RNA–Protein interactions for RNA: ENST00000540209.5

RAP1B-221, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAP1B, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-221ENST00000540209 LPAR1Q92633 364 aa23.19■■□□□ 1.3
RAP1B-221ENST00000540209 RNF208Q9H0X6 261 aa23.19■■□□□ 1.3
RAP1B-221ENST00000540209 UNC93B1Q9H1C4 597 aa23.19■■□□□ 1.3
RAP1B-221ENST00000540209 SH2D4AQ9H788 454 aa23.19■■□□□ 1.3
RAP1B-221ENST00000540209 MINDY4BA8MYZ0 360 aa23.18■■□□□ 1.3
RAP1B-221ENST00000540209 RASA1P20936 1047 aa23.18■■□□□ 1.3
RAP1B-221ENST00000540209 GJA8P48165 433 aa23.18■■□□□ 1.3
RAP1B-221ENST00000540209 TDO2P48775 406 aa23.18■■□□□ 1.3
RAP1B-221ENST00000540209 IFNL3Q8IZI9 196 aa23.18■■□□□ 1.3
RAP1B-221ENST00000540209 NKX2-3Q8TAU0 364 aa23.18■■□□□ 1.3
RAP1B-221ENST00000540209 EVI5LQ96CN4 794 aa23.18■■□□□ 1.3
RAP1B-221ENST00000540209 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.18■■□□□ 1.3
RAP1B-221ENST00000540209 LNPKQ9C0E8 428 aa23.18■■□□□ 1.3
RAP1B-221ENST00000540209 VCPKMTQ9H867 229 aa23.18■■□□□ 1.3
RAP1B-221ENST00000540209 KANSL2Q9H9L4 492 aa23.18■■□□□ 1.3
RAP1B-221ENST00000540209 IGHDP01880 384 aa23.17■■□□□ 1.3
RAP1B-221ENST00000540209 APPP05067 770 aa23.17■■□□□ 1.3
RAP1B-221ENST00000540209 EEF2P13639 858 aaKnown RBP23.17■■□□□ 1.3
RAP1B-221ENST00000540209 GPR142Q7Z601 462 aa23.17■■□□□ 1.3
RAP1B-221ENST00000540209 SOCS4Q8WXH5 440 aa23.17■■□□□ 1.3
RAP1B-221ENST00000540209 BTBD7Q9P203 1132 aa23.17■■□□□ 1.3
RAP1B-221ENST00000540209 SUPT16HQ9Y5B9 1047 aaKnown RBP23.17■■□□□ 1.3
RAP1B-221ENST00000540209 MYH4Q9Y623 1939 aa23.17■■□□□ 1.3
RAP1B-221ENST00000540209 HMGCRP04035 888 aa23.16■■□□□ 1.3
RAP1B-221ENST00000540209 COG2Q14746 738 aa23.16■■□□□ 1.3
RAP1B-221ENST00000540209 USP6NLQ92738 828 aa23.16■■□□□ 1.3
RAP1B-221ENST00000540209 NUDT12Q9BQG2 462 aa23.16■■□□□ 1.3
RAP1B-221ENST00000540209 TANGO6Q9C0B7 1094 aa23.16■■□□□ 1.3
RAP1B-221ENST00000540209 COL11A1P12107 1806 aaPredicted RBP23.16■■□□□ 1.3
RAP1B-221ENST00000540209 FOXP2O15409 715 aa23.15■■□□□ 1.3
RAP1B-221ENST00000540209 CCNA1P78396 465 aa23.15■■□□□ 1.3
RAP1B-221ENST00000540209 MORN1Q5T089 497 aa23.15■■□□□ 1.3
RAP1B-221ENST00000540209 PLEKHH3Q7Z736 793 aa23.15■■□□□ 1.3
RAP1B-221ENST00000540209 CCAR1Q8IX12 1150 aaKnown RBP23.15■■□□□ 1.3
RAP1B-221ENST00000540209 SPICE1Q8N0Z3 855 aa23.15■■□□□ 1.3
RAP1B-221ENST00000540209 STK11IPQ8N1F8 1099 aa23.15■■□□□ 1.3
RAP1B-221ENST00000540209 NACAP1Q9BZK3 213 aa23.15■■□□□ 1.3
RAP1B-221ENST00000540209 MKNK2Q9HBH9 465 aa23.15■■□□□ 1.3
RAP1B-221ENST00000540209 PAK6Q9NQU5 681 aaPredicted RBP23.15■■□□□ 1.3
RAP1B-221ENST00000540209 WDR46O15213 610 aaKnown RBP23.14■■□□□ 1.29
RAP1B-221ENST00000540209 XRCC5P13010 732 aaKnown RBP23.14■■□□□ 1.29
RAP1B-221ENST00000540209 NUCB1Q02818 461 aa23.14■■□□□ 1.29
RAP1B-221ENST00000540209 B4GALNT3Q6L9W6 998 aa23.14■■□□□ 1.29
RAP1B-221ENST00000540209 CHD1LQ86WJ1 897 aa23.14■■□□□ 1.29
RAP1B-221ENST00000540209 U2AF1L4Q8WU68 220 aaKnown RBP23.14■■□□□ 1.29
RAP1B-221ENST00000540209 TRIB2Q92519 343 aa23.14■■□□□ 1.29
RAP1B-221ENST00000540209 HOXC10Q9NYD6 342 aa23.14■■□□□ 1.29
RAP1B-221ENST00000540209 ZNF236Q9UL36 1845 aa23.14■■□□□ 1.29
RAP1B-221ENST00000540209 CYP2B6P20813 491 aa23.13■■□□□ 1.29
RAP1B-221ENST00000540209 CCDC129Q6ZRS4 1044 aa23.13■■□□□ 1.29
RAP1B-221ENST00000540209 TICAM2Q86XR7 235 aa23.13■■□□□ 1.29
RAP1B-221ENST00000540209 NAPBQ9H115 298 aa23.13■■□□□ 1.29
RAP1B-221ENST00000540209 SGPL1O95470 568 aa23.12■■□□□ 1.29
RAP1B-221ENST00000540209 ATP2B2Q01814 1243 aa23.12■■□□□ 1.29
RAP1B-221ENST00000540209 HABP4Q5JVS0 413 aaKnown RBP23.12■■□□□ 1.29
RAP1B-221ENST00000540209 UBE2Q1Q7Z7E8 422 aa23.12■■□□□ 1.29
RAP1B-221ENST00000540209 ZNF287Q9HBT7 754 aa23.12■■□□□ 1.29
RAP1B-221ENST00000540209 GOPCQ9HD26 462 aa23.12■■□□□ 1.29
RAP1B-221ENST00000540209 IGKV6D-41A0A0C4DH26 115 aa23.11■■□□□ 1.29
RAP1B-221ENST00000540209 PRDM1O75626 825 aa23.11■■□□□ 1.29
RAP1B-221ENST00000540209 FLOT1O75955 427 aa23.11■■□□□ 1.29
RAP1B-221ENST00000540209 DSG3P32926 999 aa23.11■■□□□ 1.29
RAP1B-221ENST00000540209 TRIM32Q13049 653 aa23.11■■□□□ 1.29
RAP1B-221ENST00000540209 MB21D1Q8N884 522 aa23.11■■□□□ 1.29
RAP1B-221ENST00000540209 OSBPL3Q9H4L5 887 aa23.11■■□□□ 1.29
RAP1B-221ENST00000540209 HELLSQ9NRZ9 838 aa23.11■■□□□ 1.29
RAP1B-221ENST00000540209 NYAP2Q9P242 653 aa23.11■■□□□ 1.29
RAP1B-221ENST00000540209 PLIN4Q96Q06 1357 aa23.11■■□□□ 1.29
RAP1B-221ENST00000540209 RGS2P41220 211 aa23.1■■□□□ 1.29
RAP1B-221ENST00000540209 PPARAQ07869 468 aa23.1■■□□□ 1.29
RAP1B-221ENST00000540209 MAP3K21Q5TCX8 1036 aa23.1■■□□□ 1.29
RAP1B-221ENST00000540209 PLEKHM2Q8IWE5 1019 aa23.1■■□□□ 1.29
RAP1B-221ENST00000540209 TRMT44Q8IYL2 757 aaKnown RBP23.1■■□□□ 1.29
RAP1B-221ENST00000540209 DEFB118Q96PH6 123 aa23.1■■□□□ 1.29
RAP1B-221ENST00000540209 APBA2Q99767 749 aa23.1■■□□□ 1.29
RAP1B-221ENST00000540209 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.1■■□□□ 1.298e-42■■■■■ 28.4
RAP1B-221ENST00000540209 CWC22Q9HCG8 908 aaKnown RBP23.1■■□□□ 1.29
RAP1B-221ENST00000540209 RPTORQ8N122 1335 aa23.09■■□□□ 1.29
RAP1B-221ENST00000540209 CAPN2P17655 700 aa23.09■■□□□ 1.29
RAP1B-221ENST00000540209 PTPREP23469 700 aa23.09■■□□□ 1.29
RAP1B-221ENST00000540209 MAP2K5Q13163 448 aa23.09■■□□□ 1.29
RAP1B-221ENST00000540209 VPS53Q5VIR6 699 aa23.09■■□□□ 1.29
RAP1B-221ENST00000540209 ZNF444Q8N0Y2 327 aaPredicted RBP23.09■■□□□ 1.29
RAP1B-221ENST00000540209 ATG4CQ96DT6 458 aa23.09■■□□□ 1.29
RAP1B-221ENST00000540209 FAM227BQ96M60 508 aa23.09■■□□□ 1.29
RAP1B-221ENST00000540209 MOV10L1Q9BXT6 1211 aaKnown RBP23.09■■□□□ 1.29
RAP1B-221ENST00000540209 SPATC1LQ9H0A9 340 aa23.09■■□□□ 1.29
RAP1B-221ENST00000540209 CRISPLD2Q9H0B8 497 aa23.09■■□□□ 1.29
RAP1B-221ENST00000540209 A0A0D9SFI3 127 aa23.08■■□□□ 1.29
RAP1B-221ENST00000540209 SLC15A5A6NIM6 579 aa23.08■■□□□ 1.29
RAP1B-221ENST00000540209 ZKSCAN1P17029 563 aaPredicted RBP23.08■■□□□ 1.29
RAP1B-221ENST00000540209 PDE4BQ07343 736 aa23.08■■□□□ 1.29
RAP1B-221ENST00000540209 GRB14Q14449 540 aa23.08■■□□□ 1.29
RAP1B-221ENST00000540209 CCL14Q16627 93 aa23.08■■□□□ 1.29
RAP1B-221ENST00000540209 WDR78Q5VTH9 848 aa23.08■■□□□ 1.29
RAP1B-221ENST00000540209 ADAMTS5Q9UNA0 930 aa23.08■■□□□ 1.29
RAP1B-221ENST00000540209 TRIM6-TRIM34B2RNG4 842 aa23.07■■□□□ 1.28
RAP1B-221ENST00000540209 SLC3A2P08195 630 aaKnown RBP23.07■■□□□ 1.28
RAP1B-221ENST00000540209 PRKAR2AP13861 404 aaKnown RBP23.07■■□□□ 1.28
RAP1B-221ENST00000540209 SHCBP1Q8NEM2 672 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms