RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 TICAM2Q86XR7 235 aa20.86■□□□□ 0.93
LTBR-210ENST00000542830 EXOC6Q8TAG9 804 aa20.86■□□□□ 0.93
LTBR-210ENST00000542830 MKNK2Q9HBH9 465 aa20.86■□□□□ 0.93
LTBR-210ENST00000542830 HOXC10Q9NYD6 342 aa20.86■□□□□ 0.93
LTBR-210ENST00000542830 SPDYE16A6NNV3 312 aaPredicted RBP20.85■□□□□ 0.93
LTBR-210ENST00000542830 PEX10O60683 326 aa20.85■□□□□ 0.93
LTBR-210ENST00000542830 CNMDO75829 334 aa20.85■□□□□ 0.93
LTBR-210ENST00000542830 HMGCRP04035 888 aa20.85■□□□□ 0.93
LTBR-210ENST00000542830 POTEEQ6S8J3 1075 aa20.85■□□□□ 0.93
LTBR-210ENST00000542830 GPR142Q7Z601 462 aa20.85■□□□□ 0.93
LTBR-210ENST00000542830 PLEKHH3Q7Z736 793 aa20.85■□□□□ 0.93
LTBR-210ENST00000542830 SIAH1Q8IUQ4 282 aa20.85■□□□□ 0.93
LTBR-210ENST00000542830 IFNL3Q8IZI9 196 aa20.85■□□□□ 0.93
LTBR-210ENST00000542830 SEC62Q99442 399 aaKnown RBP20.85■□□□□ 0.93
LTBR-210ENST00000542830 TANGO6Q9C0B7 1094 aa20.85■□□□□ 0.93
LTBR-210ENST00000542830 LNPKQ9C0E8 428 aa20.85■□□□□ 0.93
LTBR-210ENST00000542830 UNC93B1Q9H1C4 597 aa20.85■□□□□ 0.93
LTBR-210ENST00000542830 PORCNQ9H237 461 aa20.85■□□□□ 0.93
LTBR-210ENST00000542830 CWC22Q9HCG8 908 aaKnown RBP20.85■□□□□ 0.93
LTBR-210ENST00000542830 XRCC5P13010 732 aaKnown RBP20.84■□□□□ 0.93
LTBR-210ENST00000542830 EEF2P13639 858 aaKnown RBP20.84■□□□□ 0.93
LTBR-210ENST00000542830 CLEC10AQ8IUN9 316 aa20.84■□□□□ 0.93
LTBR-210ENST00000542830 TRMT44Q8IYL2 757 aaKnown RBP20.84■□□□□ 0.93
LTBR-210ENST00000542830 WDR46O15213 610 aaKnown RBP20.83■□□□□ 0.93
LTBR-210ENST00000542830 SLC3A2P08195 630 aaKnown RBP20.83■□□□□ 0.93
LTBR-210ENST00000542830 CYP2B6P20813 491 aa20.83■□□□□ 0.93
LTBR-210ENST00000542830 RASA1P20936 1047 aa20.83■□□□□ 0.93
LTBR-210ENST00000542830 ATP2B2Q01814 1243 aa20.83■□□□□ 0.93
LTBR-210ENST00000542830 MB21D1Q8N884 522 aa20.83■□□□□ 0.93
LTBR-210ENST00000542830 SHISA4Q96DD7 197 aa20.83■□□□□ 0.93
LTBR-210ENST00000542830 NAPBQ9H115 298 aa20.83■□□□□ 0.93
LTBR-210ENST00000542830 GOPCQ9HD26 462 aa20.83■□□□□ 0.93
LTBR-210ENST00000542830 SUPT16HQ9Y5B9 1047 aaKnown RBP20.83■□□□□ 0.93
LTBR-210ENST00000542830 RGS2P41220 211 aa20.82■□□□□ 0.92
LTBR-210ENST00000542830 KIAA1755Q5JYT7 1200 aa20.82■□□□□ 0.92
LTBR-210ENST00000542830 B4GALNT3Q6L9W6 998 aa20.82■□□□□ 0.92
LTBR-210ENST00000542830 ZNF444Q8N0Y2 327 aaPredicted RBP20.82■□□□□ 0.92
LTBR-210ENST00000542830 SPICE1Q8N0Z3 855 aa20.82■□□□□ 0.92
LTBR-210ENST00000542830 U2AF1L4Q8WU68 220 aaKnown RBP20.82■□□□□ 0.92
LTBR-210ENST00000542830 BTBD7Q9P203 1132 aa20.82■□□□□ 0.92
LTBR-210ENST00000542830 MKI67P46013 3256 aaKnown RBP20.82■□□□□ 0.92
LTBR-210ENST00000542830 FLOT1O75955 427 aa20.81■□□□□ 0.92
LTBR-210ENST00000542830 SGPL1O95470 568 aa20.81■□□□□ 0.92
LTBR-210ENST00000542830 PDE4BQ07343 736 aa20.81■□□□□ 0.92
LTBR-210ENST00000542830 MORN1Q5T089 497 aa20.81■□□□□ 0.92
LTBR-210ENST00000542830 CHD1LQ86WJ1 897 aa20.81■□□□□ 0.92
LTBR-210ENST00000542830 STK11IPQ8N1F8 1099 aa20.81■□□□□ 0.92
LTBR-210ENST00000542830 USP6NLQ92738 828 aa20.81■□□□□ 0.92
LTBR-210ENST00000542830 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.81■□□□□ 0.92
LTBR-210ENST00000542830 PAK6Q9NQU5 681 aaPredicted RBP20.81■□□□□ 0.92
LTBR-210ENST00000542830 HELLSQ9NRZ9 838 aa20.81■□□□□ 0.92
LTBR-210ENST00000542830 IVNS1ABPQ9Y6Y0 642 aa20.81■□□□□ 0.92
LTBR-210ENST00000542830 RPTORQ8N122 1335 aa20.8■□□□□ 0.92
LTBR-210ENST00000542830 IGHDP01880 384 aa20.8■□□□□ 0.92
LTBR-210ENST00000542830 DSG3P32926 999 aa20.8■□□□□ 0.92
LTBR-210ENST00000542830 NUCB1Q02818 461 aa20.8■□□□□ 0.92
LTBR-210ENST00000542830 WDR78Q5VTH9 848 aa20.8■□□□□ 0.92
LTBR-210ENST00000542830 APBA2Q99767 749 aa20.8■□□□□ 0.92
LTBR-210ENST00000542830 NYAP2Q9P242 653 aa20.8■□□□□ 0.92
LTBR-210ENST00000542830 PLXNB2O15031 1838 aa20.8■□□□□ 0.92
LTBR-210ENST00000542830 SLC15A5A6NIM6 579 aa20.79■□□□□ 0.92
LTBR-210ENST00000542830 ZKSCAN1P17029 563 aaPredicted RBP20.79■□□□□ 0.92
LTBR-210ENST00000542830 MAP2K5Q13163 448 aa20.79■□□□□ 0.92
LTBR-210ENST00000542830 TRIB2Q92519 343 aa20.79■□□□□ 0.92
LTBR-210ENST00000542830 DEFB118Q96PH6 123 aa20.79■□□□□ 0.92
LTBR-210ENST00000542830 SPATC1LQ9H0A9 340 aa20.79■□□□□ 0.92
LTBR-210ENST00000542830 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.79■□□□□ 0.92
LTBR-210ENST00000542830 HMX1Q9NP08 348 aaPredicted RBP20.79■□□□□ 0.92
LTBR-210ENST00000542830 GREB1LQ9C091 1923 aaPredicted RBP20.78■□□□□ 0.92
LTBR-210ENST00000542830 TRIM6-TRIM34B2RNG4 842 aa20.78■□□□□ 0.92
LTBR-210ENST00000542830 PTPREP23469 700 aa20.78■□□□□ 0.92
LTBR-210ENST00000542830 PPARAQ07869 468 aa20.78■□□□□ 0.92
LTBR-210ENST00000542830 SHCBP1Q8NEM2 672 aa20.78■□□□□ 0.92
LTBR-210ENST00000542830 OSBPL3Q9H4L5 887 aa20.78■□□□□ 0.92
LTBR-210ENST00000542830 IGKV6D-41A0A0C4DH26 115 aa20.77■□□□□ 0.92
LTBR-210ENST00000542830 PRDM1O75626 825 aa20.77■□□□□ 0.92
LTBR-210ENST00000542830 TFRCP02786 760 aaKnown RBP20.77■□□□□ 0.92
LTBR-210ENST00000542830 GRB14Q14449 540 aa20.77■□□□□ 0.92
LTBR-210ENST00000542830 MCMDC2Q4G0Z9 681 aa20.77■□□□□ 0.92
LTBR-210ENST00000542830 CCDC129Q6ZRS4 1044 aa20.77■□□□□ 0.92
LTBR-210ENST00000542830 MOV10L1Q9BXT6 1211 aaKnown RBP20.77■□□□□ 0.92
LTBR-210ENST00000542830 SYNPO2Q9UMS6 1093 aa20.77■□□□□ 0.92
LTBR-210ENST00000542830 RLFQ13129 1914 aa20.76■□□□□ 0.91
LTBR-210ENST00000542830 PLIN4Q96Q06 1357 aa20.76■□□□□ 0.91
LTBR-210ENST00000542830 STRNO43815 780 aa20.76■□□□□ 0.91
LTBR-210ENST00000542830 RAD21O60216 631 aa20.76■□□□□ 0.91
LTBR-210ENST00000542830 FARP2O94887 1054 aaPredicted RBP20.76■□□□□ 0.91
LTBR-210ENST00000542830 MAP3K21Q5TCX8 1036 aa20.76■□□□□ 0.91
LTBR-210ENST00000542830 UBE2Q1Q7Z7E8 422 aa20.76■□□□□ 0.91
LTBR-210ENST00000542830 PLEKHM2Q8IWE5 1019 aa20.76■□□□□ 0.91
LTBR-210ENST00000542830 ATG4CQ96DT6 458 aa20.76■□□□□ 0.91
LTBR-210ENST00000542830 CRISPLD2Q9H0B8 497 aa20.76■□□□□ 0.91
LTBR-210ENST00000542830 A0A0G2JMZ2 1700 aa20.75■□□□□ 0.91
LTBR-210ENST00000542830 HOXC6P09630 235 aa20.75■□□□□ 0.91
LTBR-210ENST00000542830 TSPY3P0CV98 308 aa20.75■□□□□ 0.91
LTBR-210ENST00000542830 TSPY8P0CW00 308 aa20.75■□□□□ 0.91
LTBR-210ENST00000542830 PRKAR2AP13861 404 aaKnown RBP20.75■□□□□ 0.91
LTBR-210ENST00000542830 TRIM32Q13049 653 aa20.75■□□□□ 0.91
LTBR-210ENST00000542830 ALX1Q15699 326 aa20.75■□□□□ 0.91
LTBR-210ENST00000542830 PPP4R3BQ5MIZ7 849 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms