBP14.94□□□□□ -0.02
ACTN1-206ENST00000544964 CCND3P30281 292 aaPredicted RBP14.94□□□□□ -0.02
ACTN1-206ENST00000544964 RGS2P41220 211 aa14.94□□□□□ -0.02
ACTN1-206ENST00000544964 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.94□□□□□ -0.02
ACTN1-206ENST00000544964 SMIM22K7EJ46 135 aa14.93□□□□□ -0.02
ACTN1-206ENST00000544964 ADD2P35612 726 aa14.93□□□□□ -0.02
ACTN1-206ENST00000544964 MAP2K5Q13163 448 aa14.93□□□□□ -0.02
ACTN1-206ENST00000544964 KIAA1755Q5JYT7 1200 aa14.93□□□□□ -0.02
ACTN1-206ENST00000544964 LHX8Q68G74 356 aa14.93□□□□□ -0.02
ACTN1-206ENST00000544964 CLEC10AQ8IUN9 316 aa14.93□□□□□ -0.02
ACTN1-206ENST00000544964 TRMT44Q8IYL2 757 aaKnown RBP14.93□□□□□ -0.02
ACTN1-206ENST00000544964 C7orf61Q8IZ16 206 aa14.93□□□□□ -0.02
ACTN1-206ENST00000544964 NBPF3Q9H094 633 aa14.93□□□□□ -0.02
ACTN1-206ENST00000544964 C11orf49Q9H6J7 331 aa14.93□□□□□ -0.02
ACTN1-206ENST00000544964 RPAP3Q9H6T3 665 aaPredicted RBP14.93□□□□□ -0.02
ACTN1-206ENST00000544964 ARMT1Q9H993 441 aa14.93□□□□□ -0.02
ACTN1-206ENST00000544964 CABP5Q9NP86 173 aa14.93□□□□□ -0.02
ACTN1-206ENST00000544964 FLRT1Q9NZU1 646 aa14.93□□□□□ -0.02
ACTN1-206ENST00000544964 A0A1W2PPC1 479 aa14.92□□□□□ -0.02
ACTN1-206ENST00000544964 SOX1O00570 391 aaPredicted RBP14.92□□□□□ -0.02
ACTN1-206ENST00000544964 RNF113AO15541 343 aaKnown RBP14.92□□□□□ -0.02
ACTN1-206ENST00000544964 PRKAB2O43741 272 aa14.92□□□□□ -0.02
ACTN1-206ENST00000544964 MBD4O95243 580 aa14.92□□□□□ -0.02
ACTN1-206ENST00000544964 IGHA2P01877 340 aa14.92□□□□□ -0.02
ACTN1-206ENST00000544964 COL6A1P12109 1028 aa14.92□□□□□ -0.02
ACTN1-206ENST00000544964 SDSP20132 328 aa14.92□□□□□ -0.02
ACTN1-206ENST00000544964 CCNA1P78396 465 aa14.92□□□□□ -0.02
ACTN1-206ENST00000544964 GRB14Q14449 540 aa14.92□□□□□ -0.02
ACTN1-206ENST00000544964 ZSCAN25Q6NSZ9 544 aa14.92□□□□□ -0.02
ACTN1-206ENST00000544964 CCAR1Q8IX12 1150 aaKnown RBP14.92□□□□□ -0.02
ACTN1-206ENST00000544964 DYNLL2Q96FJ2 89 aa14.92□□□□□ -0.02
ACTN1-206ENST00000544964 GDF15Q99988 308 aa14.92□□□□□ -0.02
ACTN1-206ENST00000544964 HOXC6P09630 235 aa14.91□□□□□ -0.02
ACTN1-206ENST00000544964 PTPREP23469 700 aa14.91□□□□□ -0.02
ACTN1-206ENST00000544964 UBE3CQ15386 1083 aa14.91□□□□□ -0.02
ACTN1-206ENST00000544964 ZMYND8Q9ULU4 1186 aaPredicted RBP14.91□□□□□ -0.02
ACTN1-206ENST00000544964 LAMA2P24043 3122 aaKnown RBP14.9□□□□□ -0.02
ACTN1-206ENST00000544964 CYP2D7A0A087X1C5 515 aa14.9□□□□□ -0.02
ACTN1-206ENST00000544964 SLC15A5A6NIM6 579 aa14.9□□□□□ -0.02
ACTN1-206ENST00000544964 MPHOSPH10O00566 681 aaKnown RBP14.9□□□□□ -0.02
ACTN1-206ENST00000544964 AKR1B1P15121 316 aa14.9□□□□□ -0.02
ACTN1-206ENST00000544964 TMEM179Q6ZVK1 233 aa14.9□□□□□ -0.02
ACTN1-206ENST00000544964 SIAH1Q8IUQ4 282 aa14.9□□□□□ -0.02
ACTN1-206ENST00000544964 NPLOC4Q8TAT6 608 aa14.9□□□□□ -0.02
ACTN1-206ENST00000544964 SWAP70Q9UH65 585 aa14.9□□□□□ -0.02
ACTN1-206ENST00000544964 ZFYP08048 801 aaPredicted RBP14.89□□□□□ -0.03
ACTN1-206ENST00000544964 LRRFIP1Q32MZ4 808 aaKnown RBP14.89□□□□□ -0.03
ACTN1-206ENST00000544964 WDR78Q5VTH9 848 aa14.89□□□□□ -0.03
ACTN1-206ENST00000544964 SEC62Q99442 399 aaKnown RBP14.89□□□□□ -0.03
ACTN1-206ENST00000544964 MOV10L1Q9BXT6 1211 aaKnown RBP14.89□□□□□ -0.03
ACTN1-206ENST00000544964 TANGO6Q9C0B7 1094 aa14.89□□□□□ -0.03
ACTN1-206ENST00000544964 PUS7LQ9H0K6 701 aaKnown RBP14.89□□□□□ -0.03
ACTN1-206ENST00000544964 CWC22Q9HCG8 908 aaKnown RBP14.89□□□□□ -0.03
ACTN1-206ENST00000544964 ATP8A2Q9NTI2 1148 aa14.89□□□□□ -0.03
ACTN1-206ENST00000544964 ZNFX1Q9P2E3 1918 aaKnown RBP14.89□□□□□ -0.03
ACTN1-206ENST00000544964 LTBP2Q14767 1821 aa14.89□□□□□ -0.03
ACTN1-206ENST00000544964 M0R2C6 588 aa14.88□□□□□ -0.03
ACTN1-206ENST00000544964 SYN1P17600 705 aa14.88□□□□□ -0.03
ACTN1-206ENST00000544964 BMP8BP34820 402 aa14.88□□□□□ -0.03
ACTN1-206ENST00000544964 ICA1Q05084 483 aa14.88□□□□□ -0.03
ACTN1-206ENST00000544964 NMIQ13287 307 aaPredicted RBP14.88□□□□□ -0.03
ACTN1-206ENST00000544964 BMP2KLQ5H9B9 411 aa14.88□□□□□ -0.03
ACTN1-206ENST00000544964 ZMYM1Q5SVZ6 1142 aa14.88□□□□□ -0.03
ACTN1-206ENST00000544964 C12orf60Q5U649 245 aa14.88□□□□□ -0.03
ACTN1-206ENST00000544964 TRPV1Q8NER1 839 aa14.88□□□□□ -0.03
ACTN1-206ENST00000544964 APPBP2Q92624 585 aa14.88□□□□□ -0.03
ACTN1-206ENST00000544964 OSBP2Q969R2 916 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms