RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 LOC285556D6RIA3 1793 aa13.71□□□□□ -0.22
TMEM258-205ENST00000540434 FRMPD3Q5JV73 1810 aa13.7□□□□□ -0.22
TMEM258-205ENST00000540434 A0A0D9SFI3 127 aa13.7□□□□□ -0.22
TMEM258-205ENST00000540434 GPAA1O43292 621 aa13.7□□□□□ -0.22
TMEM258-205ENST00000540434 PEX10O60683 326 aa13.7□□□□□ -0.22
TMEM258-205ENST00000540434 CTNND1O60716 968 aaKnown RBP13.7□□□□□ -0.22
TMEM258-205ENST00000540434 GDF11O95390 407 aa13.7□□□□□ -0.22
TMEM258-205ENST00000540434 PRKAR2AP13861 404 aaKnown RBP13.7□□□□□ -0.22
TMEM258-205ENST00000540434 CYP2B6P20813 491 aa13.7□□□□□ -0.22
TMEM258-205ENST00000540434 CCND3P30281 292 aaPredicted RBP13.7□□□□□ -0.22
TMEM258-205ENST00000540434 SHMT1P34896 483 aa13.7□□□□□ -0.22
TMEM258-205ENST00000540434 CAP2P40123 477 aa13.7□□□□□ -0.22
TMEM258-205ENST00000540434 ATN1P54259 1190 aaPredicted RBP13.7□□□□□ -0.22
TMEM258-205ENST00000540434 ZSCAN25Q6NSZ9 544 aa13.7□□□□□ -0.22
TMEM258-205ENST00000540434 CTR9Q6PD62 1173 aa13.7□□□□□ -0.22
TMEM258-205ENST00000540434 FOXP4Q8IVH2 680 aaPredicted RBP13.7□□□□□ -0.22
TMEM258-205ENST00000540434 EVI5LQ96CN4 794 aa13.7□□□□□ -0.22
TMEM258-205ENST00000540434 PICK1Q9NRD5 415 aa13.7□□□□□ -0.22
TMEM258-205ENST00000540434 MCM9Q9NXL9 1143 aa13.7□□□□□ -0.22
TMEM258-205ENST00000540434 USP17L12C9JPN9 530 aa13.69□□□□□ -0.22
TMEM258-205ENST00000540434 USP17L21D6R901 530 aa13.69□□□□□ -0.22
TMEM258-205ENST00000540434 GRIN2CQ14957 1233 aa13.69□□□□□ -0.22
TMEM258-205ENST00000540434 VPS53Q5VIR6 699 aa13.69□□□□□ -0.22
TMEM258-205ENST00000540434 LHX8Q68G74 356 aa13.69□□□□□ -0.22
TMEM258-205ENST00000540434 TATDN1Q6P1N9 297 aa13.69□□□□□ -0.22
TMEM258-205ENST00000540434 RILPL2Q969X0 211 aa13.69□□□□□ -0.22
TMEM258-205ENST00000540434 SENP6Q9GZR1 1112 aaPredicted RBP13.69□□□□□ -0.22
TMEM258-205ENST00000540434 IL25Q9H293 177 aa13.69□□□□□ -0.22
TMEM258-205ENST00000540434 HERC5Q9UII4 1024 aaKnown RBP13.69□□□□□ -0.22
TMEM258-205ENST00000540434 TRIM75PA6NK02 468 aa13.68□□□□□ -0.22
TMEM258-205ENST00000540434 TRIM6-TRIM34B2RNG4 842 aa13.68□□□□□ -0.22
TMEM258-205ENST00000540434 POLR3DP05423 398 aaPredicted RBP13.68□□□□□ -0.22
TMEM258-205ENST00000540434 GUCY1A2P33402 732 aa13.68□□□□□ -0.22
TMEM258-205ENST00000540434 CACNB2Q08289 660 aaPredicted RBP13.68□□□□□ -0.22
TMEM258-205ENST00000540434 NMIQ13287 307 aaPredicted RBP13.68□□□□□ -0.22
TMEM258-205ENST00000540434 C12orf60Q5U649 245 aa13.68□□□□□ -0.22
TMEM258-205ENST00000540434 ADAMTS19Q8TE59 1207 aa13.68□□□□□ -0.22
TMEM258-205ENST00000540434 ATP8A2Q9NTI2 1148 aa13.68□□□□□ -0.22
TMEM258-205ENST00000540434 SERPINB13Q9UIV8 391 aa13.68□□□□□ -0.22
TMEM258-205ENST00000540434 TACC3Q9Y6A5 838 aa13.68□□□□□ -0.22
TMEM258-205ENST00000540434 LTBP2Q14767 1821 aa13.68□□□□□ -0.22
TMEM258-205ENST00000540434 ZFYP08048 801 aaPredicted RBP13.67□□□□□ -0.22
TMEM258-205ENST00000540434 SDSP20132 328 aa13.67□□□□□ -0.22
TMEM258-205ENST00000540434 GCLCP48506 637 aaPredicted RBP13.67□□□□□ -0.22
TMEM258-205ENST00000540434 TTC22Q5TAA0 569 aa13.67□□□□□ -0.22
TMEM258-205ENST00000540434 ZNF589Q86UQ0 364 aaPredicted RBP13.67□□□□□ -0.22
TMEM258-205ENST00000540434 CERS3Q8IU89 383 aa13.67□□□□□ -0.22
TMEM258-205ENST00000540434 STK11IPQ8N1F8 1099 aa13.67□□□□□ -0.22
TMEM258-205ENST00000540434 CRACR2BQ8N4Y2 399 aaPredicted RBP13.67□□□□□ -0.22
TMEM258-205ENST00000540434 NECAB3Q96P71 396 aaPredicted RBP13.67□□□□□ -0.22
TMEM258-205ENST00000540434 EHD4Q9H223 541 aa13.67□□□□□ -0.22
TMEM258-205ENST00000540434 HLA-DOAP06340 250 aa13.66□□□□□ -0.22
TMEM258-205ENST00000540434 SMAD3P84022 425 aaKnown RBP13.66□□□□□ -0.22
TMEM258-205ENST00000540434 CCL14Q16627 93 aa13.66□□□□□ -0.22
TMEM258-205ENST00000540434 TTC6Q86TZ1 520 aa13.66□□□□□ -0.22
TMEM258-205ENST00000540434 IFNL3Q8IZI9 196 aa13.66□□□□□ -0.22
TMEM258-205ENST00000540434 BADQ92934 168 aa13.66□□□□□ -0.22
TMEM258-205ENST00000540434 UHRF1Q96T88 793 aaPredicted RBP13.66□□□□□ -0.22
TMEM258-205ENST00000540434 INCENPQ9NQS7 918 aa13.66□□□□□ -0.22
TMEM258-205ENST00000540434 PNMA3Q9UL41 463 aa13.66□□□□□ -0.22
TMEM258-205ENST00000540434 PATL2C9JE40 543 aaKnown RBP13.65□□□□□ -0.22
TMEM258-205ENST00000540434 GH2P01242 217 aa13.65□□□□□ -0.22
TMEM258-205ENST00000540434 SPP2Q13103 211 aa13.65□□□□□ -0.22
TMEM258-205ENST00000540434 CLEC10AQ8IUN9 316 aa13.65□□□□□ -0.22
TMEM258-205ENST00000540434 SIAH1Q8IUQ4 282 aa13.65□□□□□ -0.22
TMEM258-205ENST00000540434 PROCA1Q8NCQ7 364 aaPredicted RBP13.65□□□□□ -0.22
TMEM258-205ENST00000540434 MORF4L1Q9UBU8 362 aa13.65□□□□□ -0.22
TMEM258-205ENST00000540434 ZBTB21Q9ULJ3 1066 aa13.65□□□□□ -0.22
TMEM258-205ENST00000540434 BDP1A6H8Y1 2624 aa13.65□□□□□ -0.22
TMEM258-205ENST00000540434 MINDY4BA8MYZ0 360 aa13.64□□□□□ -0.23
TMEM258-205ENST00000540434 XRCC5P13010 732 aaKnown RBP13.64□□□□□ -0.23
TMEM258-205ENST00000540434 AKR1B1P15121 316 aa13.64□□□□□ -0.23
TMEM258-205ENST00000540434 CDK8P49336 464 aa13.64□□□□□ -0.23
TMEM258-205ENST00000540434 RTP1P59025 263 aa13.64□□□□□ -0.23
TMEM258-205ENST00000540434 CERKLQ49MI3 558 aaPredicted RBP13.64□□□□□ -0.23
TMEM258-205ENST00000540434 SBK1Q52WX2 424 aa13.64□□□□□ -0.23
TMEM258-205ENST00000540434 ACER1Q8TDN7 264 aa13.64□□□□□ -0.23
TMEM258-205ENST00000540434 USP6NLQ92738 828 aa13.64□□□□□ -0.23
TMEM258-205ENST00000540434 ASB2Q96Q27 587 aa13.64□□□□□ -0.23
TMEM258-205ENST00000540434 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.64□□□□□ -0.23
TMEM258-205ENST00000540434 ASCC2Q9H1I8 757 aaPredicted RBP13.64□□□□□ -0.23
TMEM258-205ENST00000540434 PRDM5Q9NQX1 630 aaPredicted RBP13.64□□□□□ -0.23
TMEM258-205ENST00000540434 HELLSQ9NRZ9 838 aa13.64□□□□□ -0.23
TMEM258-205ENST00000540434 PRKAG2Q9UGJ0 569 aa13.64□□□□□ -0.23
TMEM258-205ENST00000540434 ATP11BQ9Y2G3 1177 aa13.64□□□□□ -0.23
TMEM258-205ENST00000540434 RLFQ13129 1914 aa13.64□□□□□ -0.23
TMEM258-205ENST00000540434 SYNGAP1Q96PV0 1343 aa13.64□□□□□ -0.23
TMEM258-205ENST00000540434 USP17L5A8MUK1 530 aa13.63□□□□□ -0.23
TMEM258-205ENST00000540434 APPP05067 770 aa13.63□□□□□ -0.23
TMEM258-205ENST00000540434 SEPT2Q15019 361 aa13.63□□□□□ -0.23
TMEM258-205ENST00000540434 MCMDC2Q4G0Z9 681 aa13.63□□□□□ -0.23
TMEM258-205ENST00000540434 POTEEQ6S8J3 1075 aa13.63□□□□□ -0.23
TMEM258-205ENST00000540434 CWC27Q6UX04 472 aaKnown RBP13.63□□□□□ -0.23
TMEM258-205ENST00000540434 C16orf86Q6ZW13 317 aa13.63□□□□□ -0.23
TMEM258-205ENST00000540434 CENPQQ7L2Z9 268 aaPredicted RBP13.63□□□□□ -0.23
TMEM258-205ENST00000540434 SH3RF1Q7Z6J0 888 aa13.63□□□□□ -0.23
TMEM258-205ENST00000540434 ALYREFQ86V81 257 aaKnown RBP13.63□□□□□ -0.23
TMEM258-205ENST00000540434 A0A1W2PRG0 241 aa13.62□□□□□ -0.23
TMEM258-205ENST00000540434 HMGCS2P54868 508 aa13.62□□□□□ -0.23
TMEM258-205ENST00000540434 CCDC85BQ15834 202 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms