RNA–Protein interactions for RNA: ENST00000533996.5

SOX9-AS1-213, SOX9 antisense RNA 1, humanhuman

TSL 5

Gene SOX9-AS1, Length 1,001 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-213ENST00000533996 GRB14Q14449 540 aa11.46□□□□□ -0.57
SOX9-AS1-213ENST00000533996 GJC2Q5T442 439 aaPredicted RBP11.46□□□□□ -0.57
SOX9-AS1-213ENST00000533996 OLFML2BQ68BL8 750 aa11.46□□□□□ -0.57
SOX9-AS1-213ENST00000533996 LBX2Q6XYB7 198 aa11.46□□□□□ -0.57
SOX9-AS1-213ENST00000533996 USP38Q8NB14 1042 aa11.46□□□□□ -0.57
SOX9-AS1-213ENST00000533996 TRIM43Q96BQ3 446 aaPredicted RBP11.46□□□□□ -0.57
SOX9-AS1-213ENST00000533996 C12orf42Q96LP6 360 aa11.46□□□□□ -0.57
SOX9-AS1-213ENST00000533996 GAS2L1Q99501 681 aaPredicted RBP11.46□□□□□ -0.57
SOX9-AS1-213ENST00000533996 C1QTNF1Q9BXJ1 281 aa11.46□□□□□ -0.57
SOX9-AS1-213ENST00000533996 ZNF576Q9H609 170 aa11.46□□□□□ -0.57
SOX9-AS1-213ENST00000533996 THEGQ9P2T0 379 aa11.46□□□□□ -0.57
SOX9-AS1-213ENST00000533996 SIPA1L1O43166 1804 aa11.45□□□□□ -0.58
SOX9-AS1-213ENST00000533996 ZNF236Q9UL36 1845 aa11.45□□□□□ -0.58
SOX9-AS1-213ENST00000533996 USP17L15C9J2P7 530 aa11.45□□□□□ -0.58
SOX9-AS1-213ENST00000533996 USP17L13C9JLJ4 530 aa11.45□□□□□ -0.58
SOX9-AS1-213ENST00000533996 USP17L11C9JVI0 530 aa11.45□□□□□ -0.58
SOX9-AS1-213ENST00000533996 USP17L18D6R9N7 530 aa11.45□□□□□ -0.58
SOX9-AS1-213ENST00000533996 USP17L22D6RA61 530 aa11.45□□□□□ -0.58
SOX9-AS1-213ENST00000533996 USP17L17D6RBQ6 530 aa11.45□□□□□ -0.58
SOX9-AS1-213ENST00000533996 USP17L19D6RCP7 530 aa11.45□□□□□ -0.58
SOX9-AS1-213ENST00000533996 USP17L20D6RJB6 530 aa11.45□□□□□ -0.58
SOX9-AS1-213ENST00000533996 SEPT4O43236 478 aa11.45□□□□□ -0.58
SOX9-AS1-213ENST00000533996 STRNO43815 780 aa11.45□□□□□ -0.58
SOX9-AS1-213ENST00000533996 USP17L24Q0WX57 530 aa11.45□□□□□ -0.58
SOX9-AS1-213ENST00000533996 TRIM60Q495X7 471 aa11.45□□□□□ -0.58
SOX9-AS1-213ENST00000533996 POTEEQ6S8J3 1075 aa11.45□□□□□ -0.58
SOX9-AS1-213ENST00000533996 TRPV1Q8NER1 839 aa11.45□□□□□ -0.58
SOX9-AS1-213ENST00000533996 NPLOC4Q8TAT6 608 aa11.45□□□□□ -0.58
SOX9-AS1-213ENST00000533996 NSUN4Q96CB9 384 aaKnown RBP11.45□□□□□ -0.58
SOX9-AS1-213ENST00000533996 UHRF1Q96T88 793 aaPredicted RBP11.45□□□□□ -0.58
SOX9-AS1-213ENST00000533996 KIAA0355O15063 1070 aa11.44□□□□□ -0.58
SOX9-AS1-213ENST00000533996 ZMYND10O75800 440 aa11.44□□□□□ -0.58
SOX9-AS1-213ENST00000533996 CNMDO75829 334 aa11.44□□□□□ -0.58
SOX9-AS1-213ENST00000533996 CYP2C19P33261 490 aa11.44□□□□□ -0.58
SOX9-AS1-213ENST00000533996 USP14P54578 494 aa11.44□□□□□ -0.58
SOX9-AS1-213ENST00000533996 SH3RF1Q7Z6J0 888 aa11.44□□□□□ -0.58
SOX9-AS1-213ENST00000533996 TEX11Q8IYF3 940 aa11.44□□□□□ -0.58
SOX9-AS1-213ENST00000533996 IL27Q8NEV9 243 aa11.44□□□□□ -0.58
SOX9-AS1-213ENST00000533996 ADAMTS19Q8TE59 1207 aa11.44□□□□□ -0.58
SOX9-AS1-213ENST00000533996 ZNF384Q8TF68 577 aa11.44□□□□□ -0.58
SOX9-AS1-213ENST00000533996 NOL10Q9BSC4 688 aaKnown RBP11.44□□□□□ -0.58
SOX9-AS1-213ENST00000533996 SIL1Q9H173 461 aa11.44□□□□□ -0.58
SOX9-AS1-213ENST00000533996 HDAC5Q9UQL6 1122 aa11.44□□□□□ -0.58
SOX9-AS1-213ENST00000533996 AKAP2Q9Y2D5 859 aa11.44□□□□□ -0.58
SOX9-AS1-213ENST00000533996 FOCADQ5VW36 1801 aa11.44□□□□□ -0.58
SOX9-AS1-213ENST00000533996 CLTBP09497 229 aa11.43□□□□□ -0.58
SOX9-AS1-213ENST00000533996 RAG1P15918 1043 aa11.43□□□□□ -0.58
SOX9-AS1-213ENST00000533996 ADCYAP1R1P41586 468 aa11.43□□□□□ -0.58
SOX9-AS1-213ENST00000533996 FPGSQ05932 587 aa11.43□□□□□ -0.58
SOX9-AS1-213ENST00000533996 MVPQ14764 893 aaKnown RBP11.43□□□□□ -0.58
SOX9-AS1-213ENST00000533996 WDR78Q5VTH9 848 aa11.43□□□□□ -0.58
SOX9-AS1-213ENST00000533996 CATSPERGQ6ZRH7 1159 aa11.43□□□□□ -0.58
SOX9-AS1-213ENST00000533996 DPP9Q86TI2 863 aa11.43□□□□□ -0.58
SOX9-AS1-213ENST00000533996 CRACR2BQ8N4Y2 399 aaPredicted RBP11.43□□□□□ -0.58
SOX9-AS1-213ENST00000533996 DDX12PQ92771 950 aa11.43□□□□□ -0.58
SOX9-AS1-213ENST00000533996 TIFAQ96CG3 184 aa11.43□□□□□ -0.58
SOX9-AS1-213ENST00000533996 TRIM34Q9BYJ4 488 aa11.43□□□□□ -0.58
SOX9-AS1-213ENST00000533996 SLC5A4Q9NY91 659 aa11.43□□□□□ -0.58
SOX9-AS1-213ENST00000533996 PCDHGA4Q9Y5G9 962 aa11.43□□□□□ -0.58
SOX9-AS1-213ENST00000533996 CDK5RAP2Q96SN8 1893 aa11.42□□□□□ -0.58
SOX9-AS1-213ENST00000533996 IGSF3O75054 1194 aa11.42□□□□□ -0.58
SOX9-AS1-213ENST00000533996 BAG3O95817 575 aa11.42□□□□□ -0.58
SOX9-AS1-213ENST00000533996 ITGB8P26012 769 aa11.42□□□□□ -0.58
SOX9-AS1-213ENST00000533996 ADORA1P30542 326 aa11.42□□□□□ -0.58
SOX9-AS1-213ENST00000533996 TIMM10P62072 90 aa11.42□□□□□ -0.58
SOX9-AS1-213ENST00000533996 JAG1P78504 1218 aa11.42□□□□□ -0.58
SOX9-AS1-213ENST00000533996 TLE2Q04725 743 aa11.42□□□□□ -0.58
SOX9-AS1-213ENST00000533996 LRRC41Q15345 812 aa11.42□□□□□ -0.58
SOX9-AS1-213ENST00000533996 ATF7IPQ6VMQ6 1270 aa11.42□□□□□ -0.58
SOX9-AS1-213ENST00000533996 MRPL50Q8N5N7 158 aaKnown RBP11.42□□□□□ -0.58
SOX9-AS1-213ENST00000533996 COPRSQ9NQ92 184 aa11.42□□□□□ -0.58
SOX9-AS1-213ENST00000533996 ZBTB21Q9ULJ3 1066 aa11.42□□□□□ -0.58
SOX9-AS1-213ENST00000533996 PHF24Q9UPV7 400 aa11.42□□□□□ -0.58
SOX9-AS1-213ENST00000533996 PLXNA1Q9UIW2 1896 aa11.41□□□□□ -0.58
SOX9-AS1-213ENST00000533996 EPHB4P54760 987 aa11.41□□□□□ -0.58
SOX9-AS1-213ENST00000533996 PPP4CP60510 307 aa11.41□□□□□ -0.58
SOX9-AS1-213ENST00000533996 CCDC174Q6PII3 467 aa11.41□□□□□ -0.58
SOX9-AS1-213ENST00000533996 XAGE2Q96GT9 111 aa11.41□□□□□ -0.58
SOX9-AS1-213ENST00000533996 TOX2Q96NM4 488 aa11.41□□□□□ -0.58
SOX9-AS1-213ENST00000533996 DNAJC18Q9H819 358 aa11.41□□□□□ -0.58
SOX9-AS1-213ENST00000533996 BTBD7Q9P203 1132 aa11.41□□□□□ -0.58
SOX9-AS1-213ENST00000533996 NRBP1Q9UHY1 535 aa11.41□□□□□ -0.58
SOX9-AS1-213ENST00000533996 NDUFB9Q9Y6M9 179 aa11.41□□□□□ -0.58
SOX9-AS1-213ENST00000533996 A0A1B0GUL7 405 aa11.4□□□□□ -0.58
SOX9-AS1-213ENST00000533996 HLA-DOAP06340 250 aa11.4□□□□□ -0.58
SOX9-AS1-213ENST00000533996 ADORA2AP29274 412 aa11.4□□□□□ -0.58
SOX9-AS1-213ENST00000533996 ANKRD33Q7Z3H0 272 aa11.4□□□□□ -0.58
SOX9-AS1-213ENST00000533996 RNF180Q86T96 592 aa11.4□□□□□ -0.58
SOX9-AS1-213ENST00000533996 SPATA5Q8NB90 893 aa11.4□□□□□ -0.58
SOX9-AS1-213ENST00000533996 SHCBP1Q8NEM2 672 aa11.4□□□□□ -0.58
SOX9-AS1-213ENST00000533996 SH3RF3Q8TEJ3 882 aaPredicted RBP11.4□□□□□ -0.58
SOX9-AS1-213ENST00000533996 PPM1EQ8WY54 764 aa11.4□□□□□ -0.58
SOX9-AS1-213ENST00000533996 FERMT2Q96AC1 680 aa11.4□□□□□ -0.58
SOX9-AS1-213ENST00000533996 KIAA1683Q9H0B3 1180 aa11.4□□□□□ -0.58
SOX9-AS1-213ENST00000533996 TMEM39AQ9NV64 488 aa11.4□□□□□ -0.58
SOX9-AS1-213ENST00000533996 RAI14Q9P0K7 980 aa11.4□□□□□ -0.58
SOX9-AS1-213ENST00000533996 HMG20BQ9P0W2 317 aa11.4□□□□□ -0.58
SOX9-AS1-213ENST00000533996 HCN4Q9Y3Q4 1203 aa11.4□□□□□ -0.58
SOX9-AS1-213ENST00000533996 ZNFX1Q9P2E3 1918 aaKnown RBP11.4□□□□□ -0.58
SOX9-AS1-213ENST00000533996 SMCHD1A6NHR9 2005 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms