RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 WTAPQ15007 396 aa10.75□□□□□ -0.69
RTN4IP1-204ENST00000539449 APOA5Q6Q788 366 aa10.75□□□□□ -0.69
RTN4IP1-204ENST00000539449 SGMS1Q86VZ5 419 aa10.75□□□□□ -0.69
RTN4IP1-204ENST00000539449 METTL16Q86W50 562 aaKnown RBP10.75□□□□□ -0.69
RTN4IP1-204ENST00000539449 CLEC10AQ8IUN9 316 aa10.75□□□□□ -0.69
RTN4IP1-204ENST00000539449 CCDC144CPQ8IYA2 1237 aa10.75□□□□□ -0.69
RTN4IP1-204ENST00000539449 NEDD1Q8NHV4 660 aa10.75□□□□□ -0.69
RTN4IP1-204ENST00000539449 DCPSQ96C86 337 aaKnown RBP10.75□□□□□ -0.69
RTN4IP1-204ENST00000539449 INTS4Q96HW7 963 aaKnown RBP10.75□□□□□ -0.69
RTN4IP1-204ENST00000539449 MTA3Q9BTC8 594 aa10.75□□□□□ -0.69
RTN4IP1-204ENST00000539449 EHD4Q9H223 541 aa10.75□□□□□ -0.69
RTN4IP1-204ENST00000539449 TMOD2Q9NZR1 351 aa10.75□□□□□ -0.69
RTN4IP1-204ENST00000539449 SERPINB13Q9UIV8 391 aa10.75□□□□□ -0.69
RTN4IP1-204ENST00000539449 MYH4Q9Y623 1939 aa10.75□□□□□ -0.69
RTN4IP1-204ENST00000539449 IGKV6D-41A0A0C4DH26 115 aa10.74□□□□□ -0.69
RTN4IP1-204ENST00000539449 GOLGA8BA8MQT2 603 aa10.74□□□□□ -0.69
RTN4IP1-204ENST00000539449 GJB2P29033 226 aa10.74□□□□□ -0.69
RTN4IP1-204ENST00000539449 ADD1P35611 737 aaKnown RBP10.74□□□□□ -0.69
RTN4IP1-204ENST00000539449 TM4SF4P48230 202 aa10.74□□□□□ -0.69
RTN4IP1-204ENST00000539449 RASA3Q14644 834 aa10.74□□□□□ -0.69
RTN4IP1-204ENST00000539449 FKBP1CQ5VVH2 108 aa10.74□□□□□ -0.69
RTN4IP1-204ENST00000539449 NFXL1Q6ZNB6 911 aa10.74□□□□□ -0.69
RTN4IP1-204ENST00000539449 FOXP4Q8IVH2 680 aaPredicted RBP10.74□□□□□ -0.69
RTN4IP1-204ENST00000539449 PIP4P2Q8N4L2 257 aa10.74□□□□□ -0.69
RTN4IP1-204ENST00000539449 NSUN7Q8NE18 718 aaKnown RBP10.74□□□□□ -0.69
RTN4IP1-204ENST00000539449 ANKS1AQ92625 1134 aa10.74□□□□□ -0.69
RTN4IP1-204ENST00000539449 TEPSINQ96N21 525 aa10.74□□□□□ -0.69
RTN4IP1-204ENST00000539449 UBAC1Q9BSL1 405 aa10.74□□□□□ -0.69
RTN4IP1-204ENST00000539449 DHX36Q9H2U1 1008 aaKnown RBP10.74□□□□□ -0.69
RTN4IP1-204ENST00000539449 R3HDMLQ9H3Y0 253 aa10.74□□□□□ -0.69
RTN4IP1-204ENST00000539449 TCP11L1Q9NUJ3 509 aa10.74□□□□□ -0.69
RTN4IP1-204ENST00000539449 PI4KBQ9UBF8 816 aa10.74□□□□□ -0.69
RTN4IP1-204ENST00000539449 ZDHHC9Q9Y397 364 aa10.74□□□□□ -0.69
RTN4IP1-204ENST00000539449 TRIM17Q9Y577 477 aa10.74□□□□□ -0.69
RTN4IP1-204ENST00000539449 MYH6P13533 1939 aa10.74□□□□□ -0.69
RTN4IP1-204ENST00000539449 ATAD5Q96QE3 1844 aa10.73□□□□□ -0.69
RTN4IP1-204ENST00000539449 CCDC69A6NI79 296 aa10.73□□□□□ -0.69
RTN4IP1-204ENST00000539449 PITPNM1O00562 1244 aa10.73□□□□□ -0.69
RTN4IP1-204ENST00000539449 ZBTB43O43298 467 aa10.73□□□□□ -0.69
RTN4IP1-204ENST00000539449 MYO1BO43795 1136 aa10.73□□□□□ -0.69
RTN4IP1-204ENST00000539449 TSPY3P0CV98 308 aa10.73□□□□□ -0.69
RTN4IP1-204ENST00000539449 TSPY8P0CW00 308 aa10.73□□□□□ -0.69
RTN4IP1-204ENST00000539449 MMP14P50281 582 aa10.73□□□□□ -0.69
RTN4IP1-204ENST00000539449 ANGEL2Q5VTE6 544 aaKnown RBP10.73□□□□□ -0.69
RTN4IP1-204ENST00000539449 PRAMEF18Q5VWM3 479 aa10.73□□□□□ -0.69
RTN4IP1-204ENST00000539449 TATDN1Q6P1N9 297 aa10.73□□□□□ -0.69
RTN4IP1-204ENST00000539449 OTOP1Q7RTM1 612 aa10.73□□□□□ -0.69
RTN4IP1-204ENST00000539449 FAM83AQ86UY5 434 aa10.73□□□□□ -0.69
RTN4IP1-204ENST00000539449 IQCA1Q86XH1 822 aa10.73□□□□□ -0.69
RTN4IP1-204ENST00000539449 ZNF654Q8IZM8 581 aa10.73□□□□□ -0.69
RTN4IP1-204ENST00000539449 CRACR2BQ8N4Y2 399 aaPredicted RBP10.73□□□□□ -0.69
RTN4IP1-204ENST00000539449 SMARCC2Q8TAQ2 1214 aa10.73□□□□□ -0.69
RTN4IP1-204ENST00000539449 CHMP4CQ96CF2 233 aa10.73□□□□□ -0.69
RTN4IP1-204ENST00000539449 CDCA5Q96FF9 252 aa10.73□□□□□ -0.69
RTN4IP1-204ENST00000539449 CFHR5Q9BXR6 569 aa10.73□□□□□ -0.69
RTN4IP1-204ENST00000539449 CHMP5Q9NZZ3 219 aa10.73□□□□□ -0.69
RTN4IP1-204ENST00000539449 SWAP70Q9UH65 585 aa10.73□□□□□ -0.69
RTN4IP1-204ENST00000539449 SMC3Q9UQE7 1217 aa10.73□□□□□ -0.69
RTN4IP1-204ENST00000539449 ERICH2A1L162 156 aa10.72□□□□□ -0.69
RTN4IP1-204ENST00000539449 GOLGA8AA7E2F4 631 aa10.72□□□□□ -0.69
RTN4IP1-204ENST00000539449 GDF11O95390 407 aa10.72□□□□□ -0.69
RTN4IP1-204ENST00000539449 FDPSP14324 419 aaKnown RBP10.72□□□□□ -0.69
RTN4IP1-204ENST00000539449 GUCY1A2P33402 732 aa10.72□□□□□ -0.69
RTN4IP1-204ENST00000539449 NOVP48745 357 aa10.72□□□□□ -0.69
RTN4IP1-204ENST00000539449 SART3Q15020 963 aaKnown RBP10.72□□□□□ -0.69
RTN4IP1-204ENST00000539449 NTRK3Q16288 839 aa10.72□□□□□ -0.69
RTN4IP1-204ENST00000539449 IFIT1BQ5T764 474 aaKnown RBP10.72□□□□□ -0.69
RTN4IP1-204ENST00000539449 MIGA2Q7L4E1 593 aa10.72□□□□□ -0.69
RTN4IP1-204ENST00000539449 RASGRP2Q7LDG7 609 aa10.72□□□□□ -0.69
RTN4IP1-204ENST00000539449 MICU3Q86XE3 530 aa10.72□□□□□ -0.69
RTN4IP1-204ENST00000539449 NUP133Q8WUM0 1156 aa10.72□□□□□ -0.69
RTN4IP1-204ENST00000539449 DDX11Q96FC9 970 aa10.72□□□□□ -0.69
RTN4IP1-204ENST00000539449 CEP95Q96GE4 821 aa10.72□□□□□ -0.69
RTN4IP1-204ENST00000539449 TMEM47Q9BQJ4 181 aa10.72□□□□□ -0.69
RTN4IP1-204ENST00000539449 COL25A1Q9BXS0 654 aaPredicted RBP10.72□□□□□ -0.69
RTN4IP1-204ENST00000539449 CWC22Q9HCG8 908 aaKnown RBP10.72□□□□□ -0.69
RTN4IP1-204ENST00000539449 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.72□□□□□ -0.69
RTN4IP1-204ENST00000539449 SLC12A7Q9Y666 1083 aa10.72□□□□□ -0.69
RTN4IP1-204ENST00000539449 PTPDC1A2A3K4 754 aa10.71□□□□□ -0.69
RTN4IP1-204ENST00000539449 UBE2Q2LH0YL09 131 aa10.71□□□□□ -0.69
RTN4IP1-204ENST00000539449 METAP2P50579 478 aaKnown RBP eCLIP10.71□□□□□ -0.69
RTN4IP1-204ENST00000539449 FOSBP53539 338 aa10.71□□□□□ -0.69
RTN4IP1-204ENST00000539449 FKBP1BP68106 108 aa10.71□□□□□ -0.69
RTN4IP1-204ENST00000539449 TROAPQ12815 778 aa10.71□□□□□ -0.69
RTN4IP1-204ENST00000539449 NID2Q14112 1375 aa10.71□□□□□ -0.69
RTN4IP1-204ENST00000539449 SEPT2Q15019 361 aa10.71□□□□□ -0.69
RTN4IP1-204ENST00000539449 CERKLQ49MI3 558 aaPredicted RBP10.71□□□□□ -0.69
RTN4IP1-204ENST00000539449 NBPF12Q5TAG4 269 aaPredicted RBP10.71□□□□□ -0.69
RTN4IP1-204ENST00000539449 FOXD4L5Q5VV16 416 aaPredicted RBP10.71□□□□□ -0.69
RTN4IP1-204ENST00000539449 DGKHQ86XP1 1220 aa10.71□□□□□ -0.69
RTN4IP1-204ENST00000539449 SIAH1Q8IUQ4 282 aa10.71□□□□□ -0.69
RTN4IP1-204ENST00000539449 SULF1Q8IWU6 871 aa10.71□□□□□ -0.69
RTN4IP1-204ENST00000539449 CMTR1Q8N1G2 835 aaKnown RBP10.71□□□□□ -0.69
RTN4IP1-204ENST00000539449 TMTC2Q8N394 836 aa10.71□□□□□ -0.69
RTN4IP1-204ENST00000539449 FOXD4L4Q8WXT5 416 aaPredicted RBP10.71□□□□□ -0.69
RTN4IP1-204ENST00000539449 ARMC5Q96C12 935 aa10.71□□□□□ -0.69
RTN4IP1-204ENST00000539449 PLIN4Q96Q06 1357 aa10.71□□□□□ -0.69
RTN4IP1-204ENST00000539449 TMEM106CQ9BVX2 250 aa10.71□□□□□ -0.69
RTN4IP1-204ENST00000539449 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.71□□□□□ -0.69
RTN4IP1-204ENST00000539449 ZNF287Q9HBT7 754 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms