RNA–Protein interactions for RNA: ENST00000541795.1

RAB6A-208, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB6A, Length 1,812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-208ENST00000541795 MAD2L2Q9UI95 211 aa20.48■□□□□ 0.87
RAB6A-208ENST00000541795 TNFAIP1Q13829 316 aa20.48■□□□□ 0.87
RAB6A-208ENST00000541795 KRT40Q6A162 431 aa20.48■□□□□ 0.87
RAB6A-208ENST00000541795 CLIP2Q9UDT6 1046 aa20.48■□□□□ 0.87
RAB6A-208ENST00000541795 KRT85P78386 507 aa20.47■□□□□ 0.87
RAB6A-208ENST00000541795 ABCB5Q2M3G0 1257 aa20.47■□□□□ 0.87
RAB6A-208ENST00000541795 TMEM179Q6ZVK1 233 aa20.47■□□□□ 0.87
RAB6A-208ENST00000541795 LRRC47Q8N1G4 583 aaKnown RBP20.47■□□□□ 0.87
RAB6A-208ENST00000541795 STAG2Q8N3U4 1231 aa20.47■□□□□ 0.87
RAB6A-208ENST00000541795 GPRC5DQ9NZD1 345 aa20.47■□□□□ 0.87
RAB6A-208ENST00000541795 FIBPO43427 364 aa20.46■□□□□ 0.87
RAB6A-208ENST00000541795 GDF11O95390 407 aa20.46■□□□□ 0.87
RAB6A-208ENST00000541795 SHROOM1Q2M3G4 852 aaPredicted RBP20.46■□□□□ 0.87
RAB6A-208ENST00000541795 SKOR2Q2VWA4 1001 aaPredicted RBP20.46■□□□□ 0.87
RAB6A-208ENST00000541795 TMEM87AQ8NBN3 555 aa20.46■□□□□ 0.87
RAB6A-208ENST00000541795 V9GY48 417 aaPredicted RBP20.46■□□□□ 0.87
RAB6A-208ENST00000541795 BAZ2BQ9UIF8 2168 aaKnown RBP20.46■□□□□ 0.87
RAB6A-208ENST00000541795 PALM3A6NDB9 673 aaPredicted RBP20.46■□□□□ 0.87
RAB6A-208ENST00000541795 PARP1P09874 1014 aaKnown RBP20.46■□□□□ 0.87
RAB6A-208ENST00000541795 ATP2B2Q01814 1243 aa20.46■□□□□ 0.87
RAB6A-208ENST00000541795 RASA3Q14644 834 aa20.46■□□□□ 0.87
RAB6A-208ENST00000541795 PKN1Q16512 942 aa20.46■□□□□ 0.87
RAB6A-208ENST00000541795 RASGRP2Q7LDG7 609 aa20.46■□□□□ 0.87
RAB6A-208ENST00000541795 USP48Q86UV5 1035 aa20.46■□□□□ 0.87
RAB6A-208ENST00000541795 CDAN1Q8IWY9 1227 aa20.46■□□□□ 0.87
RAB6A-208ENST00000541795 KANSL2Q9H9L4 492 aa20.46■□□□□ 0.87
RAB6A-208ENST00000541795 PGAP2Q9UHJ9 254 aa20.46■□□□□ 0.87
RAB6A-208ENST00000541795 ASTN2O75129 1339 aaPredicted RBP20.45■□□□□ 0.86
RAB6A-208ENST00000541795 hCG_1642624A0A1W2PR95 340 aa20.45■□□□□ 0.86
RAB6A-208ENST00000541795 KIF23Q02241 960 aaPredicted RBP20.45■□□□□ 0.86
RAB6A-208ENST00000541795 CSPP1Q1MSJ5 1256 aa20.45■□□□□ 0.86
RAB6A-208ENST00000541795 LZTS2Q9BRK4 669 aa20.45■□□□□ 0.86
RAB6A-208ENST00000541795 HACL1Q9UJ83 578 aa20.45■□□□□ 0.86
RAB6A-208ENST00000541795 TBC1D12O60347 775 aa20.44■□□□□ 0.86
RAB6A-208ENST00000541795 PDHBP11177 359 aa20.44■□□□□ 0.86
RAB6A-208ENST00000541795 SEPT2Q15019 361 aa20.44■□□□□ 0.86
RAB6A-208ENST00000541795 USP17L2Q6R6M4 530 aa20.44■□□□□ 0.86
RAB6A-208ENST00000541795 CABP5Q9NP86 173 aa20.44■□□□□ 0.86
RAB6A-208ENST00000541795 RBM27Q9P2N5 1060 aaKnown RBP20.44■□□□□ 0.86
RAB6A-208ENST00000541795 SCAF8Q9UPN6 1271 aaKnown RBP20.44■□□□□ 0.86
RAB6A-208ENST00000541795 GOLGA8HP0CJ92 632 aa20.43■□□□□ 0.86
RAB6A-208ENST00000541795 XBP1P17861 261 aa20.43■□□□□ 0.86
RAB6A-208ENST00000541795 ICA1Q05084 483 aa20.43■□□□□ 0.86
RAB6A-208ENST00000541795 RRP1BQ14684 758 aaKnown RBP20.43■□□□□ 0.86
RAB6A-208ENST00000541795 C9orf131Q5VYM1 1079 aa20.43■□□□□ 0.86
RAB6A-208ENST00000541795 BRAPQ7Z569 592 aa20.43■□□□□ 0.86
RAB6A-208ENST00000541795 NYAP2Q9P242 653 aa20.43■□□□□ 0.86
RAB6A-208ENST00000541795 DDX49Q9Y6V7 483 aaKnown RBP20.43■□□□□ 0.86
RAB6A-208ENST00000541795 USP17L5A8MUK1 530 aa20.43■□□□□ 0.86
RAB6A-208ENST00000541795 KIF28PB7ZC32 967 aa20.43■□□□□ 0.86
RAB6A-208ENST00000541795 KLRF2D3W0D1 207 aa20.43■□□□□ 0.86
RAB6A-208ENST00000541795 GH2P01242 217 aa20.43■□□□□ 0.86
RAB6A-208ENST00000541795 EEF2P13639 858 aaKnown RBP20.43■□□□□ 0.86
RAB6A-208ENST00000541795 TRPM4Q8TD43 1214 aa20.43■□□□□ 0.86
RAB6A-208ENST00000541795 MMP1P03956 469 aa20.42■□□□□ 0.86
RAB6A-208ENST00000541795 SNHG28P0DPA3 235 aa20.42■□□□□ 0.86
RAB6A-208ENST00000541795 GNL2Q13823 731 aaKnown RBP20.42■□□□□ 0.86
RAB6A-208ENST00000541795 SAFBQ15424 915 aaKnown RBP eCLIP20.42■□□□□ 0.86
RAB6A-208ENST00000541795 ASPRV1Q53RT3 343 aa20.42■□□□□ 0.86
RAB6A-208ENST00000541795 MIGA2Q7L4E1 593 aa20.42■□□□□ 0.86
RAB6A-208ENST00000541795 PIBF1Q8WXW3 757 aa20.42■□□□□ 0.86
RAB6A-208ENST00000541795 SCAND2PQ9GZW5 306 aaPredicted RBP20.42■□□□□ 0.86
RAB6A-208ENST00000541795 TFIP11Q9UBB9 837 aaKnown RBP20.42■□□□□ 0.86
RAB6A-208ENST00000541795 KCNJ14Q9UNX9 436 aa20.42■□□□□ 0.86
RAB6A-208ENST00000541795 DDNO94850 711 aaPredicted RBP20.41■□□□□ 0.86
RAB6A-208ENST00000541795 SCG2P13521 617 aa20.41■□□□□ 0.86
RAB6A-208ENST00000541795 EPS15P42566 896 aa20.41■□□□□ 0.86
RAB6A-208ENST00000541795 JAG1P78504 1218 aa20.41■□□□□ 0.86
RAB6A-208ENST00000541795 PFKFB3Q16875 520 aaPredicted RBP20.41■□□□□ 0.86
RAB6A-208ENST00000541795 KLHL40Q2TBA0 621 aa20.41■□□□□ 0.86
RAB6A-208ENST00000541795 MKL1Q969V6 931 aa20.41■□□□□ 0.86
RAB6A-208ENST00000541795 TEPSINQ96N21 525 aa20.41■□□□□ 0.86
RAB6A-208ENST00000541795 ZNF396Q96N95 335 aaPredicted RBP20.41■□□□□ 0.86
RAB6A-208ENST00000541795 SPZ1Q9BXG8 430 aa20.41■□□□□ 0.86
RAB6A-208ENST00000541795 VPS54Q9P1Q0 977 aa20.41■□□□□ 0.86
RAB6A-208ENST00000541795 CFAP45Q9UL16 551 aa20.41■□□□□ 0.86
RAB6A-208ENST00000541795 CYTH3O43739 400 aa20.41■□□□□ 0.86
RAB6A-208ENST00000541795 MAP3K10Q02779 954 aa20.41■□□□□ 0.86
RAB6A-208ENST00000541795 SLC35G1Q2M3R5 365 aa20.41■□□□□ 0.86
RAB6A-208ENST00000541795 ATL3Q6DD88 541 aa20.41■□□□□ 0.86
RAB6A-208ENST00000541795 FRMPD2Q68DX3 1309 aaPredicted RBP20.4■□□□□ 0.86
RAB6A-208ENST00000541795 GPR162Q16538 588 aa20.4■□□□□ 0.86
RAB6A-208ENST00000541795 ANGEL2Q5VTE6 544 aaKnown RBP20.4■□□□□ 0.86
RAB6A-208ENST00000541795 APOBEC3FQ8IUX4 373 aaKnown RBP20.4■□□□□ 0.86
RAB6A-208ENST00000541795 DEFB129Q9H1M3 183 aa20.4■□□□□ 0.86
RAB6A-208ENST00000541795 ATAD5Q96QE3 1844 aa20.4■□□□□ 0.86
RAB6A-208ENST00000541795 U2AF2P26368 475 aaKnown RBP eCLIP20.39■□□□□ 0.864e-9■□□□□ 9.3
RAB6A-208ENST00000541795 SMARCA1P28370 1054 aa20.39■□□□□ 0.86
RAB6A-208ENST00000541795 LMOD1P29536 600 aaPredicted RBP20.39■□□□□ 0.86
RAB6A-208ENST00000541795 SIAH1Q8IUQ4 282 aa20.39■□□□□ 0.86
RAB6A-208ENST00000541795 DIS3L2Q8IYB7 885 aaKnown RBP20.39■□□□□ 0.86
RAB6A-208ENST00000541795 GPT2Q8TD30 523 aa20.39■□□□□ 0.86
RAB6A-208ENST00000541795 SHISA4Q96DD7 197 aa20.39■□□□□ 0.86
RAB6A-208ENST00000541795 SPATA32Q96LK8 384 aa20.39■□□□□ 0.86
RAB6A-208ENST00000541795 ZBTB21Q9ULJ3 1066 aa20.39■□□□□ 0.86
RAB6A-208ENST00000541795 ELP1O95163 1332 aa20.39■□□□□ 0.85
RAB6A-208ENST00000541795 GADD45BO75293 160 aaPredicted RBP20.39■□□□□ 0.85
RAB6A-208ENST00000541795 MBD3O95983 291 aa20.39■□□□□ 0.85
RAB6A-208ENST00000541795 ZNF543Q08ER8 600 aa20.39■□□□□ 0.85
RAB6A-208ENST00000541795 MYSM1Q5VVJ2 828 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms