RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 SLC15A5A6NIM6 579 aa24.86■■□□□ 1.57
LTBR-205ENST00000535739 SWAP70Q9UH65 585 aa24.86■■□□□ 1.57
LTBR-205ENST00000535739 PFASO15067 1338 aa24.86■■□□□ 1.57
LTBR-205ENST00000535739 SMIM22K7EJ46 135 aa24.85■■□□□ 1.57
LTBR-205ENST00000535739 KIAA1755Q5JYT7 1200 aa24.85■■□□□ 1.57
LTBR-205ENST00000535739 C20orf194Q5TEA3 1177 aa24.85■■□□□ 1.57
LTBR-205ENST00000535739 TMEM179Q6ZVK1 233 aa24.85■■□□□ 1.57
LTBR-205ENST00000535739 CLEC10AQ8IUN9 316 aa24.85■■□□□ 1.57
LTBR-205ENST00000535739 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.85■■□□□ 1.571e-6■■■□□ 15.4
LTBR-205ENST00000535739 ATP8A2Q9NTI2 1148 aa24.85■■□□□ 1.57
LTBR-205ENST00000535739 IVNS1ABPQ9Y6Y0 642 aa24.85■■□□□ 1.57
LTBR-205ENST00000535739 CYP2D7A0A087X1C5 515 aa24.84■■□□□ 1.57
LTBR-205ENST00000535739 A0A1W2PPC1 479 aa24.84■■□□□ 1.57
LTBR-205ENST00000535739 AKR1B1P15121 316 aa24.84■■□□□ 1.57
LTBR-205ENST00000535739 GRB14Q14449 540 aa24.84■■□□□ 1.57
LTBR-205ENST00000535739 COG2Q14746 738 aa24.84■■□□□ 1.57
LTBR-205ENST00000535739 TANGO6Q9C0B7 1094 aa24.84■■□□□ 1.57
LTBR-205ENST00000535739 SMARCA5O60264 1052 aaPredicted RBP24.83■■□□□ 1.57
LTBR-205ENST00000535739 SYN1P17600 705 aa24.83■■□□□ 1.57
LTBR-205ENST00000535739 MFSD14CQ5VZR4 134 aa24.83■■□□□ 1.57
LTBR-205ENST00000535739 SIAH1Q8IUQ4 282 aa24.83■■□□□ 1.57
LTBR-205ENST00000535739 NPLOC4Q8TAT6 608 aa24.83■■□□□ 1.57
LTBR-205ENST00000535739 GDF15Q99988 308 aa24.83■■□□□ 1.57
LTBR-205ENST00000535739 HOXC10Q9NYD6 342 aa24.83■■□□□ 1.57
LTBR-205ENST00000535739 PARP14Q460N5 1801 aa24.82■■□□□ 1.56
LTBR-205ENST00000535739 A0A0G2JMZ2 1700 aa24.82■■□□□ 1.56
LTBR-205ENST00000535739 SOX1O00570 391 aaPredicted RBP24.82■■□□□ 1.56
LTBR-205ENST00000535739 COL6A1P12109 1028 aa24.82■■□□□ 1.56
LTBR-205ENST00000535739 ATP2B2Q01814 1243 aa24.82■■□□□ 1.56
LTBR-205ENST00000535739 MOV10L1Q9BXT6 1211 aaKnown RBP24.82■■□□□ 1.56
LTBR-205ENST00000535739 LRRCC1Q9C099 1032 aa24.82■■□□□ 1.56
LTBR-205ENST00000535739 ZNFX1Q9P2E3 1918 aaKnown RBP24.81■■□□□ 1.56
LTBR-205ENST00000535739 USP17L12C9JPN9 530 aa24.81■■□□□ 1.56
LTBR-205ENST00000535739 USP17L21D6R901 530 aa24.81■■□□□ 1.56
LTBR-205ENST00000535739 HOXC6P09630 235 aa24.81■■□□□ 1.56
LTBR-205ENST00000535739 CDK8P49336 464 aa24.81■■□□□ 1.56
LTBR-205ENST00000535739 UBE3CQ15386 1083 aa24.81■■□□□ 1.56
LTBR-205ENST00000535739 C12orf60Q5U649 245 aa24.81■■□□□ 1.56
LTBR-205ENST00000535739 SPICE1Q8N0Z3 855 aa24.81■■□□□ 1.56
LTBR-205ENST00000535739 ICA1Q05084 483 aa24.8■■□□□ 1.56
LTBR-205ENST00000535739 SPATC1LQ9H0A9 340 aa24.8■■□□□ 1.56
LTBR-205ENST00000535739 ARHGEF10LQ9HCE6 1279 aa24.8■■□□□ 1.56
LTBR-205ENST00000535739 TMX2Q9Y320 296 aa24.8■■□□□ 1.56
LTBR-205ENST00000535739 SLC4A4Q9Y6R1 1079 aa24.8■■□□□ 1.56
LTBR-205ENST00000535739 COL11A1P12107 1806 aaPredicted RBP24.79■■□□□ 1.56
LTBR-205ENST00000535739 CNGA1P29973 690 aa24.79■■□□□ 1.56
LTBR-205ENST00000535739 CYP2C19P33261 490 aa24.79■■□□□ 1.56
LTBR-205ENST00000535739 BMP8BP34820 402 aa24.79■■□□□ 1.56
LTBR-205ENST00000535739 C16orf86Q6ZW13 317 aa24.79■■□□□ 1.56
LTBR-205ENST00000535739 AMOTL1Q8IY63 956 aa24.79■■□□□ 1.56
LTBR-205ENST00000535739 LPAR1Q92633 364 aa24.79■■□□□ 1.56
LTBR-205ENST00000535739 PUS7LQ9H0K6 701 aaKnown RBP24.79■■□□□ 1.56
LTBR-205ENST00000535739 ZNF236Q9UL36 1845 aa24.79■■□□□ 1.56
LTBR-205ENST00000535739 FLOT1O75955 427 aa24.78■■□□□ 1.56
LTBR-205ENST00000535739 ERCC3P19447 782 aa24.78■■□□□ 1.56
LTBR-205ENST00000535739 ADORA2AP29274 412 aa24.78■■□□□ 1.56
LTBR-205ENST00000535739 DSG3P32926 999 aa24.78■■□□□ 1.56
LTBR-205ENST00000535739 LRRC26Q2I0M4 334 aa24.78■■□□□ 1.56
LTBR-205ENST00000535739 DPP9Q86TI2 863 aa24.78■■□□□ 1.56
LTBR-205ENST00000535739 LRCH3Q96II8 777 aa24.78■■□□□ 1.56
LTBR-205ENST00000535739 CCDC17Q96LX7 622 aa24.78■■□□□ 1.56
LTBR-205ENST00000535739 VCPKMTQ9H867 229 aa24.78■■□□□ 1.56
LTBR-205ENST00000535739 COL6A3P12111 3177 aa24.77■■□□□ 1.56
LTBR-205ENST00000535739 MAGEA10P43363 369 aaPredicted RBP24.77■■□□□ 1.56
LTBR-205ENST00000535739 PLS1Q14651 629 aa24.77■■□□□ 1.56
LTBR-205ENST00000535739 ZSCAN25Q6NSZ9 544 aa24.77■■□□□ 1.56
LTBR-205ENST00000535739 CTR9Q6PD62 1173 aa24.77■■□□□ 1.56
LTBR-205ENST00000535739 SAMD1Q6SPF0 538 aaPredicted RBP24.77■■□□□ 1.56
LTBR-205ENST00000535739 SHCBP1Q8NEM2 672 aa24.77■■□□□ 1.56
LTBR-205ENST00000535739 TRPV1Q8NER1 839 aa24.77■■□□□ 1.56
LTBR-205ENST00000535739 ATG4CQ96DT6 458 aa24.77■■□□□ 1.56
LTBR-205ENST00000535739 DDRGK1Q96HY6 314 aa24.77■■□□□ 1.56
LTBR-205ENST00000535739 SH2D4AQ9H788 454 aa24.77■■□□□ 1.56
LTBR-205ENST00000535739 DDX20Q9UHI6 824 aaKnown RBP24.77■■□□□ 1.56
LTBR-205ENST00000535739 STRNO43815 780 aa24.76■■□□□ 1.55
LTBR-205ENST00000535739 IGHA2P01877 340 aa24.76■■□□□ 1.55
LTBR-205ENST00000535739 MB21D1Q8N884 522 aa24.76■■□□□ 1.55
LTBR-205ENST00000535739 COBLO75128 1261 aa24.75■■□□□ 1.55
LTBR-205ENST00000535739 EEF2P13639 858 aaKnown RBP24.75■■□□□ 1.55
LTBR-205ENST00000535739 ECHDC1Q9NTX5 307 aa24.75■■□□□ 1.55
LTBR-205ENST00000535739 WDR46O15213 610 aaKnown RBP24.74■■□□□ 1.55
LTBR-205ENST00000535739 CYBAP13498 195 aa24.74■■□□□ 1.55
LTBR-205ENST00000535739 NCAPG2Q86XI2 1143 aa24.74■■□□□ 1.55
LTBR-205ENST00000535739 SENP6Q9GZR1 1112 aaPredicted RBP24.74■■□□□ 1.55
LTBR-205ENST00000535739 SMCHD1A6NHR9 2005 aa24.73■■□□□ 1.55
LTBR-205ENST00000535739 MSCO60682 206 aa24.73■■□□□ 1.55
LTBR-205ENST00000535739 OLFML2BQ68BL8 750 aa24.73■■□□□ 1.55
LTBR-205ENST00000535739 STRBPQ96SI9 672 aaKnown RBP24.73■■□□□ 1.55
LTBR-205ENST00000535739 MROH8Q9H579 483 aa24.73■■□□□ 1.55
LTBR-205ENST00000535739 KANSL2Q9H9L4 492 aa24.73■■□□□ 1.55
LTBR-205ENST00000535739 LAMA2P24043 3122 aaKnown RBP24.73■■□□□ 1.55
LTBR-205ENST00000535739 TMEM132BQ14DG7 1078 aa24.72■■□□□ 1.55
LTBR-205ENST00000535739 TSHZ3Q63HK5 1081 aa24.72■■□□□ 1.55
LTBR-205ENST00000535739 FBXO28Q9NVF7 368 aa24.72■■□□□ 1.55
LTBR-205ENST00000535739 GREB1LQ9C091 1923 aaPredicted RBP24.72■■□□□ 1.55
LTBR-205ENST00000535739 STK11IPQ8N1F8 1099 aa24.71■■□□□ 1.55
LTBR-205ENST00000535739 UBE2OQ9C0C9 1292 aaKnown RBP24.71■■□□□ 1.55
LTBR-205ENST00000535739 DCTPP1Q9H773 170 aa24.71■■□□□ 1.55
LTBR-205ENST00000535739 ARPP21Q9UBL0 812 aaPredicted RBP24.71■■□□□ 1.55
LTBR-205ENST00000535739 PLXNA1Q9UIW2 1896 aa24.7■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms