RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 MYO1BO43795 1136 aa19.52■□□□□ 0.72
COPS3-212ENST00000539941 AKR1B1P15121 316 aa19.52■□□□□ 0.72
COPS3-212ENST00000539941 XBP1P17861 261 aa19.52■□□□□ 0.72
COPS3-212ENST00000539941 EIF6P56537 245 aaKnown RBP19.52■□□□□ 0.72
COPS3-212ENST00000539941 RASSF7Q02833 373 aa19.52■□□□□ 0.72
COPS3-212ENST00000539941 OTUD7BQ6GQQ9 843 aa19.52■□□□□ 0.72
COPS3-212ENST00000539941 KIF3CO14782 793 aa19.52■□□□□ 0.71
COPS3-212ENST00000539941 XRCC6P12956 609 aaKnown RBP eCLIP19.52■□□□□ 0.71
COPS3-212ENST00000539941 ZNF280AP59817 542 aaPredicted RBP19.52■□□□□ 0.71
COPS3-212ENST00000539941 TATDN1Q6P1N9 297 aa19.52■□□□□ 0.71
COPS3-212ENST00000539941 CMTR1Q8N1G2 835 aaKnown RBP19.52■□□□□ 0.71
COPS3-212ENST00000539941 FAM151AQ8WW52 585 aa19.52■□□□□ 0.71
COPS3-212ENST00000539941 SPATA32Q96LK8 384 aa19.52■□□□□ 0.71
COPS3-212ENST00000539941 DNAJC18Q9H819 358 aa19.52■□□□□ 0.71
COPS3-212ENST00000539941 GUCY1A2P33402 732 aa19.51■□□□□ 0.71
COPS3-212ENST00000539941 SAFBQ15424 915 aaKnown RBP eCLIP19.51■□□□□ 0.71
COPS3-212ENST00000539941 FAM83AQ86UY5 434 aa19.51■□□□□ 0.71
COPS3-212ENST00000539941 CCDC82Q8N4S0 544 aa19.51■□□□□ 0.71
COPS3-212ENST00000539941 SRBD1Q8N5C6 995 aaKnown RBP19.51■□□□□ 0.71
COPS3-212ENST00000539941 DPF2Q92785 391 aa19.51■□□□□ 0.71
COPS3-212ENST00000539941 RNF181Q9P0P0 153 aa19.51■□□□□ 0.71
COPS3-212ENST00000539941 PALM3A6NDB9 673 aaPredicted RBP19.5■□□□□ 0.71
COPS3-212ENST00000539941 TTLL1O95922 423 aa19.5■□□□□ 0.71
COPS3-212ENST00000539941 U2AF2P26368 475 aaKnown RBP eCLIP19.5■□□□□ 0.71
COPS3-212ENST00000539941 TERF1P54274 439 aa19.5■□□□□ 0.71
COPS3-212ENST00000539941 PKN1Q16512 942 aa19.5■□□□□ 0.71
COPS3-212ENST00000539941 LEO1Q8WVC0 666 aaPredicted RBP19.5■□□□□ 0.71
COPS3-212ENST00000539941 MYOZ2Q9NPC6 264 aa19.5■□□□□ 0.71
COPS3-212ENST00000539941 GJB4Q9NTQ9 266 aa19.5■□□□□ 0.71
COPS3-212ENST00000539941 MAD2L2Q9UI95 211 aa19.5■□□□□ 0.71
COPS3-212ENST00000539941 HERC5Q9UII4 1024 aaKnown RBP19.5■□□□□ 0.71
COPS3-212ENST00000539941 GADD45BO75293 160 aaPredicted RBP19.49■□□□□ 0.71
COPS3-212ENST00000539941 MMP1P03956 469 aa19.49■□□□□ 0.71
COPS3-212ENST00000539941 SMARCA1P28370 1054 aa19.49■□□□□ 0.71
COPS3-212ENST00000539941 TFIP11Q9UBB9 837 aaKnown RBP19.49■□□□□ 0.71
COPS3-212ENST00000539941 V9GY48 417 aaPredicted RBP19.49■□□□□ 0.71
COPS3-212ENST00000539941 SBF1O95248 1867 aa19.49■□□□□ 0.71
COPS3-212ENST00000539941 CERKLQ49MI3 558 aaPredicted RBP19.49■□□□□ 0.71
COPS3-212ENST00000539941 MYSM1Q5VVJ2 828 aa19.49■□□□□ 0.71
COPS3-212ENST00000539941 SYAP1Q96A49 352 aaPredicted RBP19.49■□□□□ 0.71
COPS3-212ENST00000539941 CSRNP1Q96S65 589 aa19.49■□□□□ 0.71
COPS3-212ENST00000539941 GZF1Q9H116 711 aaPredicted RBP19.49■□□□□ 0.71
COPS3-212ENST00000539941 RCOR1Q9UKL0 485 aa19.49■□□□□ 0.71
COPS3-212ENST00000539941 DICER1Q9UPY3 1922 aaKnown RBP19.48■□□□□ 0.71
COPS3-212ENST00000539941 CLRN2A0PK11 232 aa19.48■□□□□ 0.71
COPS3-212ENST00000539941 KIF28PB7ZC32 967 aa19.48■□□□□ 0.71
COPS3-212ENST00000539941 TCP10L2B9ZVM9 353 aa19.48■□□□□ 0.71
COPS3-212ENST00000539941 UBE2Q2LH0YL09 131 aa19.48■□□□□ 0.71
COPS3-212ENST00000539941 WNT10BO00744 389 aa19.48■□□□□ 0.71
COPS3-212ENST00000539941 PARP1P09874 1014 aaKnown RBP19.48■□□□□ 0.71
COPS3-212ENST00000539941 LMNB1P20700 586 aa19.48■□□□□ 0.71
COPS3-212ENST00000539941 GNL2Q13823 731 aaKnown RBP19.48■□□□□ 0.71
COPS3-212ENST00000539941 FAM177A1Q8N128 213 aaPredicted RBP19.48■□□□□ 0.71
COPS3-212ENST00000539941 FOXP1Q9H334 677 aaPredicted RBP19.48■□□□□ 0.71
COPS3-212ENST00000539941 CNTNAP1P78357 1384 aa19.47■□□□□ 0.71
COPS3-212ENST00000539941 ESPNB1AK53 854 aa19.47■□□□□ 0.71
COPS3-212ENST00000539941 MPHOSPH10O00566 681 aaKnown RBP19.47■□□□□ 0.71
COPS3-212ENST00000539941 PFKFB3Q16875 520 aaPredicted RBP19.47■□□□□ 0.71
COPS3-212ENST00000539941 CAVIN1Q6NZI2 390 aaKnown RBP19.47■□□□□ 0.71
COPS3-212ENST00000539941 TMEM179Q6ZVK1 233 aa19.47■□□□□ 0.71
COPS3-212ENST00000539941 USP28Q96RU2 1077 aa19.47■□□□□ 0.71
COPS3-212ENST00000539941 SPZ1Q9BXG8 430 aa19.47■□□□□ 0.71
COPS3-212ENST00000539941 KANSL2Q9H9L4 492 aa19.47■□□□□ 0.71
COPS3-212ENST00000539941 POLR3EQ9NVU0 708 aa19.47■□□□□ 0.71
COPS3-212ENST00000539941 RTEL1Q9NZ71 1219 aa19.47■□□□□ 0.71
COPS3-212ENST00000539941 SNHG28P0DPA3 235 aa19.46■□□□□ 0.71
COPS3-212ENST00000539941 SCG2P13521 617 aa19.46■□□□□ 0.71
COPS3-212ENST00000539941 ASPRV1Q53RT3 343 aa19.46■□□□□ 0.71
COPS3-212ENST00000539941 STAG2Q8N3U4 1231 aa19.46■□□□□ 0.71
COPS3-212ENST00000539941 VEZTQ9HBM0 779 aa19.46■□□□□ 0.71
COPS3-212ENST00000539941 NMRK2Q9NPI5 230 aa19.46■□□□□ 0.71
COPS3-212ENST00000539941 NYAP2Q9P242 653 aa19.46■□□□□ 0.71
COPS3-212ENST00000539941 YEATS4O95619 227 aa19.46■□□□□ 0.71
COPS3-212ENST00000539941 TNNI2P48788 182 aa19.46■□□□□ 0.71
COPS3-212ENST00000539941 GMPSP49915 693 aaPredicted RBP19.46■□□□□ 0.71
COPS3-212ENST00000539941 DIS3L2Q8IYB7 885 aaKnown RBP19.46■□□□□ 0.71
COPS3-212ENST00000539941 MKL1Q969V6 931 aa19.46■□□□□ 0.71
COPS3-212ENST00000539941 SH3GLB2Q9NR46 395 aa19.46■□□□□ 0.71
COPS3-212ENST00000539941 CLIP2Q9UDT6 1046 aa19.46■□□□□ 0.71
COPS3-212ENST00000539941 MYH4Q9Y623 1939 aa19.45■□□□□ 0.7
COPS3-212ENST00000539941 GOLGA6L4A6NEF3 574 aa19.45■□□□□ 0.7
COPS3-212ENST00000539941 KLRF2D3W0D1 207 aa19.45■□□□□ 0.7
COPS3-212ENST00000539941 TBC1D12O60347 775 aa19.45■□□□□ 0.7
COPS3-212ENST00000539941 PDHBP11177 359 aa19.45■□□□□ 0.7
COPS3-212ENST00000539941 NASPP49321 788 aaPredicted RBP19.45■□□□□ 0.7
COPS3-212ENST00000539941 TNFAIP1Q13829 316 aa19.45■□□□□ 0.7
COPS3-212ENST00000539941 NOSTRINQ8IVI9 506 aa19.45■□□□□ 0.7
COPS3-212ENST00000539941 PHF20Q9BVI0 1012 aa19.45■□□□□ 0.7
COPS3-212ENST00000539941 BRMS1Q9HCU9 246 aa19.45■□□□□ 0.7
COPS3-212ENST00000539941 ABCB5Q2M3G0 1257 aa19.44■□□□□ 0.7
COPS3-212ENST00000539941 NBPF9Q3BBW0 867 aa19.44■□□□□ 0.7
COPS3-212ENST00000539941 MICALL2Q8IY33 904 aa19.44■□□□□ 0.7
COPS3-212ENST00000539941 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.44■□□□□ 0.7
COPS3-212ENST00000539941 VPS54Q9P1Q0 977 aa19.44■□□□□ 0.7
COPS3-212ENST00000539941 SYNPO2Q9UMS6 1093 aa19.44■□□□□ 0.7
COPS3-212ENST00000539941 KCNJ14Q9UNX9 436 aa19.44■□□□□ 0.7
COPS3-212ENST00000539941 FAM196BA6NMK8 535 aa19.43■□□□□ 0.7
COPS3-212ENST00000539941 RBM26Q5T8P6 1007 aaKnown RBP19.43■□□□□ 0.7
COPS3-212ENST00000539941 LRRC47Q8N1G4 583 aaKnown RBP19.43■□□□□ 0.7
COPS3-212ENST00000539941 KCNG4Q8TDN1 519 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms