RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 APPBP2Q92624 585 aa10.4□□□□□ -0.74
THBS3-211ENST00000541990 PCDHA5Q9Y5H7 936 aa10.4□□□□□ -0.74
THBS3-211ENST00000541990 MYH3P11055 1940 aa10.4□□□□□ -0.74
THBS3-211ENST00000541990 TCRBV5S4A2TA0A5A2 114 aa10.4□□□□□ -0.75
THBS3-211ENST00000541990 MINDY4BA8MYZ0 360 aa10.4□□□□□ -0.75
THBS3-211ENST00000541990 TPM1P09493 284 aa10.4□□□□□ -0.75
THBS3-211ENST00000541990 PRR29P0C7W0 189 aa10.4□□□□□ -0.75
THBS3-211ENST00000541990 ANTXR2P58335 489 aa10.4□□□□□ -0.75
THBS3-211ENST00000541990 GRIN1Q05586 938 aa10.4□□□□□ -0.75
THBS3-211ENST00000541990 SYNE3Q6ZMZ3 975 aa10.4□□□□□ -0.75
THBS3-211ENST00000541990 GRAMD1CQ8IYS0 662 aa10.4□□□□□ -0.75
THBS3-211ENST00000541990 EPB41L4AQ9HCS5 686 aaPredicted RBP10.4□□□□□ -0.75
THBS3-211ENST00000541990 ABCB6Q9NP58 842 aa10.4□□□□□ -0.75
THBS3-211ENST00000541990 SCAF8Q9UPN6 1271 aaKnown RBP10.4□□□□□ -0.75
THBS3-211ENST00000541990 HPSEQ9Y251 543 aa10.4□□□□□ -0.75
THBS3-211ENST00000541990 RREB1Q92766 1687 aa10.4□□□□□ -0.75
THBS3-211ENST00000541990 UBR3Q6ZT12 1888 aa10.39□□□□□ -0.75
THBS3-211ENST00000541990 RHOXF2BP0C7M4 288 aa10.39□□□□□ -0.75
THBS3-211ENST00000541990 BAG6P46379 1132 aa10.39□□□□□ -0.75
THBS3-211ENST00000541990 UBE4AQ14139 1066 aa10.39□□□□□ -0.75
THBS3-211ENST00000541990 CRY2Q49AN0 593 aa10.39□□□□□ -0.75
THBS3-211ENST00000541990 RBM17Q96I25 401 aaKnown RBP10.39□□□□□ -0.75
THBS3-211ENST00000541990 RHOXF2Q9BQY4 288 aa10.39□□□□□ -0.75
THBS3-211ENST00000541990 DSCC1Q9BVC3 393 aa10.39□□□□□ -0.75
THBS3-211ENST00000541990 PPEF1O14829 653 aaPredicted RBP10.39□□□□□ -0.75
THBS3-211ENST00000541990 CBFA2T2O43439 604 aa10.39□□□□□ -0.75
THBS3-211ENST00000541990 C21orf2O43822 256 aa10.39□□□□□ -0.75
THBS3-211ENST00000541990 CUTAO60888 179 aa10.39□□□□□ -0.75
THBS3-211ENST00000541990 UQCRFS1P1P0C7P4 283 aa10.39□□□□□ -0.75
THBS3-211ENST00000541990 CHMP4BP1P59074 171 aa10.39□□□□□ -0.75
THBS3-211ENST00000541990 MECOMQ03112 1051 aa10.39□□□□□ -0.75
THBS3-211ENST00000541990 RAD9BQ6WBX8 426 aa10.39□□□□□ -0.75
THBS3-211ENST00000541990 FBXO33Q7Z6M2 555 aa10.39□□□□□ -0.75
THBS3-211ENST00000541990 TBC1D10CQ8IV04 446 aa10.39□□□□□ -0.75
THBS3-211ENST00000541990 MYL10Q9BUA6 226 aa10.39□□□□□ -0.75
THBS3-211ENST00000541990 NBPF3Q9H094 633 aa10.39□□□□□ -0.75
THBS3-211ENST00000541990 SAMSN1Q9NSI8 373 aaKnown RBP10.39□□□□□ -0.75
THBS3-211ENST00000541990 SLC4A4Q9Y6R1 1079 aa10.39□□□□□ -0.75
THBS3-211ENST00000541990 PCNTO95613 3336 aa10.38□□□□□ -0.75
THBS3-211ENST00000541990 CCDC151A5D8V7 595 aa10.38□□□□□ -0.75
THBS3-211ENST00000541990 CYP2D6P10635 497 aa10.38□□□□□ -0.75
THBS3-211ENST00000541990 GTF2IP78347 998 aa10.38□□□□□ -0.75
THBS3-211ENST00000541990 MAP3K12Q12852 859 aa10.38□□□□□ -0.75
THBS3-211ENST00000541990 SLC39A14Q15043 492 aa10.38□□□□□ -0.75
THBS3-211ENST00000541990 SKIDA1Q1XH10 827 aa10.38□□□□□ -0.75
THBS3-211ENST00000541990 FCHSD1Q86WN1 690 aa10.38□□□□□ -0.75
THBS3-211ENST00000541990 TBC1D16Q8TBP0 767 aa10.38□□□□□ -0.75
THBS3-211ENST00000541990 TEX33O43247 280 aa10.38□□□□□ -0.75
THBS3-211ENST00000541990 PRC1O43663 620 aa10.38□□□□□ -0.75
THBS3-211ENST00000541990 SCNN1DP51172 638 aa10.38□□□□□ -0.75
THBS3-211ENST00000541990 VSNL1P62760 191 aa10.38□□□□□ -0.75
THBS3-211ENST00000541990 IRX3P78415 501 aaPredicted RBP10.38□□□□□ -0.75
THBS3-211ENST00000541990 PTPAQ15257 358 aa10.38□□□□□ -0.75
THBS3-211ENST00000541990 PHKBQ93100 1093 aa10.38□□□□□ -0.75
THBS3-211ENST00000541990 STRBPQ96SI9 672 aaKnown RBP10.38□□□□□ -0.75
THBS3-211ENST00000541990 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.38□□□□□ -0.75
THBS3-211ENST00000541990 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.38□□□□□ -0.75
THBS3-211ENST00000541990 HELLSQ9NRZ9 838 aa10.38□□□□□ -0.75
THBS3-211ENST00000541990 NFE2L3Q9Y4A8 694 aa10.38□□□□□ -0.75
THBS3-211ENST00000541990 B4E1Z4 1266 aa10.37□□□□□ -0.75
THBS3-211ENST00000541990 CPLX3Q8WVH0 158 aa10.37□□□□□ -0.75
THBS3-211ENST00000541990 PSD3Q9NYI0 1048 aa10.37□□□□□ -0.75
THBS3-211ENST00000541990 GGA1Q9UJY5 639 aa10.37□□□□□ -0.75
THBS3-211ENST00000541990 BCORQ6W2J9 1755 aa10.37□□□□□ -0.75
THBS3-211ENST00000541990 RFX7Q2KHR2 1363 aa10.37□□□□□ -0.75
THBS3-211ENST00000541990 SRGAP1Q7Z6B7 1085 aa10.37□□□□□ -0.75
THBS3-211ENST00000541990 BRIP1Q9BX63 1249 aa10.37□□□□□ -0.75
THBS3-211ENST00000541990 RNF216Q9NWF9 866 aaPredicted RBP10.37□□□□□ -0.75
THBS3-211ENST00000541990 CWC15Q9P013 229 aaKnown RBP10.37□□□□□ -0.75
THBS3-211ENST00000541990 MTMR7Q9Y216 660 aa10.37□□□□□ -0.75
THBS3-211ENST00000541990 CPLX1O14810 134 aa10.37□□□□□ -0.75
THBS3-211ENST00000541990 STX10O60499 249 aa10.37□□□□□ -0.75
THBS3-211ENST00000541990 SPECC1LQ69YQ0 1117 aa10.37□□□□□ -0.75
THBS3-211ENST00000541990 BRAPQ7Z569 592 aa10.37□□□□□ -0.75
THBS3-211ENST00000541990 CCDC82Q8N4S0 544 aa10.37□□□□□ -0.75
THBS3-211ENST00000541990 IQUBQ8NA54 791 aa10.37□□□□□ -0.75
THBS3-211ENST00000541990 CNNM3Q8NE01 707 aa10.37□□□□□ -0.75
THBS3-211ENST00000541990 RGS22Q8NE09 1264 aa10.37□□□□□ -0.75
THBS3-211ENST00000541990 CD209Q9NNX6 404 aa10.37□□□□□ -0.75
THBS3-211ENST00000541990 MAN1B1Q9UKM7 699 aa10.37□□□□□ -0.75
THBS3-211ENST00000541990 SCN7AQ01118 1682 aa10.37□□□□□ -0.75
THBS3-211ENST00000541990 RTL9Q8NET4 1388 aa10.36□□□□□ -0.75
THBS3-211ENST00000541990 AKAP11Q9UKA4 1901 aa10.36□□□□□ -0.75
THBS3-211ENST00000541990 LRRIQ3A6PVS8 624 aaPredicted RBP10.36□□□□□ -0.75
THBS3-211ENST00000541990 GSG1L2A8MUP6 293 aa10.36□□□□□ -0.75
THBS3-211ENST00000541990 COBLO75128 1261 aa10.36□□□□□ -0.75
THBS3-211ENST00000541990 ZNF18P17022 549 aa10.36□□□□□ -0.75
THBS3-211ENST00000541990 TDO2P48775 406 aa10.36□□□□□ -0.75
THBS3-211ENST00000541990 MB21D2Q8IYB1 491 aaPredicted RBP10.36□□□□□ -0.75
THBS3-211ENST00000541990 NOA1Q8NC60 698 aaKnown RBP10.36□□□□□ -0.75
THBS3-211ENST00000541990 MAP3K14Q99558 947 aa10.36□□□□□ -0.75
THBS3-211ENST00000541990 EFCC1Q9HA90 598 aa10.36□□□□□ -0.75
THBS3-211ENST00000541990 GNL3LQ9NVN8 582 aaKnown RBP10.36□□□□□ -0.75
THBS3-211ENST00000541990 SAP30BPQ9UHR5 308 aaKnown RBP10.36□□□□□ -0.75
THBS3-211ENST00000541990 L1RE1Q9UN81 338 aa10.36□□□□□ -0.75
THBS3-211ENST00000541990 XDHP47989 1333 aa10.36□□□□□ -0.75
THBS3-211ENST00000541990 EIF3CLB5ME19 914 aaKnown RBP10.36□□□□□ -0.75
THBS3-211ENST00000541990 CACNB3P54284 484 aa10.36□□□□□ -0.75
THBS3-211ENST00000541990 BRD3Q15059 726 aa10.36□□□□□ -0.75
THBS3-211ENST00000541990 RESP18Q5W5W9 173 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms