RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 LINC00301Q8NCQ3 95 aa22.91■■□□□ 1.26
COPS7A-218ENST00000543939 MYH4Q9Y623 1939 aa22.91■■□□□ 1.26
COPS7A-218ENST00000543939 SYCE3A1L190 88 aa22.91■■□□□ 1.26
COPS7A-218ENST00000543939 LIG1P18858 919 aa22.91■■□□□ 1.26
COPS7A-218ENST00000543939 NOSTRINQ8IVI9 506 aa22.91■■□□□ 1.26
COPS7A-218ENST00000543939 ZSCAN29Q8IWY8 852 aaPredicted RBP22.91■■□□□ 1.26
COPS7A-218ENST00000543939 MTMR14Q8NCE2 650 aa22.91■■□□□ 1.26
COPS7A-218ENST00000543939 PHF20Q9BVI0 1012 aa22.91■■□□□ 1.26
COPS7A-218ENST00000543939 VPS54Q9P1Q0 977 aa22.91■■□□□ 1.26
COPS7A-218ENST00000543939 SLURP2P0DP57 97 aa22.9■■□□□ 1.26
COPS7A-218ENST00000543939 SCG2P13521 617 aa22.9■■□□□ 1.26
COPS7A-218ENST00000543939 PFKFB3Q16875 520 aaPredicted RBP22.9■■□□□ 1.26
COPS7A-218ENST00000543939 SLC35G1Q2M3R5 365 aa22.9■■□□□ 1.26
COPS7A-218ENST00000543939 ANO1Q5XXA6 986 aa22.9■■□□□ 1.26
COPS7A-218ENST00000543939 LZTS2Q9BRK4 669 aa22.9■■□□□ 1.26
COPS7A-218ENST00000543939 TMOD2Q9NZR1 351 aa22.9■■□□□ 1.26
COPS7A-218ENST00000543939 ZNF70Q9UC06 446 aaPredicted RBP22.9■■□□□ 1.26
COPS7A-218ENST00000543939 LRSAM1Q6UWE0 723 aa22.89■■□□□ 1.26
COPS7A-218ENST00000543939 STK38Q15208 465 aa22.88■■□□□ 1.25
COPS7A-218ENST00000543939 SPDYE2Q495Y8 402 aa22.88■■□□□ 1.25
COPS7A-218ENST00000543939 TATDN1Q6P1N9 297 aa22.88■■□□□ 1.25
COPS7A-218ENST00000543939 NLGN2Q8NFZ4 835 aa22.88■■□□□ 1.25
COPS7A-218ENST00000543939 TTLL1O95922 423 aa22.88■■□□□ 1.25
COPS7A-218ENST00000543939 PARP1P09874 1014 aaKnown RBP22.88■■□□□ 1.25
COPS7A-218ENST00000543939 TNIP1Q15025 636 aa22.88■■□□□ 1.25
COPS7A-218ENST00000543939 BICD2Q8TD16 824 aa22.88■■□□□ 1.25
COPS7A-218ENST00000543939 KCNG4Q8TDN1 519 aa22.88■■□□□ 1.25
COPS7A-218ENST00000543939 OXER1Q8TDS5 423 aa22.88■■□□□ 1.25
COPS7A-218ENST00000543939 ZBED3Q96IU2 234 aaPredicted RBP22.88■■□□□ 1.25
COPS7A-218ENST00000543939 MTMR7Q9Y216 660 aa22.88■■□□□ 1.25
COPS7A-218ENST00000543939 FAM196BA6NMK8 535 aa22.87■■□□□ 1.25
COPS7A-218ENST00000543939 KLRF2D3W0D1 207 aa22.87■■□□□ 1.25
COPS7A-218ENST00000543939 CYTH3O43739 400 aa22.87■■□□□ 1.25
COPS7A-218ENST00000543939 LETM1O95202 739 aaPredicted RBP22.87■■□□□ 1.25
COPS7A-218ENST00000543939 MRE11P49959 708 aa22.87■■□□□ 1.25
COPS7A-218ENST00000543939 RASGRP2Q7LDG7 609 aa22.87■■□□□ 1.25
COPS7A-218ENST00000543939 SPZ1Q9BXG8 430 aa22.87■■□□□ 1.25
COPS7A-218ENST00000543939 GRPEL1Q9HAV7 217 aa22.87■■□□□ 1.25
COPS7A-218ENST00000543939 GOLGB1Q14789 3259 aaKnown RBP22.86■■□□□ 1.25
COPS7A-218ENST00000543939 CLRN2A0PK11 232 aa22.86■■□□□ 1.25
COPS7A-218ENST00000543939 SPTLC2O15270 562 aa22.86■■□□□ 1.25
COPS7A-218ENST00000543939 GOLGA8HP0CJ92 632 aa22.86■■□□□ 1.25
COPS7A-218ENST00000543939 SMARCA1P28370 1054 aa22.86■■□□□ 1.25
COPS7A-218ENST00000543939 ME1P48163 572 aa22.86■■□□□ 1.25
COPS7A-218ENST00000543939 NR5A1Q13285 461 aa22.86■■□□□ 1.25
COPS7A-218ENST00000543939 SLC39A14Q15043 492 aa22.86■■□□□ 1.25
COPS7A-218ENST00000543939 NPY5RQ15761 445 aa22.86■■□□□ 1.25
COPS7A-218ENST00000543939 CERKLQ49MI3 558 aaPredicted RBP22.86■■□□□ 1.25
COPS7A-218ENST00000543939 PPP4R3BQ5MIZ7 849 aa22.86■■□□□ 1.25
COPS7A-218ENST00000543939 USP17L2Q6R6M4 530 aa22.86■■□□□ 1.25
COPS7A-218ENST00000543939 CLEC10AQ8IUN9 316 aa22.86■■□□□ 1.25
COPS7A-218ENST00000543939 TRIM34Q9BYJ4 488 aa22.86■■□□□ 1.25
COPS7A-218ENST00000543939 CLIP2Q9UDT6 1046 aa22.86■■□□□ 1.25
COPS7A-218ENST00000543939 PCDHA7Q9UN72 937 aa22.86■■□□□ 1.25
COPS7A-218ENST00000543939 TCP10L2B9ZVM9 353 aa22.85■■□□□ 1.25
COPS7A-218ENST00000543939 MPHOSPH10O00566 681 aaKnown RBP22.85■■□□□ 1.25
COPS7A-218ENST00000543939 PDHBP11177 359 aa22.85■■□□□ 1.25
COPS7A-218ENST00000543939 VEGFAP15692 232 aaPredicted RBP22.85■■□□□ 1.25
COPS7A-218ENST00000543939 KRT2P35908 639 aa22.85■■□□□ 1.25
COPS7A-218ENST00000543939 RASSF7Q02833 373 aa22.85■■□□□ 1.25
COPS7A-218ENST00000543939 SF3A1Q15459 793 aaKnown RBP22.85■■□□□ 1.25
COPS7A-218ENST00000543939 FKBP1CQ5VVH2 108 aa22.85■■□□□ 1.25
COPS7A-218ENST00000543939 LRRC47Q8N1G4 583 aaKnown RBP22.85■■□□□ 1.25
COPS7A-218ENST00000543939 FAM151AQ8WW52 585 aa22.85■■□□□ 1.25
COPS7A-218ENST00000543939 USP17L5A8MUK1 530 aa22.85■■□□□ 1.25
COPS7A-218ENST00000543939 SNHG28P0DPA3 235 aa22.85■■□□□ 1.25
COPS7A-218ENST00000543939 MMP14P50281 582 aa22.85■■□□□ 1.25
COPS7A-218ENST00000543939 PRELPP51888 382 aa22.85■■□□□ 1.25
COPS7A-218ENST00000543939 EIF6P56537 245 aaKnown RBP22.85■■□□□ 1.25
COPS7A-218ENST00000543939 PTPAQ15257 358 aa22.85■■□□□ 1.25
COPS7A-218ENST00000543939 ADALQ6DHV7 355 aa22.85■■□□□ 1.25
COPS7A-218ENST00000543939 PIBF1Q8WXW3 757 aa22.85■■□□□ 1.25
COPS7A-218ENST00000543939 SH3GLB2Q9NR46 395 aa22.85■■□□□ 1.25
COPS7A-218ENST00000543939 DDX19AQ9NUU7 478 aaKnown RBP22.85■■□□□ 1.25
COPS7A-218ENST00000543939 DACT1Q9NYF0 836 aa22.85■■□□□ 1.25
COPS7A-218ENST00000543939 CNTNAP1P78357 1384 aa22.84■■□□□ 1.25
COPS7A-218ENST00000543939 XRCC6P12956 609 aaKnown RBP eCLIP22.84■■□□□ 1.25
COPS7A-218ENST00000543939 TOB1P50616 345 aaPredicted RBP22.84■■□□□ 1.25
COPS7A-218ENST00000543939 RILPL1Q5EBL4 403 aa22.84■■□□□ 1.25
COPS7A-218ENST00000543939 CCAR1Q8IX12 1150 aaKnown RBP22.84■■□□□ 1.25
COPS7A-218ENST00000543939 CSRNP1Q96S65 589 aa22.84■■□□□ 1.25
COPS7A-218ENST00000543939 A0A1W2PQ27 194 aa22.83■■□□□ 1.25
COPS7A-218ENST00000543939 A0A1W2PQ64 194 aa22.83■■□□□ 1.25
COPS7A-218ENST00000543939 A0A1W2PQD8 194 aa22.83■■□□□ 1.25
COPS7A-218ENST00000543939 RPS12P25398 132 aaKnown RBP22.83■■□□□ 1.25
COPS7A-218ENST00000543939 TNFRSF25Q93038 417 aa22.83■■□□□ 1.25
COPS7A-218ENST00000543939 SPON1Q9HCB6 807 aa22.83■■□□□ 1.25
COPS7A-218ENST00000543939 BRMS1Q9HCU9 246 aa22.83■■□□□ 1.25
COPS7A-218ENST00000543939 NR1I2O75469 434 aa22.82■■□□□ 1.24
COPS7A-218ENST00000543939 ZNF280AP59817 542 aaPredicted RBP22.82■■□□□ 1.24
COPS7A-218ENST00000543939 ASPRV1Q53RT3 343 aa22.82■■□□□ 1.24
COPS7A-218ENST00000543939 GOLPH3LQ9H4A5 285 aa22.82■■□□□ 1.24
COPS7A-218ENST00000543939 FZD9O00144 591 aa22.82■■□□□ 1.24
COPS7A-218ENST00000543939 PPP6R2O75170 966 aa22.82■■□□□ 1.24
COPS7A-218ENST00000543939 NLRP5P59047 1200 aa22.82■■□□□ 1.24
COPS7A-218ENST00000543939 SHROOM1Q2M3G4 852 aaPredicted RBP22.82■■□□□ 1.24
COPS7A-218ENST00000543939 MKL1Q969V6 931 aa22.82■■□□□ 1.24
COPS7A-218ENST00000543939 NUP62CLQ9H1M0 184 aa22.82■■□□□ 1.24
COPS7A-218ENST00000543939 KANSL2Q9H9L4 492 aa22.82■■□□□ 1.24
COPS7A-218ENST00000543939 MYOZ2Q9NPC6 264 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms