RNA–Protein interactions for RNA: ENST00000543082.5

TCF4-208, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-208ENST00000543082 NTRK3Q16288 839 aa10.93□□□□□ -0.66
TCF4-208ENST00000543082 YTHDF3Q7Z739 585 aaKnown RBP10.93□□□□□ -0.66
TCF4-208ENST00000543082 MICU3Q86XE3 530 aa10.93□□□□□ -0.66
TCF4-208ENST00000543082 KCNH5Q8NCM2 988 aa10.93□□□□□ -0.66
TCF4-208ENST00000543082 TMEM87BQ96K49 555 aa10.93□□□□□ -0.66
TCF4-208ENST00000543082 CAPZA3Q96KX2 299 aa10.93□□□□□ -0.66
TCF4-208ENST00000543082 RUFY1Q96T51 708 aa10.93□□□□□ -0.66
TCF4-208ENST00000543082 FOXP1Q9H334 677 aaPredicted RBP10.93□□□□□ -0.66
TCF4-208ENST00000543082 TAOK2Q9UL54 1235 aa10.93□□□□□ -0.66
TCF4-208ENST00000543082 ABCC12Q96J65 1359 aa10.93□□□□□ -0.66
TCF4-208ENST00000543082 FMNL1O95466 1100 aaPredicted RBP10.92□□□□□ -0.66
TCF4-208ENST00000543082 MYCNP04198 464 aaPredicted RBP10.92□□□□□ -0.66
TCF4-208ENST00000543082 COPB1P53618 953 aaKnown RBP10.92□□□□□ -0.66
TCF4-208ENST00000543082 CASP7P55210 303 aa10.92□□□□□ -0.66
TCF4-208ENST00000543082 KRT83P78385 493 aa10.92□□□□□ -0.66
TCF4-208ENST00000543082 PLCB4Q15147 1175 aa10.92□□□□□ -0.66
TCF4-208ENST00000543082 CCDC122Q5T0U0 273 aa10.92□□□□□ -0.66
TCF4-208ENST00000543082 ALS2CLQ60I27 953 aa10.92□□□□□ -0.66
TCF4-208ENST00000543082 SND1Q7KZF4 910 aaKnown RBP eCLIP10.92□□□□□ -0.66
TCF4-208ENST00000543082 SH3RF1Q7Z6J0 888 aa10.92□□□□□ -0.66
TCF4-208ENST00000543082 DIS3L2Q8IYB7 885 aaKnown RBP10.92□□□□□ -0.66
TCF4-208ENST00000543082 JPH2Q9BR39 696 aaPredicted RBP10.92□□□□□ -0.66
TCF4-208ENST00000543082 EHD4Q9H223 541 aa10.92□□□□□ -0.66
TCF4-208ENST00000543082 TRIM10Q9UDY6 481 aa10.92□□□□□ -0.66
TCF4-208ENST00000543082 TBC1D2BQ9UPU7 963 aa10.92□□□□□ -0.66
TCF4-208ENST00000543082 CTNND2Q9UQB3 1225 aa10.92□□□□□ -0.66
TCF4-208ENST00000543082 SAMM50Q9Y512 469 aa10.92□□□□□ -0.66
TCF4-208ENST00000543082 TJP1Q07157 1748 aa10.92□□□□□ -0.66
TCF4-208ENST00000543082 LRRC10BA6NIK2 292 aa10.92□□□□□ -0.66
TCF4-208ENST00000543082 TMCO5BA8MYB1 307 aa10.92□□□□□ -0.66
TCF4-208ENST00000543082 PPP1R3GB7ZBB8 358 aa10.92□□□□□ -0.66
TCF4-208ENST00000543082 KRT86O43790 486 aa10.92□□□□□ -0.66
TCF4-208ENST00000543082 ZMYND10O75800 440 aa10.92□□□□□ -0.66
TCF4-208ENST00000543082 RXRAP19793 462 aa10.92□□□□□ -0.66
TCF4-208ENST00000543082 TDO2P48775 406 aa10.92□□□□□ -0.66
TCF4-208ENST00000543082 FAM69CQ0P6D2 419 aa10.92□□□□□ -0.66
TCF4-208ENST00000543082 C14orf37Q86TY3 774 aa10.92□□□□□ -0.66
TCF4-208ENST00000543082 MMGT1Q8N4V1 131 aa10.92□□□□□ -0.66
TCF4-208ENST00000543082 SLC26A6Q9BXS9 759 aa10.92□□□□□ -0.66
TCF4-208ENST00000543082 AATFQ9NY61 560 aaKnown RBP eCLIP10.92□□□□□ -0.66
TCF4-208ENST00000543082 IQSEC3Q9UPP2 1182 aaPredicted RBP10.92□□□□□ -0.66
TCF4-208ENST00000543082 MYH2Q9UKX2 1941 aa10.92□□□□□ -0.66
TCF4-208ENST00000543082 BTBD18B2RXH4 712 aa10.91□□□□□ -0.66
TCF4-208ENST00000543082 SRGAP2O75044 1071 aa10.91□□□□□ -0.66
TCF4-208ENST00000543082 ITIH3Q06033 890 aa10.91□□□□□ -0.66
TCF4-208ENST00000543082 TSR1Q2NL82 804 aaKnown RBP10.91□□□□□ -0.66
TCF4-208ENST00000543082 NFXL1Q6ZNB6 911 aa10.91□□□□□ -0.66
TCF4-208ENST00000543082 CYB5R4Q7L1T6 521 aa10.91□□□□□ -0.66
TCF4-208ENST00000543082 KIAA1328Q86T90 577 aa10.91□□□□□ -0.66
TCF4-208ENST00000543082 FNBP4Q8N3X1 1017 aaPredicted RBP10.91□□□□□ -0.66
TCF4-208ENST00000543082 LRRC59Q96AG4 307 aaKnown RBP10.91□□□□□ -0.66
TCF4-208ENST00000543082 CSRNP2Q9H175 543 aa10.91□□□□□ -0.66
TCF4-208ENST00000543082 MCM8Q9UJA3 840 aa10.91□□□□□ -0.66
TCF4-208ENST00000543082 NID2Q14112 1375 aa10.91□□□□□ -0.66
TCF4-208ENST00000543082 MYO1FO00160 1098 aa10.91□□□□□ -0.66
TCF4-208ENST00000543082 EYA2O00167 538 aa10.91□□□□□ -0.66
TCF4-208ENST00000543082 GPAA1O43292 621 aa10.91□□□□□ -0.66
TCF4-208ENST00000543082 HSF2BPO75031 334 aa10.91□□□□□ -0.66
TCF4-208ENST00000543082 CIAO1O76071 339 aa10.91□□□□□ -0.66
TCF4-208ENST00000543082 CDC25AP30304 524 aa10.91□□□□□ -0.66
TCF4-208ENST00000543082 ELF1P32519 619 aa10.91□□□□□ -0.66
TCF4-208ENST00000543082 EPHB4P54760 987 aa10.91□□□□□ -0.66
TCF4-208ENST00000543082 HERVK_113P62684 666 aa10.91□□□□□ -0.66
TCF4-208ENST00000543082 FOXO4P98177 505 aa10.91□□□□□ -0.66
TCF4-208ENST00000543082 FKBP4Q02790 459 aaKnown RBP eCLIP10.91□□□□□ -0.66
TCF4-208ENST00000543082 DPYDQ12882 1025 aa10.91□□□□□ -0.66
TCF4-208ENST00000543082 PREPLQ4J6C6 727 aaPredicted RBP10.91□□□□□ -0.66
TCF4-208ENST00000543082 EMBQ6PCB8 327 aa10.91□□□□□ -0.66
TCF4-208ENST00000543082 ZNF790Q6PG37 636 aa10.91□□□□□ -0.66
TCF4-208ENST00000543082 LRP10Q7Z4F1 713 aa10.91□□□□□ -0.66
TCF4-208ENST00000543082 SGMS1Q86VZ5 419 aa10.91□□□□□ -0.66
TCF4-208ENST00000543082 OR8K1Q8NGG5 319 aa10.91□□□□□ -0.66
TCF4-208ENST00000543082 PAGE5Q96GU1 130 aa10.91□□□□□ -0.66
TCF4-208ENST00000543082 DNAJC7Q99615 494 aa10.91□□□□□ -0.66
TCF4-208ENST00000543082 CHP1Q99653 195 aa10.91□□□□□ -0.66
TCF4-208ENST00000543082 STRN4Q9NRL3 753 aa10.91□□□□□ -0.66
TCF4-208ENST00000543082 RNF225M0QZC1 329 aaPredicted RBP10.9□□□□□ -0.66
TCF4-208ENST00000543082 IFNAR1P17181 557 aa10.9□□□□□ -0.66
TCF4-208ENST00000543082 AFMP43652 599 aa10.9□□□□□ -0.66
TCF4-208ENST00000543082 SATB1Q01826 763 aa10.9□□□□□ -0.66
TCF4-208ENST00000543082 C2orf54Q08AI8 447 aa10.9□□□□□ -0.66
TCF4-208ENST00000543082 TTF1Q15361 905 aaPredicted RBP10.9□□□□□ -0.66
TCF4-208ENST00000543082 ZKSCAN4Q969J2 545 aaPredicted RBP10.9□□□□□ -0.66
TCF4-208ENST00000543082 VPS16Q9H269 839 aa10.9□□□□□ -0.66
TCF4-208ENST00000543082 RABEP2Q9H5N1 569 aa10.9□□□□□ -0.66
TCF4-208ENST00000543082 TAB2Q9NYJ8 693 aa10.9□□□□□ -0.66
TCF4-208ENST00000543082 RWDD2AQ9UIY3 292 aa10.9□□□□□ -0.66
TCF4-208ENST00000543082 PCDHB6Q9Y5E3 794 aa10.9□□□□□ -0.66
TCF4-208ENST00000543082 FER1L4A9Z1Z3 1794 aa10.9□□□□□ -0.66
TCF4-208ENST00000543082 LRP6O75581 1613 aa10.9□□□□□ -0.66
TCF4-208ENST00000543082 PKD1L3Q7Z443 1732 aa10.9□□□□□ -0.66
TCF4-208ENST00000543082 ATRNO75882 1429 aa10.9□□□□□ -0.66
TCF4-208ENST00000543082 KCNJ18B7U540 433 aa10.9□□□□□ -0.66
TCF4-208ENST00000543082 NF2P35240 595 aa10.9□□□□□ -0.66
TCF4-208ENST00000543082 CYLC1P35663 651 aaPredicted RBP10.9□□□□□ -0.66
TCF4-208ENST00000543082 NAP1L1P55209 391 aaKnown RBP10.9□□□□□ -0.66
TCF4-208ENST00000543082 APBA1Q02410 837 aa10.9□□□□□ -0.66
TCF4-208ENST00000543082 PDCLQ13371 301 aa10.9□□□□□ -0.66
TCF4-208ENST00000543082 DRP2Q13474 957 aa10.9□□□□□ -0.66
TCF4-208ENST00000543082 KCNJ12Q14500 433 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms