RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 TAOK3Q9H2K8 898 aa9.41□□□□□ -0.9
ABCA4-207ENST00000536513 HDAC9Q9UKV0 1011 aa9.41□□□□□ -0.9
ABCA4-207ENST00000536513 HPS5Q9UPZ3 1129 aa9.41□□□□□ -0.9
ABCA4-207ENST00000536513 FLT1P17948 1338 aa9.41□□□□□ -0.9
ABCA4-207ENST00000536513 KLRF2D3W0D1 207 aa9.41□□□□□ -0.9
ABCA4-207ENST00000536513 COBLO75128 1261 aa9.41□□□□□ -0.9
ABCA4-207ENST00000536513 TNNI2P48788 182 aa9.41□□□□□ -0.9
ABCA4-207ENST00000536513 NBPF9Q3BBW0 867 aa9.41□□□□□ -0.9
ABCA4-207ENST00000536513 GPATCH11Q8N954 259 aa9.41□□□□□ -0.9
ABCA4-207ENST00000536513 EEF2KMTQ96G04 330 aa9.41□□□□□ -0.9
ABCA4-207ENST00000536513 ZNF274Q96GC6 653 aaPredicted RBP9.41□□□□□ -0.9
ABCA4-207ENST00000536513 SCAND2PQ9GZW5 306 aaPredicted RBP9.41□□□□□ -0.9
ABCA4-207ENST00000536513 ZHX3Q9H4I2 956 aa9.41□□□□□ -0.9
ABCA4-207ENST00000536513 PRDM4Q9UKN5 801 aa9.41□□□□□ -0.9
ABCA4-207ENST00000536513 RPAP1Q9BWH6 1393 aaPredicted RBP9.4□□□□□ -0.9
ABCA4-207ENST00000536513 CCDC194A0A1B0GVG4 234 aa9.4□□□□□ -0.9
ABCA4-207ENST00000536513 ZNF500O60304 480 aaPredicted RBP9.4□□□□□ -0.9
ABCA4-207ENST00000536513 ERCC3P19447 782 aa9.4□□□□□ -0.9
ABCA4-207ENST00000536513 UBXN2AP68543 259 aa9.4□□□□□ -0.9
ABCA4-207ENST00000536513 CRY2Q49AN0 593 aa9.4□□□□□ -0.9
ABCA4-207ENST00000536513 ZNF287Q9HBT7 754 aa9.4□□□□□ -0.9
ABCA4-207ENST00000536513 BIN2Q9UBW5 565 aaPredicted RBP9.4□□□□□ -0.9
ABCA4-207ENST00000536513 BTAF1O14981 1849 aa9.4□□□□□ -0.9
ABCA4-207ENST00000536513 SIPA1L3O60292 1781 aaPredicted RBP9.4□□□□□ -0.9
ABCA4-207ENST00000536513 DDTLA6NHG4 134 aaPredicted RBP9.4□□□□□ -0.9
ABCA4-207ENST00000536513 USP17L5A8MUK1 530 aa9.4□□□□□ -0.9
ABCA4-207ENST00000536513 POLR3GO15318 223 aaPredicted RBP9.4□□□□□ -0.9
ABCA4-207ENST00000536513 SORBS3O60504 671 aa9.4□□□□□ -0.9
ABCA4-207ENST00000536513 GH2P01242 217 aa9.4□□□□□ -0.9
ABCA4-207ENST00000536513 PLCG2P16885 1265 aa9.4□□□□□ -0.9
ABCA4-207ENST00000536513 SEPT2Q15019 361 aa9.4□□□□□ -0.9
ABCA4-207ENST00000536513 LETM2Q2VYF4 491 aa9.4□□□□□ -0.9
ABCA4-207ENST00000536513 CERKLQ49MI3 558 aaPredicted RBP9.4□□□□□ -0.9
ABCA4-207ENST00000536513 TTBK2Q6IQ55 1244 aa9.4□□□□□ -0.9
ABCA4-207ENST00000536513 VWA3AA6NCI4 1184 aa9.4□□□□□ -0.91
ABCA4-207ENST00000536513 SEMA3EO15041 775 aa9.4□□□□□ -0.91
ABCA4-207ENST00000536513 PARP1P09874 1014 aaKnown RBP9.4□□□□□ -0.91
ABCA4-207ENST00000536513 TNNT1P13805 278 aa9.4□□□□□ -0.91
ABCA4-207ENST00000536513 SLC1A4P43007 532 aa9.4□□□□□ -0.91
ABCA4-207ENST00000536513 UBE2HP62256 183 aa9.4□□□□□ -0.91
ABCA4-207ENST00000536513 CCDC174Q6PII3 467 aa9.4□□□□□ -0.91
ABCA4-207ENST00000536513 FBXO18Q8NFZ0 1043 aa9.4□□□□□ -0.91
ABCA4-207ENST00000536513 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.4□□□□□ -0.91
ABCA4-207ENST00000536513 COL1A1P02452 1464 aaPredicted RBP9.39□□□□□ -0.91
ABCA4-207ENST00000536513 SPTLC2O15270 562 aa9.39□□□□□ -0.91
ABCA4-207ENST00000536513 GPS2Q13227 327 aa9.39□□□□□ -0.91
ABCA4-207ENST00000536513 C12orf60Q5U649 245 aa9.39□□□□□ -0.91
ABCA4-207ENST00000536513 PODNQ7Z5L7 613 aa9.39□□□□□ -0.91
ABCA4-207ENST00000536513 TMEM47Q9BQJ4 181 aa9.39□□□□□ -0.91
ABCA4-207ENST00000536513 ZMYM6O95789 1325 aa9.39□□□□□ -0.91
ABCA4-207ENST00000536513 KIF5BP33176 963 aa9.39□□□□□ -0.91
ABCA4-207ENST00000536513 FILIP1Q7Z7B0 1213 aa9.39□□□□□ -0.91
ABCA4-207ENST00000536513 STAG1Q8WVM7 1258 aa9.39□□□□□ -0.91
ABCA4-207ENST00000536513 RTFDC1Q9BY42 306 aaPredicted RBP9.39□□□□□ -0.91
ABCA4-207ENST00000536513 DNAJC25Q9H1X3 360 aa9.39□□□□□ -0.91
ABCA4-207ENST00000536513 RIOK3O14730 519 aaKnown RBP9.39□□□□□ -0.91
ABCA4-207ENST00000536513 TMTC2Q8N394 836 aa9.39□□□□□ -0.91
ABCA4-207ENST00000536513 KIFC2Q96AC6 838 aa9.39□□□□□ -0.91
ABCA4-207ENST00000536513 ZBTB9Q96C00 473 aa9.39□□□□□ -0.91
ABCA4-207ENST00000536513 ZNF512BQ96KM6 892 aaPredicted RBP9.39□□□□□ -0.91
ABCA4-207ENST00000536513 PIGSQ96S52 555 aa9.39□□□□□ -0.91
ABCA4-207ENST00000536513 CALCOCO1Q9P1Z2 691 aa9.39□□□□□ -0.91
ABCA4-207ENST00000536513 MAPK8IP1Q9UQF2 711 aa9.39□□□□□ -0.91
ABCA4-207ENST00000536513 COL4A1P02462 1669 aa9.38□□□□□ -0.91
ABCA4-207ENST00000536513 CASP1P29466 404 aa9.38□□□□□ -0.91
ABCA4-207ENST00000536513 CHMP4BP1P59074 171 aa9.38□□□□□ -0.91
ABCA4-207ENST00000536513 PLS1Q14651 629 aa9.38□□□□□ -0.91
ABCA4-207ENST00000536513 GRAMD1CQ8IYS0 662 aa9.38□□□□□ -0.91
ABCA4-207ENST00000536513 NOC3LQ8WTT2 800 aaKnown RBP9.38□□□□□ -0.91
ABCA4-207ENST00000536513 GJA10Q969M2 543 aa9.38□□□□□ -0.91
ABCA4-207ENST00000536513 EGFRP00533 1210 aa9.38□□□□□ -0.91
ABCA4-207ENST00000536513 ZNF445P59923 1031 aa9.38□□□□□ -0.91
ABCA4-207ENST00000536513 SP4Q02446 784 aa9.38□□□□□ -0.91
ABCA4-207ENST00000536513 DGKZQ13574 1117 aa9.38□□□□□ -0.91
ABCA4-207ENST00000536513 MAP3K11Q16584 847 aa9.38□□□□□ -0.91
ABCA4-207ENST00000536513 INF2Q27J81 1249 aa9.38□□□□□ -0.91
ABCA4-207ENST00000536513 MYSM1Q5VVJ2 828 aa9.38□□□□□ -0.91
ABCA4-207ENST00000536513 LUZP1Q86V48 1076 aa9.38□□□□□ -0.91
ABCA4-207ENST00000536513 ZC3H15Q8WU90 426 aaKnown RBP9.38□□□□□ -0.91
ABCA4-207ENST00000536513 DHX58Q96C10 678 aa9.38□□□□□ -0.91
ABCA4-207ENST00000536513 TRMT1Q9NXH9 659 aaKnown RBP9.38□□□□□ -0.91
ABCA4-207ENST00000536513 ASTN2O75129 1339 aaPredicted RBP9.38□□□□□ -0.91
ABCA4-207ENST00000536513 SHANK3Q9BYB0 1731 aa9.38□□□□□ -0.91
ABCA4-207ENST00000536513 TPM3P06753 285 aa9.38□□□□□ -0.91
ABCA4-207ENST00000536513 CXCL9Q07325 125 aa9.38□□□□□ -0.91
ABCA4-207ENST00000536513 RAD51AP2Q09MP3 1159 aa9.38□□□□□ -0.91
ABCA4-207ENST00000536513 SRBD1Q8N5C6 995 aaKnown RBP9.38□□□□□ -0.91
ABCA4-207ENST00000536513 MNS1Q8NEH6 495 aa9.38□□□□□ -0.91
ABCA4-207ENST00000536513 POLD4Q9HCU8 107 aa9.38□□□□□ -0.91
ABCA4-207ENST00000536513 YDJCA8MPS7 323 aa9.37□□□□□ -0.91
ABCA4-207ENST00000536513 HOXA10P31260 410 aaPredicted RBP9.37□□□□□ -0.91
ABCA4-207ENST00000536513 ICA1Q05084 483 aa9.37□□□□□ -0.91
ABCA4-207ENST00000536513 CIAPIN1Q6FI81 312 aa9.37□□□□□ -0.91
ABCA4-207ENST00000536513 GOLGA6L1Q8N7Z2 621 aa9.37□□□□□ -0.91
ABCA4-207ENST00000536513 PCDHB6Q9Y5E3 794 aa9.37□□□□□ -0.91
ABCA4-207ENST00000536513 RASA1P20936 1047 aa9.37□□□□□ -0.91
ABCA4-207ENST00000536513 WASF1Q92558 559 aa9.37□□□□□ -0.91
ABCA4-207ENST00000536513 DEXIO95424 95 aa9.36□□□□□ -0.91
ABCA4-207ENST00000536513 CCDC192P0DO97 292 aa9.36□□□□□ -0.91
ABCA4-207ENST00000536513 DDIT3P35638 169 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms