RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 MOV10L1Q9BXT6 1211 aaKnown RBP32.53■■■□□ 2.8
CHFR-218ENST00000540963 SLC5A4Q9NY91 659 aa32.53■■■□□ 2.8
CHFR-218ENST00000540963 MAGEB6P1A0A0J9YX57 407 aa32.52■■■□□ 2.8
CHFR-218ENST00000540963 ADORA2AP29274 412 aa32.52■■■□□ 2.8
CHFR-218ENST00000540963 CRNKL1Q9BZJ0 848 aaKnown RBP32.52■■■□□ 2.8
CHFR-218ENST00000540963 SPATC1LQ9H0A9 340 aa32.52■■■□□ 2.8
CHFR-218ENST00000540963 ABRAQ8N0Z2 381 aa32.51■■■□□ 2.79
CHFR-218ENST00000540963 GUCD1Q96NT3 240 aa32.51■■■□□ 2.79
CHFR-218ENST00000540963 KBTBD13C9JR72 458 aa32.5■■■□□ 2.79
CHFR-218ENST00000540963 SEPT4O43236 478 aa32.5■■■□□ 2.79
CHFR-218ENST00000540963 AACSQ86V21 672 aa32.5■■■□□ 2.79
CHFR-218ENST00000540963 ITPRIPQ8IWB1 547 aa32.5■■■□□ 2.79
CHFR-218ENST00000540963 A0A1W2PRG0 241 aa32.49■■■□□ 2.79
CHFR-218ENST00000540963 SNX17Q15036 470 aa32.49■■■□□ 2.79
CHFR-218ENST00000540963 SLC39A5Q6ZMH5 540 aa32.49■■■□□ 2.79
CHFR-218ENST00000540963 TMEM179Q6ZVK1 233 aa32.49■■■□□ 2.79
CHFR-218ENST00000540963 PHF6Q8IWS0 365 aaKnown RBP eCLIP32.49■■■□□ 2.79
CHFR-218ENST00000540963 TANGO6Q9C0B7 1094 aa32.49■■■□□ 2.79
CHFR-218ENST00000540963 MROH8Q9H579 483 aa32.49■■■□□ 2.79
CHFR-218ENST00000540963 MYH8P13535 1937 aa32.49■■■□□ 2.79
CHFR-218ENST00000540963 ERCC3P19447 782 aa32.48■■■□□ 2.79
CHFR-218ENST00000540963 GJC2Q5T442 439 aaPredicted RBP32.48■■■□□ 2.79
CHFR-218ENST00000540963 ZNF697Q5TEC3 545 aa32.48■■■□□ 2.79
CHFR-218ENST00000540963 CEP85Q6P2H3 762 aa32.48■■■□□ 2.79
CHFR-218ENST00000540963 MCM9Q9NXL9 1143 aa32.48■■■□□ 2.79
CHFR-218ENST00000540963 SWAP70Q9UH65 585 aa32.48■■■□□ 2.79
CHFR-218ENST00000540963 HSP90AB4PQ58FF6 505 aa32.47■■■□□ 2.79
CHFR-218ENST00000540963 SLC9C2Q5TAH2 1124 aa32.47■■■□□ 2.79
CHFR-218ENST00000540963 C1orf53Q5VUE5 145 aa32.47■■■□□ 2.79
CHFR-218ENST00000540963 ATP11BQ9Y2G3 1177 aa32.47■■■□□ 2.79
CHFR-218ENST00000540963 MPHOSPH10O00566 681 aaKnown RBP32.46■■■□□ 2.79
CHFR-218ENST00000540963 ZNFX1Q9P2E3 1918 aaKnown RBP32.45■■■□□ 2.79
CHFR-218ENST00000540963 PDE6AP16499 860 aa32.45■■■□□ 2.79
CHFR-218ENST00000540963 DSG3P32926 999 aa32.45■■■□□ 2.79
CHFR-218ENST00000540963 MIER1Q8N108 512 aa32.45■■■□□ 2.79
CHFR-218ENST00000540963 PPIL4Q8WUA2 492 aaKnown RBP eCLIP32.45■■■□□ 2.79
CHFR-218ENST00000540963 COL25A1Q9BXS0 654 aaPredicted RBP32.45■■■□□ 2.79
CHFR-218ENST00000540963 SH2D4AQ9H788 454 aa32.45■■■□□ 2.79
CHFR-218ENST00000540963 PARP14Q460N5 1801 aa32.44■■■□□ 2.78
CHFR-218ENST00000540963 COBLO75128 1261 aa32.44■■■□□ 2.78
CHFR-218ENST00000540963 DCP1AQ9NPI6 582 aaPredicted RBP32.44■■■□□ 2.78
CHFR-218ENST00000540963 NRBP1Q9UHY1 535 aa32.44■■■□□ 2.78
CHFR-218ENST00000540963 EXOC6BQ9Y2D4 811 aa32.44■■■□□ 2.78
CHFR-218ENST00000540963 RLBP1P12271 317 aa32.43■■■□□ 2.78
CHFR-218ENST00000540963 ARHGEF10LQ9HCE6 1279 aa32.43■■■□□ 2.78
CHFR-218ENST00000540963 TMX2Q9Y320 296 aa32.43■■■□□ 2.78
CHFR-218ENST00000540963 SHHQ15465 462 aa32.41■■■□□ 2.78
CHFR-218ENST00000540963 MAML3Q96JK9 1138 aa32.41■■■□□ 2.78
CHFR-218ENST00000540963 ZNF532Q9HCE3 1301 aa32.41■■■□□ 2.78
CHFR-218ENST00000540963 TCRBV5S4A2TA0A5A2 114 aa32.4■■■□□ 2.78
CHFR-218ENST00000540963 FLOT1O75955 427 aa32.4■■■□□ 2.78
CHFR-218ENST00000540963 SLC25A27O95847 323 aa32.4■■■□□ 2.78
CHFR-218ENST00000540963 FCER1AP12319 257 aa32.4■■■□□ 2.78
CHFR-218ENST00000540963 LRRC41Q15345 812 aa32.4■■■□□ 2.78
CHFR-218ENST00000540963 NCAPG2Q86XI2 1143 aa32.4■■■□□ 2.78
CHFR-218ENST00000540963 CCDC17Q96LX7 622 aa32.4■■■□□ 2.78
CHFR-218ENST00000540963 FAM161BQ96MY7 647 aa32.4■■■□□ 2.78
CHFR-218ENST00000540963 SMCHD1A6NHR9 2005 aa32.39■■■□□ 2.78
CHFR-218ENST00000540963 WDR46O15213 610 aaKnown RBP32.39■■■□□ 2.78
CHFR-218ENST00000540963 SMAD3P84022 425 aaKnown RBP32.39■■■□□ 2.78
CHFR-218ENST00000540963 PLS1Q14651 629 aa32.39■■■□□ 2.78
CHFR-218ENST00000540963 TRIM60Q495X7 471 aa32.39■■■□□ 2.78
CHFR-218ENST00000540963 KIAA1755Q5JYT7 1200 aa32.39■■■□□ 2.78
CHFR-218ENST00000540963 RHPN1Q8TCX5 695 aa32.39■■■□□ 2.78
CHFR-218ENST00000540963 SDR42E1Q8WUS8 393 aa32.39■■■□□ 2.78
CHFR-218ENST00000540963 VCPKMTQ9H867 229 aa32.39■■■□□ 2.78
CHFR-218ENST00000540963 PRDM5Q9NQX1 630 aaPredicted RBP32.39■■■□□ 2.78
CHFR-218ENST00000540963 PDLIM7Q9NR12 457 aa32.39■■■□□ 2.78
CHFR-218ENST00000540963 ADCYAP1R1P41586 468 aa32.38■■■□□ 2.77
CHFR-218ENST00000540963 EVX2Q03828 476 aa32.38■■■□□ 2.77
CHFR-218ENST00000540963 ANO1Q5XXA6 986 aa32.38■■■□□ 2.77
CHFR-218ENST00000540963 SIAH1Q8IUQ4 282 aa32.38■■■□□ 2.77
CHFR-218ENST00000540963 CLASRPQ8N2M8 674 aaKnown RBP32.38■■■□□ 2.77
CHFR-218ENST00000540963 ATP8A2Q9NTI2 1148 aa32.38■■■□□ 2.77
CHFR-218ENST00000540963 ICA1Q05084 483 aa32.37■■■□□ 2.77
CHFR-218ENST00000540963 LCORLQ8N3X6 602 aa32.37■■■□□ 2.77
CHFR-218ENST00000540963 SLC44A5Q8NCS7 719 aa32.37■■■□□ 2.77
CHFR-218ENST00000540963 BADQ92934 168 aa32.37■■■□□ 2.77
CHFR-218ENST00000540963 ATG4CQ96DT6 458 aa32.37■■■□□ 2.77
CHFR-218ENST00000540963 CDX2Q99626 313 aaPredicted RBP32.37■■■□□ 2.77
CHFR-218ENST00000540963 SEMA6BQ9H3T3 888 aa32.37■■■□□ 2.77
CHFR-218ENST00000540963 IL1RAPL2Q9NP60 686 aa32.37■■■□□ 2.77
CHFR-218ENST00000540963 ADAMTS5Q9UNA0 930 aa32.37■■■□□ 2.77
CHFR-218ENST00000540963 COL11A1P12107 1806 aaPredicted RBP32.36■■■□□ 2.77
CHFR-218ENST00000540963 PRAMEF19Q5SWL8 479 aa32.36■■■□□ 2.77
CHFR-218ENST00000540963 C9orf50Q5SZB4 431 aa32.36■■■□□ 2.77
CHFR-218ENST00000540963 PHF24Q9UPV7 400 aa32.36■■■□□ 2.77
CHFR-218ENST00000540963 DIS3Q9Y2L1 958 aaKnown RBP32.36■■■□□ 2.77
CHFR-218ENST00000540963 PLXNA1Q9UIW2 1896 aa32.35■■■□□ 2.77
CHFR-218ENST00000540963 ROBO3Q96MS0 1386 aa32.35■■■□□ 2.77
CHFR-218ENST00000540963 GOLIM4O00461 696 aa32.35■■■□□ 2.77
CHFR-218ENST00000540963 FAM47AQ5JRC9 791 aa32.35■■■□□ 2.77
CHFR-218ENST00000540963 KIF1BPQ96EK5 621 aa32.35■■■□□ 2.77
CHFR-218ENST00000540963 TACC3Q9Y6A5 838 aa32.35■■■□□ 2.77
CHFR-218ENST00000540963 BAZ2AQ9UIF9 1905 aaKnown RBP32.35■■■□□ 2.77
CHFR-218ENST00000540963 MYCNP04198 464 aaPredicted RBP32.34■■■□□ 2.77
CHFR-218ENST00000540963 CYP2D6P10635 497 aa32.34■■■□□ 2.77
CHFR-218ENST00000540963 RARBP10826 455 aa32.34■■■□□ 2.77
CHFR-218ENST00000540963 TMEM132BQ14DG7 1078 aa32.34■■■□□ 2.77
CHFR-218ENST00000540963 SPICE1Q8N0Z3 855 aa32.34■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms