RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 RIOK1Q9BRS2 568 aaKnown RBP18.88■□□□□ 0.61
CD4-212ENST00000544344 CCDC8Q9H0W5 538 aaPredicted RBP18.88■□□□□ 0.61
CD4-212ENST00000544344 PRKAG2Q9UGJ0 569 aa18.88■□□□□ 0.61
CD4-212ENST00000544344 NOP58Q9Y2X3 529 aaKnown RBP18.88■□□□□ 0.61
CD4-212ENST00000544344 OS9Q13438 667 aaPredicted RBP18.87■□□□□ 0.61
CD4-212ENST00000544344 SEPT2Q15019 361 aa18.87■□□□□ 0.61
CD4-212ENST00000544344 TRIM60Q495X7 471 aa18.87■□□□□ 0.61
CD4-212ENST00000544344 SH3RF1Q7Z6J0 888 aa18.87■□□□□ 0.61
CD4-212ENST00000544344 ARRDC4Q8NCT1 418 aa18.87■□□□□ 0.61
CD4-212ENST00000544344 BADQ92934 168 aa18.87■□□□□ 0.61
CD4-212ENST00000544344 TTYH1Q9H313 450 aaPredicted RBP18.87■□□□□ 0.61
CD4-212ENST00000544344 NAV1Q8NEY1 1877 aa18.86■□□□□ 0.61
CD4-212ENST00000544344 SEPT4O43236 478 aa18.86■□□□□ 0.61
CD4-212ENST00000544344 STRNO43815 780 aa18.86■□□□□ 0.61
CD4-212ENST00000544344 COG2Q14746 738 aa18.86■□□□□ 0.61
CD4-212ENST00000544344 KIAA1755Q5JYT7 1200 aa18.86■□□□□ 0.61
CD4-212ENST00000544344 DPP9Q86TI2 863 aa18.86■□□□□ 0.61
CD4-212ENST00000544344 SPATC1LQ9H0A9 340 aa18.86■□□□□ 0.61
CD4-212ENST00000544344 CABP5Q9NP86 173 aa18.86■□□□□ 0.61
CD4-212ENST00000544344 PDLIM7Q9NR12 457 aa18.86■□□□□ 0.61
CD4-212ENST00000544344 SMCHD1A6NHR9 2005 aa18.85■□□□□ 0.61
CD4-212ENST00000544344 TRIM43BA6NCK2 446 aa18.85■□□□□ 0.61
CD4-212ENST00000544344 ERCC3P19447 782 aa18.85■□□□□ 0.61
CD4-212ENST00000544344 PRAMEF19Q5SWL8 479 aa18.85■□□□□ 0.61
CD4-212ENST00000544344 SHCBP1Q8NEM2 672 aa18.85■□□□□ 0.61
CD4-212ENST00000544344 MAFAQ8NHW3 353 aaPredicted RBP18.85■□□□□ 0.61
CD4-212ENST00000544344 TRIM43Q96BQ3 446 aaPredicted RBP18.85■□□□□ 0.61
CD4-212ENST00000544344 C1orf115Q9H7X2 142 aa18.85■□□□□ 0.61
CD4-212ENST00000544344 TTC28Q96AY4 2481 aa18.85■□□□□ 0.61
CD4-212ENST00000544344 PARP14Q460N5 1801 aa18.85■□□□□ 0.61
CD4-212ENST00000544344 KBTBD13C9JR72 458 aa18.84■□□□□ 0.61
CD4-212ENST00000544344 ADCYAP1R1P41586 468 aa18.84■□□□□ 0.61
CD4-212ENST00000544344 SMAD3P84022 425 aaKnown RBP18.84■□□□□ 0.61
CD4-212ENST00000544344 C1orf53Q5VUE5 145 aa18.84■□□□□ 0.61
CD4-212ENST00000544344 MYLIPQ8WY64 445 aa18.84■□□□□ 0.61
CD4-212ENST00000544344 PRDM5Q9NQX1 630 aaPredicted RBP18.84■□□□□ 0.61
CD4-212ENST00000544344 HOXC10Q9NYD6 342 aa18.84■□□□□ 0.61
CD4-212ENST00000544344 ZNFX1Q9P2E3 1918 aaKnown RBP18.84■□□□□ 0.61
CD4-212ENST00000544344 ITGB8P26012 769 aa18.83■□□□□ 0.6
CD4-212ENST00000544344 MAP3K12Q12852 859 aa18.83■□□□□ 0.6
CD4-212ENST00000544344 LRRC41Q15345 812 aa18.83■□□□□ 0.6
CD4-212ENST00000544344 TMED8Q6PL24 325 aaPredicted RBP18.83■□□□□ 0.6
CD4-212ENST00000544344 FAM47AQ5JRC9 791 aa18.82■□□□□ 0.6
CD4-212ENST00000544344 SIAH1Q8IUQ4 282 aa18.82■□□□□ 0.6
CD4-212ENST00000544344 FERMT2Q96AC1 680 aa18.82■□□□□ 0.6
CD4-212ENST00000544344 MAML3Q96JK9 1138 aa18.82■□□□□ 0.6
CD4-212ENST00000544344 TANGO6Q9C0B7 1094 aa18.82■□□□□ 0.6
CD4-212ENST00000544344 POLR3DP05423 398 aaPredicted RBP18.81■□□□□ 0.6
CD4-212ENST00000544344 DSG3P32926 999 aa18.81■□□□□ 0.6
CD4-212ENST00000544344 EPHB4P54760 987 aa18.81■□□□□ 0.6
CD4-212ENST00000544344 TLE2Q04725 743 aa18.81■□□□□ 0.6
CD4-212ENST00000544344 ABRAQ8N0Z2 381 aa18.81■□□□□ 0.6
CD4-212ENST00000544344 MROH8Q9H579 483 aa18.81■□□□□ 0.6
CD4-212ENST00000544344 COL11A1P12107 1806 aaPredicted RBP18.8■□□□□ 0.6
CD4-212ENST00000544344 MAGEB6P1A0A0J9YX57 407 aa18.8■□□□□ 0.6
CD4-212ENST00000544344 MYCNP04198 464 aaPredicted RBP18.8■□□□□ 0.6
CD4-212ENST00000544344 ZKSCAN2Q63HK3 967 aa18.8■□□□□ 0.6
CD4-212ENST00000544344 MB21D1Q8N884 522 aa18.8■□□□□ 0.6
CD4-212ENST00000544344 SLC44A5Q8NCS7 719 aa18.8■□□□□ 0.6
CD4-212ENST00000544344 ATG4CQ96DT6 458 aa18.8■□□□□ 0.6
CD4-212ENST00000544344 PHF24Q9UPV7 400 aa18.8■□□□□ 0.6
CD4-212ENST00000544344 MPHOSPH10O00566 681 aaKnown RBP18.79■□□□□ 0.6
CD4-212ENST00000544344 CYP2D6P10635 497 aa18.79■□□□□ 0.6
CD4-212ENST00000544344 NCAPG2Q86XI2 1143 aa18.79■□□□□ 0.6
CD4-212ENST00000544344 CLEC10AQ8IUN9 316 aa18.79■□□□□ 0.6
CD4-212ENST00000544344 MCM9Q9NXL9 1143 aa18.79■□□□□ 0.6
CD4-212ENST00000544344 MUC3AQ02505 3323 aa18.79■□□□□ 0.6
CD4-212ENST00000544344 MYH8P13535 1937 aa18.78■□□□□ 0.6
CD4-212ENST00000544344 PLXNA1Q9UIW2 1896 aa18.78■□□□□ 0.6
CD4-212ENST00000544344 PDE6AP16499 860 aa18.78■□□□□ 0.6
CD4-212ENST00000544344 TMEM179Q6ZVK1 233 aa18.78■□□□□ 0.6
CD4-212ENST00000544344 SDR42E1Q8WUS8 393 aa18.78■□□□□ 0.6
CD4-212ENST00000544344 DCP1AQ9NPI6 582 aaPredicted RBP18.78■□□□□ 0.6
CD4-212ENST00000544344 SLC5A4Q9NY91 659 aa18.78■□□□□ 0.6
CD4-212ENST00000544344 TCRBV5S4A2TA0A5A2 114 aa18.77■□□□□ 0.6
CD4-212ENST00000544344 KIAA0355O15063 1070 aa18.77■□□□□ 0.6
CD4-212ENST00000544344 FLOT1O75955 427 aa18.77■□□□□ 0.6
CD4-212ENST00000544344 RLBP1P12271 317 aa18.77■□□□□ 0.6
CD4-212ENST00000544344 FOSL2P15408 326 aa18.77■□□□□ 0.6
CD4-212ENST00000544344 PLS1Q14651 629 aa18.77■□□□□ 0.6
CD4-212ENST00000544344 TMEM132BQ14DG7 1078 aa18.77■□□□□ 0.6
CD4-212ENST00000544344 AACSQ86V21 672 aa18.77■□□□□ 0.6
CD4-212ENST00000544344 SPICE1Q8N0Z3 855 aa18.77■□□□□ 0.6
CD4-212ENST00000544344 DYNLL2Q96FJ2 89 aa18.77■□□□□ 0.6
CD4-212ENST00000544344 CRNKL1Q9BZJ0 848 aaKnown RBP18.77■□□□□ 0.6
CD4-212ENST00000544344 PRDM6Q9NQX0 595 aa18.77■□□□□ 0.6
CD4-212ENST00000544344 ADAMTS5Q9UNA0 930 aa18.77■□□□□ 0.6
CD4-212ENST00000544344 TMX2Q9Y320 296 aa18.77■□□□□ 0.6
CD4-212ENST00000544344 TACC3Q9Y6A5 838 aa18.77■□□□□ 0.6
CD4-212ENST00000544344 TMEM265A0A087WTH1 108 aa18.76■□□□□ 0.59
CD4-212ENST00000544344 SMIM22K7EJ46 135 aa18.76■□□□□ 0.59
CD4-212ENST00000544344 CLTBP09497 229 aa18.76■□□□□ 0.59
CD4-212ENST00000544344 FCER1AP12319 257 aa18.76■□□□□ 0.59
CD4-212ENST00000544344 AKR1B1P15121 316 aa18.76■□□□□ 0.59
CD4-212ENST00000544344 TAL1P17542 331 aaPredicted RBP18.76■□□□□ 0.59
CD4-212ENST00000544344 SLC9C2Q5TAH2 1124 aa18.76■□□□□ 0.59
CD4-212ENST00000544344 LCORLQ8N3X6 602 aa18.76■□□□□ 0.59
CD4-212ENST00000544344 VCPKMTQ9H867 229 aa18.76■□□□□ 0.59
CD4-212ENST00000544344 XPNPEP3Q9NQH7 507 aa18.76■□□□□ 0.59
CD4-212ENST00000544344 NRBP1Q9UHY1 535 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms