RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 PCDHB6Q9Y5E3 794 aa15.52■□□□□ 0.08
SMG6-203ENST00000536871 PLIN4Q96Q06 1357 aa15.52■□□□□ 0.07
SMG6-203ENST00000536871 hCG_1984214I3L0E3 225 aa15.52■□□□□ 0.07
SMG6-203ENST00000536871 NMT2O60551 498 aa15.52■□□□□ 0.07
SMG6-203ENST00000536871 APBA3O96018 575 aa15.52■□□□□ 0.07
SMG6-203ENST00000536871 CDK8P49336 464 aa15.52■□□□□ 0.07
SMG6-203ENST00000536871 NT5DC1Q5TFE4 455 aa15.52■□□□□ 0.07
SMG6-203ENST00000536871 ARL6IP4Q66PJ3 421 aaKnown RBP15.52■□□□□ 0.07
SMG6-203ENST00000536871 DPP8Q6V1X1 898 aaPredicted RBP15.52■□□□□ 0.07
SMG6-203ENST00000536871 MTERF4Q7Z6M4 381 aaKnown RBP15.52■□□□□ 0.07
SMG6-203ENST00000536871 COL23A1Q86Y22 540 aaPredicted RBP15.52■□□□□ 0.07
SMG6-203ENST00000536871 AOPEPQ8N6M6 819 aa15.52■□□□□ 0.07
SMG6-203ENST00000536871 ZNF713Q8N859 430 aaPredicted RBP15.52■□□□□ 0.07
SMG6-203ENST00000536871 OXER1Q8TDS5 423 aa15.52■□□□□ 0.07
SMG6-203ENST00000536871 CLIC6Q96NY7 704 aa15.52■□□□□ 0.07
SMG6-203ENST00000536871 MRIQ9BWK5 157 aa15.52■□□□□ 0.07
SMG6-203ENST00000536871 SPZ1Q9BXG8 430 aa15.52■□□□□ 0.07
SMG6-203ENST00000536871 SWAP70Q9UH65 585 aa15.52■□□□□ 0.07
SMG6-203ENST00000536871 C10orf71Q711Q0 1435 aa15.51■□□□□ 0.07
SMG6-203ENST00000536871 SMC2O95347 1197 aa15.51■□□□□ 0.07
SMG6-203ENST00000536871 TOP1P11387 765 aaKnown RBP15.51■□□□□ 0.07
SMG6-203ENST00000536871 NOVP48745 357 aa15.51■□□□□ 0.07
SMG6-203ENST00000536871 NOLC1Q14978 699 aaKnown RBP eCLIP15.51■□□□□ 0.07
SMG6-203ENST00000536871 GRIK5Q16478 980 aa15.51■□□□□ 0.07
SMG6-203ENST00000536871 DPCR1Q3MIW9 517 aa15.51■□□□□ 0.07
SMG6-203ENST00000536871 TTC38Q5R3I4 469 aa15.51■□□□□ 0.07
SMG6-203ENST00000536871 HHIPL2Q6UWX4 724 aa15.51■□□□□ 0.07
SMG6-203ENST00000536871 PODNQ7Z5L7 613 aa15.51■□□□□ 0.07
SMG6-203ENST00000536871 MLKLQ8NB16 471 aa15.51■□□□□ 0.07
SMG6-203ENST00000536871 SPC24Q8NBT2 197 aa15.51■□□□□ 0.07
SMG6-203ENST00000536871 DYNLL2Q96FJ2 89 aa15.51■□□□□ 0.07
SMG6-203ENST00000536871 TTC12Q9H892 705 aaPredicted RBP15.51■□□□□ 0.07
SMG6-203ENST00000536871 PALM3A6NDB9 673 aaPredicted RBP15.5■□□□□ 0.07
SMG6-203ENST00000536871 CBFA2T2O43439 604 aa15.5■□□□□ 0.07
SMG6-203ENST00000536871 GTF2IP78347 998 aa15.5■□□□□ 0.07
SMG6-203ENST00000536871 ATP2C1P98194 919 aaPredicted RBP15.5■□□□□ 0.07
SMG6-203ENST00000536871 POSTNQ15063 836 aa15.5■□□□□ 0.07
SMG6-203ENST00000536871 KIAA1524Q8TCG1 905 aa15.5■□□□□ 0.07
SMG6-203ENST00000536871 GPR101Q96P66 508 aaPredicted RBP15.5■□□□□ 0.07
SMG6-203ENST00000536871 PCDHA4Q9UN74 947 aa15.5■□□□□ 0.07
SMG6-203ENST00000536871 G3V3G9 751 aa15.5■□□□□ 0.07
SMG6-203ENST00000536871 PLCD1P51178 756 aa15.5■□□□□ 0.07
SMG6-203ENST00000536871 MYL5Q02045 173 aa15.5■□□□□ 0.07
SMG6-203ENST00000536871 ZNF827Q17R98 1081 aa15.5■□□□□ 0.07
SMG6-203ENST00000536871 LONRF3Q496Y0 759 aa15.5■□□□□ 0.07
SMG6-203ENST00000536871 DCAF8Q5TAQ9 597 aa15.5■□□□□ 0.07
SMG6-203ENST00000536871 STYK1Q6J9G0 422 aa15.5■□□□□ 0.07
SMG6-203ENST00000536871 BLIDQ8IZY5 108 aa15.5■□□□□ 0.07
SMG6-203ENST00000536871 TMEM47Q9BQJ4 181 aa15.5■□□□□ 0.07
SMG6-203ENST00000536871 MAD2L2Q9UI95 211 aa15.5■□□□□ 0.07
SMG6-203ENST00000536871 STX8Q9UNK0 236 aa15.5■□□□□ 0.07
SMG6-203ENST00000536871 DAGLAQ9Y4D2 1042 aa15.5■□□□□ 0.07
SMG6-203ENST00000536871 RGPD3A6NKT7 1758 aaPredicted RBP15.49■□□□□ 0.07
SMG6-203ENST00000536871 RGPD4Q7Z3J3 1758 aa15.49■□□□□ 0.07
SMG6-203ENST00000536871 LAD1O00515 517 aa15.49■□□□□ 0.07
SMG6-203ENST00000536871 NRDCO43847 1150 aa15.49■□□□□ 0.07
SMG6-203ENST00000536871 HDLBPQ00341 1268 aaKnown RBP15.49■□□□□ 0.07
SMG6-203ENST00000536871 ORC2Q13416 577 aaPredicted RBP15.49■□□□□ 0.07
SMG6-203ENST00000536871 NPY5RQ15761 445 aa15.49■□□□□ 0.07
SMG6-203ENST00000536871 DDX60LQ5H9U9 1706 aaKnown RBP15.49■□□□□ 0.07
SMG6-203ENST00000536871 CCDC186Q7Z3E2 898 aa15.49■□□□□ 0.07
SMG6-203ENST00000536871 METTL16Q86W50 562 aaKnown RBP15.49■□□□□ 0.07
SMG6-203ENST00000536871 SMARCE1Q969G3 411 aa15.49■□□□□ 0.07
SMG6-203ENST00000536871 MYH6P13533 1939 aa15.49■□□□□ 0.07
SMG6-203ENST00000536871 POLR2DO15514 142 aaKnown RBP15.48■□□□□ 0.07
SMG6-203ENST00000536871 MMP10P09238 476 aa15.48■□□□□ 0.07
SMG6-203ENST00000536871 PARP1P09874 1014 aaKnown RBP15.48■□□□□ 0.07
SMG6-203ENST00000536871 MDM2Q00987 491 aaPredicted RBP15.48■□□□□ 0.07
SMG6-203ENST00000536871 GRIPAP1Q4V328 841 aa15.48■□□□□ 0.07
SMG6-203ENST00000536871 CC2D2BQ6DHV5 1058 aa15.48■□□□□ 0.07
SMG6-203ENST00000536871 CSRNP2Q9H175 543 aa15.48■□□□□ 0.07
SMG6-203ENST00000536871 BARHL2Q9NY43 387 aa15.48■□□□□ 0.07
SMG6-203ENST00000536871 QSER1Q2KHR3 1735 aa15.48■□□□□ 0.07
SMG6-203ENST00000536871 SLFN14P0C7P3 912 aa15.48■□□□□ 0.07
SMG6-203ENST00000536871 GNA11P29992 359 aa15.48■□□□□ 0.07
SMG6-203ENST00000536871 TXLNAP40222 546 aa15.48■□□□□ 0.07
SMG6-203ENST00000536871 SEMA3FQ13275 785 aa15.48■□□□□ 0.07
SMG6-203ENST00000536871 TEKT1Q969V4 418 aa15.48■□□□□ 0.07
SMG6-203ENST00000536871 SAP30BPQ9UHR5 308 aaKnown RBP15.48■□□□□ 0.07
SMG6-203ENST00000536871 PCDHA5Q9Y5H7 936 aa15.48■□□□□ 0.07
SMG6-203ENST00000536871 SNED1Q8TER0 1413 aa15.47■□□□□ 0.07
SMG6-203ENST00000536871 CCDC194A0A1B0GVG4 234 aa15.47■□□□□ 0.07
SMG6-203ENST00000536871 USP17L3A6NCW0 530 aa15.47■□□□□ 0.07
SMG6-203ENST00000536871 USP17L4A6NCW7 530 aa15.47■□□□□ 0.07
SMG6-203ENST00000536871 HLA-DOAP06340 250 aa15.47■□□□□ 0.07
SMG6-203ENST00000536871 PTGS1P23219 599 aa15.47■□□□□ 0.07
SMG6-203ENST00000536871 LONP1P36776 959 aaKnown RBP15.47■□□□□ 0.07
SMG6-203ENST00000536871 SARSP49591 514 aaKnown RBP15.47■□□□□ 0.07
SMG6-203ENST00000536871 EVX2Q03828 476 aa15.47■□□□□ 0.07
SMG6-203ENST00000536871 PNOCQ13519 176 aa15.47■□□□□ 0.07
SMG6-203ENST00000536871 USP17L1Q7RTZ2 530 aa15.47■□□□□ 0.07
SMG6-203ENST00000536871 SHISA4Q96DD7 197 aa15.47■□□□□ 0.07
SMG6-203ENST00000536871 PRIMPOLQ96LW4 560 aa15.47■□□□□ 0.07
SMG6-203ENST00000536871 H0YIN7 160 aa15.46■□□□□ 0.07
SMG6-203ENST00000536871 ACTN4O43707 911 aaKnown RBP15.46■□□□□ 0.07
SMG6-203ENST00000536871 NPM3O75607 178 aaKnown RBP15.46■□□□□ 0.07
SMG6-203ENST00000536871 ATP2B1P20020 1258 aa15.46■□□□□ 0.07
SMG6-203ENST00000536871 RXRBP28702 533 aa15.46■□□□□ 0.07
SMG6-203ENST00000536871 GABPAQ06546 454 aa15.46■□□□□ 0.07
SMG6-203ENST00000536871 ASPRV1Q53RT3 343 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms