RNA–Protein interactions for RNA: ENST00000540728.6

CACNA2D4-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2

Gene CACNA2D4, Length 596 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-211ENST00000540728 CHD1LQ86WJ1 897 aa20.48■□□□□ 0.87
CACNA2D4-211ENST00000540728 STK11IPQ8N1F8 1099 aa20.48■□□□□ 0.87
CACNA2D4-211ENST00000540728 LPAR1Q92633 364 aa20.48■□□□□ 0.87
CACNA2D4-211ENST00000540728 EPB41L4AQ9HCS5 686 aaPredicted RBP20.48■□□□□ 0.87
CACNA2D4-211ENST00000540728 TMX2Q9Y320 296 aa20.48■□□□□ 0.87
CACNA2D4-211ENST00000540728 GJB1P08034 283 aa20.47■□□□□ 0.87
CACNA2D4-211ENST00000540728 SLC3A2P08195 630 aaKnown RBP20.47■□□□□ 0.87
CACNA2D4-211ENST00000540728 TICAM2Q86XR7 235 aa20.47■□□□□ 0.87
CACNA2D4-211ENST00000540728 TANGO6Q9C0B7 1094 aa20.47■□□□□ 0.87
CACNA2D4-211ENST00000540728 NAPBQ9H115 298 aa20.47■□□□□ 0.87
CACNA2D4-211ENST00000540728 HOXC10Q9NYD6 342 aa20.47■□□□□ 0.87
CACNA2D4-211ENST00000540728 ROBO3Q96MS0 1386 aa20.46■□□□□ 0.87
CACNA2D4-211ENST00000540728 TRIM6-TRIM34B2RNG4 842 aa20.46■□□□□ 0.87
CACNA2D4-211ENST00000540728 GJA8P48165 433 aa20.46■□□□□ 0.87
CACNA2D4-211ENST00000540728 NUCB1Q02818 461 aa20.46■□□□□ 0.87
CACNA2D4-211ENST00000540728 COG2Q14746 738 aa20.46■□□□□ 0.87
CACNA2D4-211ENST00000540728 Q3C1V9 767 aa20.46■□□□□ 0.87
CACNA2D4-211ENST00000540728 LBX2Q6XYB7 198 aa20.46■□□□□ 0.87
CACNA2D4-211ENST00000540728 CLEC10AQ8IUN9 316 aa20.46■□□□□ 0.87
CACNA2D4-211ENST00000540728 ZNF444Q8N0Y2 327 aaPredicted RBP20.46■□□□□ 0.87
CACNA2D4-211ENST00000540728 U2AF1L4Q8WU68 220 aaKnown RBP20.46■□□□□ 0.87
CACNA2D4-211ENST00000540728 NUDT12Q9BQG2 462 aa20.46■□□□□ 0.87
CACNA2D4-211ENST00000540728 VCPKMTQ9H867 229 aa20.46■□□□□ 0.87
CACNA2D4-211ENST00000540728 HMGCRP04035 888 aa20.45■□□□□ 0.86
CACNA2D4-211ENST00000540728 EEF2P13639 858 aaKnown RBP20.45■□□□□ 0.86
CACNA2D4-211ENST00000540728 RASA1P20936 1047 aa20.45■□□□□ 0.86
CACNA2D4-211ENST00000540728 SIAH1Q8IUQ4 282 aa20.45■□□□□ 0.86
CACNA2D4-211ENST00000540728 SOCS4Q8WXH5 440 aa20.45■□□□□ 0.86
CACNA2D4-211ENST00000540728 GOPCQ9HD26 462 aa20.45■□□□□ 0.86
CACNA2D4-211ENST00000540728 HELLSQ9NRZ9 838 aa20.45■□□□□ 0.86
CACNA2D4-211ENST00000540728 GJD2Q9UKL4 321 aa20.45■□□□□ 0.86
CACNA2D4-211ENST00000540728 PLXNB2O15031 1838 aa20.44■□□□□ 0.86
CACNA2D4-211ENST00000540728 SPDYE16A6NNV3 312 aaPredicted RBP20.44■□□□□ 0.86
CACNA2D4-211ENST00000540728 PDE4BQ07343 736 aa20.44■□□□□ 0.86
CACNA2D4-211ENST00000540728 PLEKHH3Q7Z736 793 aa20.44■□□□□ 0.86
CACNA2D4-211ENST00000540728 SPICE1Q8N0Z3 855 aa20.44■□□□□ 0.86
CACNA2D4-211ENST00000540728 WDR46O15213 610 aaKnown RBP20.43■□□□□ 0.86
CACNA2D4-211ENST00000540728 RAD21O60216 631 aa20.43■□□□□ 0.86
CACNA2D4-211ENST00000540728 FARP2O94887 1054 aaPredicted RBP20.43■□□□□ 0.86
CACNA2D4-211ENST00000540728 WDR78Q5VTH9 848 aa20.43■□□□□ 0.86
CACNA2D4-211ENST00000540728 CCDC129Q6ZRS4 1044 aa20.43■□□□□ 0.86
CACNA2D4-211ENST00000540728 GPR142Q7Z601 462 aa20.43■□□□□ 0.86
CACNA2D4-211ENST00000540728 RILPL2Q969X0 211 aa20.43■□□□□ 0.86
CACNA2D4-211ENST00000540728 DEFB118Q96PH6 123 aa20.43■□□□□ 0.86
CACNA2D4-211ENST00000540728 PORCNQ9H237 461 aa20.43■□□□□ 0.86
CACNA2D4-211ENST00000540728 CEP290O15078 2479 aa20.42■□□□□ 0.86
CACNA2D4-211ENST00000540728 CNMDO75829 334 aa20.42■□□□□ 0.86
CACNA2D4-211ENST00000540728 FLOT1O75955 427 aa20.42■□□□□ 0.86
CACNA2D4-211ENST00000540728 CYP2B6P20813 491 aa20.42■□□□□ 0.86
CACNA2D4-211ENST00000540728 PPARAQ07869 468 aa20.42■□□□□ 0.86
CACNA2D4-211ENST00000540728 KIAA1755Q5JYT7 1200 aa20.42■□□□□ 0.86
CACNA2D4-211ENST00000540728 POTEEQ6S8J3 1075 aa20.42■□□□□ 0.86
CACNA2D4-211ENST00000540728 PLEKHM2Q8IWE5 1019 aa20.42■□□□□ 0.86
CACNA2D4-211ENST00000540728 MB21D1Q8N884 522 aa20.42■□□□□ 0.86
CACNA2D4-211ENST00000540728 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.42■□□□□ 0.86
CACNA2D4-211ENST00000540728 OSBPL3Q9H4L5 887 aa20.42■□□□□ 0.86
CACNA2D4-211ENST00000540728 IVNS1ABPQ9Y6Y0 642 aa20.42■□□□□ 0.86
CACNA2D4-211ENST00000540728 PRDM1O75626 825 aa20.41■□□□□ 0.86
CACNA2D4-211ENST00000540728 XRCC5P13010 732 aaKnown RBP20.41■□□□□ 0.86
CACNA2D4-211ENST00000540728 DSG3P32926 999 aa20.41■□□□□ 0.86
CACNA2D4-211ENST00000540728 RGS2P41220 211 aa20.41■□□□□ 0.86
CACNA2D4-211ENST00000540728 MCMDC2Q4G0Z9 681 aa20.41■□□□□ 0.86
CACNA2D4-211ENST00000540728 TRMT44Q8IYL2 757 aaKnown RBP20.41■□□□□ 0.86
CACNA2D4-211ENST00000540728 TRIB2Q92519 343 aa20.41■□□□□ 0.86
CACNA2D4-211ENST00000540728 BTBD7Q9P203 1132 aa20.41■□□□□ 0.86
CACNA2D4-211ENST00000540728 NYAP2Q9P242 653 aa20.41■□□□□ 0.86
CACNA2D4-211ENST00000540728 SGPL1O95470 568 aa20.4■□□□□ 0.86
CACNA2D4-211ENST00000540728 TFRCP02786 760 aaKnown RBP20.4■□□□□ 0.86
CACNA2D4-211ENST00000540728 ZKSCAN1P17029 563 aaPredicted RBP20.4■□□□□ 0.86
CACNA2D4-211ENST00000540728 CAPN2P17655 700 aa20.4■□□□□ 0.86
CACNA2D4-211ENST00000540728 IRX6P78412 446 aaPredicted RBP20.4■□□□□ 0.86
CACNA2D4-211ENST00000540728 SAMD1Q6SPF0 538 aaPredicted RBP20.4■□□□□ 0.86
CACNA2D4-211ENST00000540728 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.4■□□□□ 0.86
CACNA2D4-211ENST00000540728 SLC34A2O95436 690 aa20.39■□□□□ 0.85
CACNA2D4-211ENST00000540728 TSPY3P0CV98 308 aa20.39■□□□□ 0.85
CACNA2D4-211ENST00000540728 TSPY8P0CW00 308 aa20.39■□□□□ 0.85
CACNA2D4-211ENST00000540728 TRIM32Q13049 653 aa20.39■□□□□ 0.85
CACNA2D4-211ENST00000540728 MORN1Q5T089 497 aa20.39■□□□□ 0.85
CACNA2D4-211ENST00000540728 DPF3Q92784 378 aa20.39■□□□□ 0.85
CACNA2D4-211ENST00000540728 FAM227BQ96M60 508 aa20.39■□□□□ 0.85
CACNA2D4-211ENST00000540728 APBA2Q99767 749 aa20.39■□□□□ 0.85
CACNA2D4-211ENST00000540728 HTATIP2Q9BUP3 242 aa20.39■□□□□ 0.85
CACNA2D4-211ENST00000540728 PAK6Q9NQU5 681 aaPredicted RBP20.39■□□□□ 0.85
CACNA2D4-211ENST00000540728 CLIP2Q9UDT6 1046 aa20.39■□□□□ 0.85
CACNA2D4-211ENST00000540728 GREB1LQ9C091 1923 aaPredicted RBP20.39■□□□□ 0.85
CACNA2D4-211ENST00000540728 A0A0G2JMZ2 1700 aa20.39■□□□□ 0.85
CACNA2D4-211ENST00000540728 SLC15A5A6NIM6 579 aa20.38■□□□□ 0.85
CACNA2D4-211ENST00000540728 MFAP1P55081 439 aaKnown RBP20.38■□□□□ 0.85
CACNA2D4-211ENST00000540728 MAP2K5Q13163 448 aa20.38■□□□□ 0.85
CACNA2D4-211ENST00000540728 NMIQ13287 307 aaPredicted RBP20.38■□□□□ 0.85
CACNA2D4-211ENST00000540728 PLS1Q14651 629 aa20.38■□□□□ 0.85
CACNA2D4-211ENST00000540728 ALX1Q15699 326 aa20.38■□□□□ 0.85
CACNA2D4-211ENST00000540728 SPATC1LQ9H0A9 340 aa20.38■□□□□ 0.85
CACNA2D4-211ENST00000540728 HMX1Q9NP08 348 aaPredicted RBP20.38■□□□□ 0.85
CACNA2D4-211ENST00000540728 RPTORQ8N122 1335 aa20.37■□□□□ 0.85
CACNA2D4-211ENST00000540728 A0A0D9SFI3 127 aa20.37■□□□□ 0.85
CACNA2D4-211ENST00000540728 PRKAR2AP13861 404 aaKnown RBP20.37■□□□□ 0.85
CACNA2D4-211ENST00000540728 PTPREP23469 700 aa20.37■□□□□ 0.85
CACNA2D4-211ENST00000540728 TFAP4Q01664 338 aa20.37■□□□□ 0.85
CACNA2D4-211ENST00000540728 PPP4R3BQ5MIZ7 849 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms