RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 SLC12A7Q9Y666 1083 aa8.16□□□□□ -1.1
HMGCS2-204ENST00000544913 MYH4Q9Y623 1939 aa8.16□□□□□ -1.1
HMGCS2-204ENST00000544913 BAZ2BQ9UIF8 2168 aaKnown RBP8.16□□□□□ -1.1
HMGCS2-204ENST00000544913 GOLGA8AA7E2F4 631 aa8.15□□□□□ -1.1
HMGCS2-204ENST00000544913 PLEKHA8P1O95397 391 aa8.15□□□□□ -1.1
HMGCS2-204ENST00000544913 GJB2P29033 226 aa8.15□□□□□ -1.1
HMGCS2-204ENST00000544913 LMOD1P29536 600 aaPredicted RBP8.15□□□□□ -1.1
HMGCS2-204ENST00000544913 TNNI2P48788 182 aa8.15□□□□□ -1.1
HMGCS2-204ENST00000544913 GRM4Q14833 912 aa8.15□□□□□ -1.1
HMGCS2-204ENST00000544913 KIAA1755Q5JYT7 1200 aa8.15□□□□□ -1.1
HMGCS2-204ENST00000544913 DPY19L2Q6NUT2 758 aa8.15□□□□□ -1.1
HMGCS2-204ENST00000544913 NFXL1Q6ZNB6 911 aa8.15□□□□□ -1.1
HMGCS2-204ENST00000544913 TMEM179Q6ZVK1 233 aa8.15□□□□□ -1.1
HMGCS2-204ENST00000544913 TMTC3Q6ZXV5 915 aa8.15□□□□□ -1.1
HMGCS2-204ENST00000544913 CMTR1Q8N1G2 835 aaKnown RBP8.15□□□□□ -1.1
HMGCS2-204ENST00000544913 STAG2Q8N3U4 1231 aa8.15□□□□□ -1.1
HMGCS2-204ENST00000544913 MKL1Q969V6 931 aa8.15□□□□□ -1.1
HMGCS2-204ENST00000544913 MAD2L2Q9UI95 211 aa8.15□□□□□ -1.1
HMGCS2-204ENST00000544913 PPP2R3BQ9Y5P8 575 aa8.15□□□□□ -1.1
HMGCS2-204ENST00000544913 PHIPQ8WWQ0 1821 aa8.15□□□□□ -1.1
HMGCS2-204ENST00000544913 DOCK1Q14185 1865 aa8.15□□□□□ -1.1
HMGCS2-204ENST00000544913 PALM3A6NDB9 673 aaPredicted RBP8.15□□□□□ -1.11
HMGCS2-204ENST00000544913 CCDC69A6NI79 296 aa8.15□□□□□ -1.11
HMGCS2-204ENST00000544913 CYTH3O43739 400 aa8.15□□□□□ -1.11
HMGCS2-204ENST00000544913 TOP1P11387 765 aaKnown RBP8.15□□□□□ -1.11
HMGCS2-204ENST00000544913 EEF2P13639 858 aaKnown RBP8.15□□□□□ -1.11
HMGCS2-204ENST00000544913 IFNAR1P17181 557 aa8.15□□□□□ -1.11
HMGCS2-204ENST00000544913 PDCP20941 246 aa8.15□□□□□ -1.11
HMGCS2-204ENST00000544913 SYT1P21579 422 aa8.15□□□□□ -1.11
HMGCS2-204ENST00000544913 INPP5BP32019 993 aa8.15□□□□□ -1.11
HMGCS2-204ENST00000544913 CAP2P40123 477 aa8.15□□□□□ -1.11
HMGCS2-204ENST00000544913 RTN1Q16799 776 aa8.15□□□□□ -1.11
HMGCS2-204ENST00000544913 ABCB5Q2M3G0 1257 aa8.15□□□□□ -1.11
HMGCS2-204ENST00000544913 CCDC84Q86UT8 332 aaPredicted RBP8.15□□□□□ -1.11
HMGCS2-204ENST00000544913 LRRC47Q8N1G4 583 aaKnown RBP8.15□□□□□ -1.11
HMGCS2-204ENST00000544913 SRBD1Q8N5C6 995 aaKnown RBP8.15□□□□□ -1.11
HMGCS2-204ENST00000544913 ACER1Q8TDN7 264 aa8.15□□□□□ -1.11
HMGCS2-204ENST00000544913 ZC3H15Q8WU90 426 aaKnown RBP8.15□□□□□ -1.11
HMGCS2-204ENST00000544913 AIFM3Q96NN9 605 aa8.15□□□□□ -1.11
HMGCS2-204ENST00000544913 MAP3K14Q99558 947 aa8.15□□□□□ -1.11
HMGCS2-204ENST00000544913 GLIS2Q9BZE0 524 aaPredicted RBP8.15□□□□□ -1.11
HMGCS2-204ENST00000544913 NYAP2Q9P242 653 aa8.15□□□□□ -1.11
HMGCS2-204ENST00000544913 STX8Q9UNK0 236 aa8.15□□□□□ -1.11
HMGCS2-204ENST00000544913 SMC3Q9UQE7 1217 aa8.15□□□□□ -1.11
HMGCS2-204ENST00000544913 MTMR6Q9Y217 621 aa8.15□□□□□ -1.11
HMGCS2-204ENST00000544913 CNTNAP5Q8WYK1 1306 aa8.15□□□□□ -1.11
HMGCS2-204ENST00000544913 ERICH2A1L162 156 aa8.14□□□□□ -1.11
HMGCS2-204ENST00000544913 PRPF40AO75400 957 aaKnown RBP8.14□□□□□ -1.11
HMGCS2-204ENST00000544913 LETM1O95202 739 aaPredicted RBP8.14□□□□□ -1.11
HMGCS2-204ENST00000544913 TTLL1O95922 423 aa8.14□□□□□ -1.11
HMGCS2-204ENST00000544913 PDHBP11177 359 aa8.14□□□□□ -1.11
HMGCS2-204ENST00000544913 VEGFAP15692 232 aaPredicted RBP8.14□□□□□ -1.11
HMGCS2-204ENST00000544913 PKN1Q16512 942 aa8.14□□□□□ -1.11
HMGCS2-204ENST00000544913 CCDC178Q5BJE1 867 aa8.14□□□□□ -1.11
HMGCS2-204ENST00000544913 CATIPQ7Z7H3 387 aa8.14□□□□□ -1.11
HMGCS2-204ENST00000544913 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.14□□□□□ -1.11
HMGCS2-204ENST00000544913 PHKBQ93100 1093 aa8.14□□□□□ -1.11
HMGCS2-204ENST00000544913 KLRG1Q96E93 195 aa8.14□□□□□ -1.11
HMGCS2-204ENST00000544913 DDX11Q96FC9 970 aa8.14□□□□□ -1.11
HMGCS2-204ENST00000544913 CHAMP1Q96JM3 812 aa8.14□□□□□ -1.11
HMGCS2-204ENST00000544913 KANSL2Q9H9L4 492 aa8.14□□□□□ -1.11
HMGCS2-204ENST00000544913 GJB4Q9NTQ9 266 aa8.14□□□□□ -1.11
HMGCS2-204ENST00000544913 STK36Q9NRP7 1315 aa8.14□□□□□ -1.11
HMGCS2-204ENST00000544913 USP17L5A8MUK1 530 aa8.13□□□□□ -1.11
HMGCS2-204ENST00000544913 ECE1P42892 770 aa8.13□□□□□ -1.11
HMGCS2-204ENST00000544913 ICA1Q05084 483 aa8.13□□□□□ -1.11
HMGCS2-204ENST00000544913 FMR1Q06787 632 aaKnown RBP eCLIP8.13□□□□□ -1.11
HMGCS2-204ENST00000544913 KRT26Q7Z3Y9 468 aa8.13□□□□□ -1.11
HMGCS2-204ENST00000544913 TMEM87AQ8NBN3 555 aa8.13□□□□□ -1.11
HMGCS2-204ENST00000544913 NUP133Q8WUM0 1156 aa8.13□□□□□ -1.11
HMGCS2-204ENST00000544913 CDCA5Q96FF9 252 aa8.13□□□□□ -1.11
HMGCS2-204ENST00000544913 CPVLQ9H3G5 476 aa8.13□□□□□ -1.11
HMGCS2-204ENST00000544913 KAT14Q9H8E8 782 aa8.13□□□□□ -1.11
HMGCS2-204ENST00000544913 NMRK2Q9NPI5 230 aa8.13□□□□□ -1.11
HMGCS2-204ENST00000544913 CLIP2Q9UDT6 1046 aa8.13□□□□□ -1.11
HMGCS2-204ENST00000544913 NAP1L2Q9ULW6 460 aaPredicted RBP8.13□□□□□ -1.11
HMGCS2-204ENST00000544913 IQCA1LA6NCM1 817 aa8.13□□□□□ -1.11
HMGCS2-204ENST00000544913 MPHOSPH10O00566 681 aaKnown RBP8.13□□□□□ -1.11
HMGCS2-204ENST00000544913 USP2O75604 605 aaPredicted RBP8.13□□□□□ -1.11
HMGCS2-204ENST00000544913 FMNL1O95466 1100 aaPredicted RBP8.13□□□□□ -1.11
HMGCS2-204ENST00000544913 NDUFB10O96000 172 aa8.13□□□□□ -1.11
HMGCS2-204ENST00000544913 GOLGA8HP0CJ92 632 aa8.13□□□□□ -1.11
HMGCS2-204ENST00000544913 CALM1P0DP23 149 aa8.13□□□□□ -1.11
HMGCS2-204ENST00000544913 CALM2P0DP24 149 aa8.13□□□□□ -1.11
HMGCS2-204ENST00000544913 CALM3P0DP25 149 aa8.13□□□□□ -1.11
HMGCS2-204ENST00000544913 ZSCAN22P10073 491 aaPredicted RBP8.13□□□□□ -1.11
HMGCS2-204ENST00000544913 ZNF543Q08ER8 600 aa8.13□□□□□ -1.11
HMGCS2-204ENST00000544913 NPY5RQ15761 445 aa8.13□□□□□ -1.11
HMGCS2-204ENST00000544913 USP17L2Q6R6M4 530 aa8.13□□□□□ -1.11
HMGCS2-204ENST00000544913 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.13□□□□□ -1.11
HMGCS2-204ENST00000544913 CDC37L1Q7L3B6 337 aa8.13□□□□□ -1.11
HMGCS2-204ENST00000544913 GMCL1P1Q8NEA9 526 aa8.13□□□□□ -1.11
HMGCS2-204ENST00000544913 ADAMTS3O15072 1205 aa8.12□□□□□ -1.11
HMGCS2-204ENST00000544913 STX6O43752 255 aa8.12□□□□□ -1.11
HMGCS2-204ENST00000544913 CTNND1O60716 968 aaKnown RBP8.12□□□□□ -1.11
HMGCS2-204ENST00000544913 CCDC173Q0VFZ6 552 aa8.12□□□□□ -1.11
HMGCS2-204ENST00000544913 PPP2R5BQ15173 497 aa8.12□□□□□ -1.11
HMGCS2-204ENST00000544913 NOL9Q5SY16 702 aaKnown RBP8.12□□□□□ -1.11
HMGCS2-204ENST00000544913 OTUD7BQ6GQQ9 843 aa8.12□□□□□ -1.11
HMGCS2-204ENST00000544913 USP48Q86UV5 1035 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms