RNA–Protein interactions for RNA: ENST00000544725.5

COPS7A-220, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-220ENST00000544725 LRRC41Q15345 812 aa17.8■□□□□ 0.44
COPS7A-220ENST00000544725 SH3RF1Q7Z6J0 888 aa17.8■□□□□ 0.44
COPS7A-220ENST00000544725 MIGA1Q8NAN2 632 aa17.8■□□□□ 0.44
COPS7A-220ENST00000544725 FERMT2Q96AC1 680 aa17.8■□□□□ 0.44
COPS7A-220ENST00000544725 RNPC3Q96LT9 517 aaKnown RBP17.8■□□□□ 0.44
COPS7A-220ENST00000544725 SPATC1LQ9H0A9 340 aa17.8■□□□□ 0.44
COPS7A-220ENST00000544725 TACC3Q9Y6A5 838 aa17.8■□□□□ 0.44
COPS7A-220ENST00000544725 IDH1O75874 414 aaKnown RBP17.79■□□□□ 0.44
COPS7A-220ENST00000544725 ERCC3P19447 782 aa17.79■□□□□ 0.44
COPS7A-220ENST00000544725 TLE2Q04725 743 aa17.79■□□□□ 0.44
COPS7A-220ENST00000544725 ZNF236Q9UL36 1845 aa17.79■□□□□ 0.44
COPS7A-220ENST00000544725 MUC3AQ02505 3323 aa17.78■□□□□ 0.44
COPS7A-220ENST00000544725 IPO8O15397 1037 aaKnown RBP17.78■□□□□ 0.44
COPS7A-220ENST00000544725 COBLO75128 1261 aa17.78■□□□□ 0.44
COPS7A-220ENST00000544725 CLTBP09497 229 aa17.78■□□□□ 0.44
COPS7A-220ENST00000544725 SHMT1P34896 483 aa17.78■□□□□ 0.44
COPS7A-220ENST00000544725 TJAP1Q5JTD0 557 aa17.78■□□□□ 0.44
COPS7A-220ENST00000544725 TMED8Q6PL24 325 aaPredicted RBP17.78■□□□□ 0.44
COPS7A-220ENST00000544725 ABRAQ8N0Z2 381 aa17.78■□□□□ 0.44
COPS7A-220ENST00000544725 MB21D1Q8N884 522 aa17.78■□□□□ 0.44
COPS7A-220ENST00000544725 TANGO6Q9C0B7 1094 aa17.78■□□□□ 0.44
COPS7A-220ENST00000544725 MROH8Q9H579 483 aa17.78■□□□□ 0.44
COPS7A-220ENST00000544725 MYH1P12882 1939 aa17.77■□□□□ 0.44
COPS7A-220ENST00000544725 GUCY1A2P33402 732 aa17.77■□□□□ 0.44
COPS7A-220ENST00000544725 SEPT2Q15019 361 aa17.77■□□□□ 0.44
COPS7A-220ENST00000544725 FAM47AQ5JRC9 791 aa17.77■□□□□ 0.44
COPS7A-220ENST00000544725 PRAMEF19Q5SWL8 479 aa17.77■□□□□ 0.44
COPS7A-220ENST00000544725 MAGEB6Q8N7X4 407 aa17.77■□□□□ 0.44
COPS7A-220ENST00000544725 PHF24Q9UPV7 400 aa17.77■□□□□ 0.44
COPS7A-220ENST00000544725 RARBP10826 455 aa17.76■□□□□ 0.43
COPS7A-220ENST00000544725 RAG1P15918 1043 aa17.76■□□□□ 0.43
COPS7A-220ENST00000544725 POLA2Q14181 598 aa17.76■□□□□ 0.43
COPS7A-220ENST00000544725 RNF180Q86T96 592 aa17.76■□□□□ 0.43
COPS7A-220ENST00000544725 NCAPG2Q86XI2 1143 aa17.76■□□□□ 0.43
COPS7A-220ENST00000544725 MAML3Q96JK9 1138 aa17.76■□□□□ 0.43
COPS7A-220ENST00000544725 XPNPEP3Q9NQH7 507 aa17.76■□□□□ 0.43
COPS7A-220ENST00000544725 NRBP1Q9UHY1 535 aa17.76■□□□□ 0.43
COPS7A-220ENST00000544725 A0A1W2PRG0 241 aa17.75■□□□□ 0.43
COPS7A-220ENST00000544725 ZNF316A6NFI3 1004 aaPredicted RBP17.75■□□□□ 0.43
COPS7A-220ENST00000544725 MPHOSPH10O00566 681 aaKnown RBP17.75■□□□□ 0.43
COPS7A-220ENST00000544725 KIAA0355O15063 1070 aa17.75■□□□□ 0.43
COPS7A-220ENST00000544725 SURF6O75683 361 aaKnown RBP17.75■□□□□ 0.43
COPS7A-220ENST00000544725 POLR3DP05423 398 aaPredicted RBP17.75■□□□□ 0.43
COPS7A-220ENST00000544725 TRIM27P14373 513 aa17.75■□□□□ 0.43
COPS7A-220ENST00000544725 ITGB8P26012 769 aa17.75■□□□□ 0.43
COPS7A-220ENST00000544725 PLCD1P51178 756 aa17.75■□□□□ 0.43
COPS7A-220ENST00000544725 FPGSQ05932 587 aa17.75■□□□□ 0.43
COPS7A-220ENST00000544725 MAP3K12Q12852 859 aa17.75■□□□□ 0.43
COPS7A-220ENST00000544725 PLS1Q14651 629 aa17.75■□□□□ 0.43
COPS7A-220ENST00000544725 DBNLQ9UJU6 430 aaKnown RBP17.75■□□□□ 0.43
COPS7A-220ENST00000544725 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.74■□□□□ 0.43
COPS7A-220ENST00000544725 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.74■□□□□ 0.43
COPS7A-220ENST00000544725 TNFRSF10AO00220 468 aa17.74■□□□□ 0.43
COPS7A-220ENST00000544725 FCER1AP12319 257 aa17.74■□□□□ 0.43
COPS7A-220ENST00000544725 DNAJB2P25686 324 aa17.74■□□□□ 0.43
COPS7A-220ENST00000544725 DSG3P32926 999 aa17.74■□□□□ 0.43
COPS7A-220ENST00000544725 EPHB4P54760 987 aa17.74■□□□□ 0.43
COPS7A-220ENST00000544725 GRIN2CQ14957 1233 aa17.74■□□□□ 0.43
COPS7A-220ENST00000544725 PQBP1O60828 265 aaKnown RBP17.73■□□□□ 0.43
COPS7A-220ENST00000544725 COL9A1P20849 921 aa17.73■□□□□ 0.43
COPS7A-220ENST00000544725 GABPAQ06546 454 aa17.73■□□□□ 0.43
COPS7A-220ENST00000544725 SSH3Q8TE77 659 aa17.73■□□□□ 0.43
COPS7A-220ENST00000544725 CCDC8Q9H0W5 538 aaPredicted RBP17.73■□□□□ 0.43
COPS7A-220ENST00000544725 TMEM39AQ9NV64 488 aa17.73■□□□□ 0.43
COPS7A-220ENST00000544725 TLR7Q9NYK1 1049 aaKnown RBP17.73■□□□□ 0.43
COPS7A-220ENST00000544725 MYO5AQ9Y4I1 1855 aaKnown RBP17.73■□□□□ 0.43
COPS7A-220ENST00000544725 FLOT1O75955 427 aa17.72■□□□□ 0.43
COPS7A-220ENST00000544725 SLC25A27O95847 323 aa17.72■□□□□ 0.43
COPS7A-220ENST00000544725 ATP8B2P98198 1209 aa17.72■□□□□ 0.43
COPS7A-220ENST00000544725 TMEM179Q6ZVK1 233 aa17.72■□□□□ 0.43
COPS7A-220ENST00000544725 USP38Q8NB14 1042 aa17.72■□□□□ 0.43
COPS7A-220ENST00000544725 FRAT1Q92837 279 aaPredicted RBP17.72■□□□□ 0.43
COPS7A-220ENST00000544725 ATG4CQ96DT6 458 aa17.72■□□□□ 0.43
COPS7A-220ENST00000544725 RIOK1Q9BRS2 568 aaKnown RBP17.72■□□□□ 0.43
COPS7A-220ENST00000544725 ZNF576Q9H609 170 aa17.72■□□□□ 0.43
COPS7A-220ENST00000544725 MAGEB6P1A0A0J9YX57 407 aa17.71■□□□□ 0.43
COPS7A-220ENST00000544725 A0A1W2PQ45 241 aaPredicted RBP17.71■□□□□ 0.43
COPS7A-220ENST00000544725 A0A1W2PQY0 241 aa17.71■□□□□ 0.43
COPS7A-220ENST00000544725 PGK1P00558 417 aa17.71■□□□□ 0.43
COPS7A-220ENST00000544725 CLUAP1Q96AJ1 413 aa17.71■□□□□ 0.43
COPS7A-220ENST00000544725 TIFAQ96CG3 184 aa17.71■□□□□ 0.43
COPS7A-220ENST00000544725 TOX2Q96NM4 488 aa17.71■□□□□ 0.43
COPS7A-220ENST00000544725 CRNKL1Q9BZJ0 848 aaKnown RBP17.71■□□□□ 0.43
COPS7A-220ENST00000544725 SH2D4AQ9H788 454 aa17.71■□□□□ 0.43
COPS7A-220ENST00000544725 MCM9Q9NXL9 1143 aa17.71■□□□□ 0.43
COPS7A-220ENST00000544725 TNNQ9UQP3 1299 aa17.71■□□□□ 0.43
COPS7A-220ENST00000544725 A0A0G2JMZ2 1700 aa17.71■□□□□ 0.43
COPS7A-220ENST00000544725 ROBO3Q96MS0 1386 aa17.7■□□□□ 0.42
COPS7A-220ENST00000544725 DCDC2CA8MYV0 355 aa17.7■□□□□ 0.42
COPS7A-220ENST00000544725 AKR1A1P14550 325 aa17.7■□□□□ 0.42
COPS7A-220ENST00000544725 ANKRD33Q7Z3H0 272 aa17.7■□□□□ 0.42
COPS7A-220ENST00000544725 EAF2Q96CJ1 260 aaPredicted RBP17.7■□□□□ 0.42
COPS7A-220ENST00000544725 GAS2L1Q99501 681 aaPredicted RBP17.7■□□□□ 0.42
COPS7A-220ENST00000544725 MMP19Q99542 508 aa17.7■□□□□ 0.42
COPS7A-220ENST00000544725 TINF2Q9BSI4 451 aa17.7■□□□□ 0.42
COPS7A-220ENST00000544725 ANTXR1Q9H6X2 564 aa17.7■□□□□ 0.42
COPS7A-220ENST00000544725 ARHGEF10LQ9HCE6 1279 aa17.7■□□□□ 0.42
COPS7A-220ENST00000544725 DIS3Q9Y2L1 958 aaKnown RBP17.7■□□□□ 0.42
COPS7A-220ENST00000544725 NOP58Q9Y2X3 529 aaKnown RBP17.7■□□□□ 0.42
COPS7A-220ENST00000544725 BCAR3O75815 825 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms