RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 KARSQ15046 597 aaKnown RBP11.49□□□□□ -0.57
TOP3A-208ENST00000542570 PRR16Q569H4 304 aa11.49□□□□□ -0.57
TOP3A-208ENST00000542570 CC2D2BQ6DHV5 1058 aa11.49□□□□□ -0.57
TOP3A-208ENST00000542570 TMEM47Q9BQJ4 181 aa11.49□□□□□ -0.57
TOP3A-208ENST00000542570 PSTPIP2Q9H939 334 aa11.49□□□□□ -0.57
TOP3A-208ENST00000542570 LRWD1Q9UFC0 647 aa11.49□□□□□ -0.57
TOP3A-208ENST00000542570 NRXN3Q9Y4C0 1643 aa11.49□□□□□ -0.57
TOP3A-208ENST00000542570 BACH1O14867 736 aa11.48□□□□□ -0.57
TOP3A-208ENST00000542570 ANTXR2P58335 489 aa11.48□□□□□ -0.57
TOP3A-208ENST00000542570 DDR1Q08345 913 aa11.48□□□□□ -0.57
TOP3A-208ENST00000542570 SLC15A2Q16348 729 aa11.48□□□□□ -0.57
TOP3A-208ENST00000542570 AMIGO3Q86WK7 504 aa11.48□□□□□ -0.57
TOP3A-208ENST00000542570 EPSTI1Q96J88 318 aa11.48□□□□□ -0.57
TOP3A-208ENST00000542570 CLSTN2Q9H4D0 955 aa11.48□□□□□ -0.57
TOP3A-208ENST00000542570 LY9Q9HBG7 655 aa11.48□□□□□ -0.57
TOP3A-208ENST00000542570 A0A0U1RQG5 324 aaPredicted RBP11.48□□□□□ -0.57
TOP3A-208ENST00000542570 SKILP12757 684 aa11.48□□□□□ -0.57
TOP3A-208ENST00000542570 DPEP1P16444 411 aa11.48□□□□□ -0.57
TOP3A-208ENST00000542570 GRIK5Q16478 980 aa11.48□□□□□ -0.57
TOP3A-208ENST00000542570 NELFCDQ8IXH7 590 aa11.48□□□□□ -0.57
TOP3A-208ENST00000542570 SNX29Q8TEQ0 813 aa11.48□□□□□ -0.57
TOP3A-208ENST00000542570 IFT172Q9UG01 1749 aa11.48□□□□□ -0.57
TOP3A-208ENST00000542570 FLOT1O75955 427 aa11.48□□□□□ -0.57
TOP3A-208ENST00000542570 CACNB1Q02641 598 aaPredicted RBP11.48□□□□□ -0.57
TOP3A-208ENST00000542570 ARHGAP29Q52LW3 1261 aa11.48□□□□□ -0.57
TOP3A-208ENST00000542570 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.48□□□□□ -0.57
TOP3A-208ENST00000542570 V9GYY5 206 aaPredicted RBP11.48□□□□□ -0.57
TOP3A-208ENST00000542570 URI1O94763 535 aaPredicted RBP11.47□□□□□ -0.57
TOP3A-208ENST00000542570 AKR1B1P15121 316 aa11.47□□□□□ -0.57
TOP3A-208ENST00000542570 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.47□□□□□ -0.57
TOP3A-208ENST00000542570 CSRNP2Q9H175 543 aa11.47□□□□□ -0.57
TOP3A-208ENST00000542570 BCL2L12Q9HB09 334 aa11.47□□□□□ -0.57
TOP3A-208ENST00000542570 RNF216Q9NWF9 866 aaPredicted RBP11.47□□□□□ -0.57
TOP3A-208ENST00000542570 SHPRHQ149N8 1683 aa11.47□□□□□ -0.57
TOP3A-208ENST00000542570 ELP1O95163 1332 aa11.47□□□□□ -0.57
TOP3A-208ENST00000542570 AMPD3Q01432 767 aa11.47□□□□□ -0.57
TOP3A-208ENST00000542570 RASGRP2Q7LDG7 609 aa11.47□□□□□ -0.57
TOP3A-208ENST00000542570 LRP10Q7Z4F1 713 aa11.47□□□□□ -0.57
TOP3A-208ENST00000542570 TAOK3Q9H2K8 898 aa11.47□□□□□ -0.57
TOP3A-208ENST00000542570 DAGLAQ9Y4D2 1042 aa11.47□□□□□ -0.57
TOP3A-208ENST00000542570 TBCAO75347 108 aaKnown RBP11.47□□□□□ -0.57
TOP3A-208ENST00000542570 IFNAR1P17181 557 aa11.47□□□□□ -0.57
TOP3A-208ENST00000542570 PDE4DQ08499 809 aa11.47□□□□□ -0.57
TOP3A-208ENST00000542570 NFIAQ12857 509 aa11.47□□□□□ -0.57
TOP3A-208ENST00000542570 ADALQ6DHV7 355 aa11.47□□□□□ -0.57
TOP3A-208ENST00000542570 TTBK2Q6IQ55 1244 aa11.47□□□□□ -0.57
TOP3A-208ENST00000542570 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.47□□□□□ -0.57
TOP3A-208ENST00000542570 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.47□□□□□ -0.57
TOP3A-208ENST00000542570 CNTNAP4Q9C0A0 1308 aa11.47□□□□□ -0.57
TOP3A-208ENST00000542570 HARSP12081 509 aaKnown RBP11.46□□□□□ -0.57
TOP3A-208ENST00000542570 CIAPIN1Q6FI81 312 aa11.46□□□□□ -0.57
TOP3A-208ENST00000542570 KIAA1328Q86T90 577 aa11.46□□□□□ -0.57
TOP3A-208ENST00000542570 CCDC112Q8NEF3 446 aa11.46□□□□□ -0.57
TOP3A-208ENST00000542570 PDGFDQ9GZP0 370 aaPredicted RBP11.46□□□□□ -0.57
TOP3A-208ENST00000542570 CTNND2Q9UQB3 1225 aa11.46□□□□□ -0.57
TOP3A-208ENST00000542570 USP17L15C9J2P7 530 aa11.46□□□□□ -0.57
TOP3A-208ENST00000542570 USP17L13C9JLJ4 530 aa11.46□□□□□ -0.57
TOP3A-208ENST00000542570 USP17L11C9JVI0 530 aa11.46□□□□□ -0.57
TOP3A-208ENST00000542570 USP17L18D6R9N7 530 aa11.46□□□□□ -0.57
TOP3A-208ENST00000542570 USP17L22D6RA61 530 aa11.46□□□□□ -0.57
TOP3A-208ENST00000542570 USP17L17D6RBQ6 530 aa11.46□□□□□ -0.57
TOP3A-208ENST00000542570 USP17L19D6RCP7 530 aa11.46□□□□□ -0.57
TOP3A-208ENST00000542570 USP17L20D6RJB6 530 aa11.46□□□□□ -0.57
TOP3A-208ENST00000542570 TRIM21P19474 475 aaKnown RBP11.46□□□□□ -0.57
TOP3A-208ENST00000542570 NF2P35240 595 aa11.46□□□□□ -0.57
TOP3A-208ENST00000542570 USP17L24Q0WX57 530 aa11.46□□□□□ -0.57
TOP3A-208ENST00000542570 RESTQ13127 1097 aa11.46□□□□□ -0.57
TOP3A-208ENST00000542570 HSP90AA2PQ14568 343 aaPredicted RBP11.46□□□□□ -0.57
TOP3A-208ENST00000542570 PTPN14Q15678 1187 aa11.46□□□□□ -0.57
TOP3A-208ENST00000542570 CALCRLQ16602 461 aa11.46□□□□□ -0.57
TOP3A-208ENST00000542570 KANK3Q6NY19 840 aa11.46□□□□□ -0.57
TOP3A-208ENST00000542570 USP17L6PQ6QN14 398 aa11.46□□□□□ -0.57
TOP3A-208ENST00000542570 FBXO33Q7Z6M2 555 aa11.46□□□□□ -0.57
TOP3A-208ENST00000542570 DRC1Q96MC2 740 aa11.46□□□□□ -0.57
TOP3A-208ENST00000542570 NFE2L3Q9Y4A8 694 aa11.46□□□□□ -0.57
TOP3A-208ENST00000542570 PCDHA5Q9Y5H7 936 aa11.46□□□□□ -0.57
TOP3A-208ENST00000542570 KIF28PB7ZC32 967 aa11.46□□□□□ -0.58
TOP3A-208ENST00000542570 EEPD1Q7L9B9 569 aa11.46□□□□□ -0.58
TOP3A-208ENST00000542570 SP8Q8IXZ3 490 aa11.46□□□□□ -0.58
TOP3A-208ENST00000542570 RDH13Q8NBN7 331 aa11.46□□□□□ -0.58
TOP3A-208ENST00000542570 ATP6V0A2Q9Y487 856 aa11.46□□□□□ -0.58
TOP3A-208ENST00000542570 UQCRHLA0A096LP55 91 aa11.45□□□□□ -0.58
TOP3A-208ENST00000542570 UQCRHP07919 91 aa11.45□□□□□ -0.58
TOP3A-208ENST00000542570 TNS2Q63HR2 1409 aa11.45□□□□□ -0.58
TOP3A-208ENST00000542570 PODNQ7Z5L7 613 aa11.45□□□□□ -0.58
TOP3A-208ENST00000542570 TPH2Q8IWU9 490 aa11.45□□□□□ -0.58
TOP3A-208ENST00000542570 SYMPKQ92797 1274 aaKnown RBP11.45□□□□□ -0.58
TOP3A-208ENST00000542570 PI4KBQ9UBF8 816 aa11.45□□□□□ -0.58
TOP3A-208ENST00000542570 PIK3C2AO00443 1686 aa11.45□□□□□ -0.58
TOP3A-208ENST00000542570 ADGRB2O60241 1585 aa11.45□□□□□ -0.58
TOP3A-208ENST00000542570 TESPA1A2RU30 521 aaPredicted RBP11.45□□□□□ -0.58
TOP3A-208ENST00000542570 NEMFO60524 1076 aa11.45□□□□□ -0.58
TOP3A-208ENST00000542570 CUTAO60888 179 aa11.45□□□□□ -0.58
TOP3A-208ENST00000542570 TTLL1O95922 423 aa11.45□□□□□ -0.58
TOP3A-208ENST00000542570 LIFRP42702 1097 aa11.45□□□□□ -0.58
TOP3A-208ENST00000542570 EXOSC10Q01780 885 aaKnown RBP11.45□□□□□ -0.58
TOP3A-208ENST00000542570 LINC00301Q8NCQ3 95 aa11.45□□□□□ -0.58
TOP3A-208ENST00000542570 FAM212AQ96EL1 285 aa11.45□□□□□ -0.58
TOP3A-208ENST00000542570 TCHPQ9BT92 498 aa11.45□□□□□ -0.58
TOP3A-208ENST00000542570 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms