RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 ALDH1B1P30837 517 aa11.16□□□□□ -0.62
CHKA-207ENST00000533728 CTDSPL2Q05D32 466 aa11.16□□□□□ -0.62
CHKA-207ENST00000533728 GRAPQ13588 217 aa11.16□□□□□ -0.62
CHKA-207ENST00000533728 SLC39A14Q15043 492 aa11.16□□□□□ -0.62
CHKA-207ENST00000533728 SEC23AQ15436 765 aa11.16□□□□□ -0.62
CHKA-207ENST00000533728 STX1AQ16623 288 aa11.16□□□□□ -0.62
CHKA-207ENST00000533728 SLC4A8Q2Y0W8 1093 aa11.16□□□□□ -0.62
CHKA-207ENST00000533728 KRT40Q6A162 431 aa11.16□□□□□ -0.62
CHKA-207ENST00000533728 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.16□□□□□ -0.62
CHKA-207ENST00000533728 TMC4Q7Z404 712 aa11.16□□□□□ -0.62
CHKA-207ENST00000533728 FMR1NBQ8N0W7 255 aaPredicted RBP11.16□□□□□ -0.62
CHKA-207ENST00000533728 FSIP1Q8NA03 581 aa11.16□□□□□ -0.62
CHKA-207ENST00000533728 WDR66Q8TBY9 1149 aa11.16□□□□□ -0.62
CHKA-207ENST00000533728 GRAPLQ8TC17 118 aaPredicted RBP11.16□□□□□ -0.62
CHKA-207ENST00000533728 NSUN4Q96CB9 384 aaKnown RBP11.16□□□□□ -0.62
CHKA-207ENST00000533728 UBAC1Q9BSL1 405 aa11.16□□□□□ -0.62
CHKA-207ENST00000533728 RNF26Q9BY78 433 aaPredicted RBP11.16□□□□□ -0.62
CHKA-207ENST00000533728 CRNKL1Q9BZJ0 848 aaKnown RBP11.16□□□□□ -0.62
CHKA-207ENST00000533728 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.16□□□□□ -0.62
CHKA-207ENST00000533728 RBM28Q9NW13 759 aaKnown RBP11.16□□□□□ -0.62
CHKA-207ENST00000533728 GPRC5DQ9NZD1 345 aa11.16□□□□□ -0.62
CHKA-207ENST00000533728 PCDHA7Q9UN72 937 aa11.16□□□□□ -0.62
CHKA-207ENST00000533728 XDHP47989 1333 aa11.15□□□□□ -0.62
CHKA-207ENST00000533728 CHD8Q9HCK8 2581 aa11.15□□□□□ -0.62
CHKA-207ENST00000533728 OFD1O75665 1012 aa11.15□□□□□ -0.62
CHKA-207ENST00000533728 DDAH1O94760 285 aa11.15□□□□□ -0.62
CHKA-207ENST00000533728 ME1P48163 572 aa11.15□□□□□ -0.62
CHKA-207ENST00000533728 GSTO1P78417 241 aa11.15□□□□□ -0.62
CHKA-207ENST00000533728 SAFBQ15424 915 aaKnown RBP eCLIP11.15□□□□□ -0.62
CHKA-207ENST00000533728 SF3A1Q15459 793 aaKnown RBP11.15□□□□□ -0.62
CHKA-207ENST00000533728 CCDC178Q5BJE1 867 aa11.15□□□□□ -0.62
CHKA-207ENST00000533728 SARM1Q6SZW1 724 aa11.15□□□□□ -0.62
CHKA-207ENST00000533728 ADGRA1Q86SQ6 560 aa11.15□□□□□ -0.62
CHKA-207ENST00000533728 MICU3Q86XE3 530 aa11.15□□□□□ -0.62
CHKA-207ENST00000533728 RASAL3Q86YV0 1011 aa11.15□□□□□ -0.62
CHKA-207ENST00000533728 ZNF654Q8IZM8 581 aa11.15□□□□□ -0.62
CHKA-207ENST00000533728 ZNF333Q96JL9 665 aa11.15□□□□□ -0.62
CHKA-207ENST00000533728 P2RX7Q99572 595 aaKnown RBP11.15□□□□□ -0.62
CHKA-207ENST00000533728 BPIFA3Q9BQP9 254 aa11.15□□□□□ -0.62
CHKA-207ENST00000533728 FOXP1Q9H334 677 aaPredicted RBP11.15□□□□□ -0.62
CHKA-207ENST00000533728 ANO10Q9NW15 660 aa11.15□□□□□ -0.62
CHKA-207ENST00000533728 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.15□□□□□ -0.62
CHKA-207ENST00000533728 ARPP21Q9UBL0 812 aaPredicted RBP11.15□□□□□ -0.62
CHKA-207ENST00000533728 ABCF2Q9UG63 623 aa11.15□□□□□ -0.62
CHKA-207ENST00000533728 PTPN22Q9Y2R2 807 aa11.15□□□□□ -0.62
CHKA-207ENST00000533728 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.15□□□□□ -0.62
CHKA-207ENST00000533728 TACC3Q9Y6A5 838 aa11.15□□□□□ -0.62
CHKA-207ENST00000533728 WTIPA6NIX2 430 aaPredicted RBP11.14□□□□□ -0.63
CHKA-207ENST00000533728 PTMAP06454 111 aaKnown RBP11.14□□□□□ -0.63
CHKA-207ENST00000533728 CDC25BP30305 580 aa11.14□□□□□ -0.63
CHKA-207ENST00000533728 PPP4CP60510 307 aa11.14□□□□□ -0.63
CHKA-207ENST00000533728 GUCY1B3Q02153 619 aa11.14□□□□□ -0.63
CHKA-207ENST00000533728 ANO6Q4KMQ2 910 aa11.14□□□□□ -0.63
CHKA-207ENST00000533728 GRIPAP1Q4V328 841 aa11.14□□□□□ -0.63
CHKA-207ENST00000533728 CC2D2BQ6DHV5 1058 aa11.14□□□□□ -0.63
CHKA-207ENST00000533728 DLK2Q6UY11 383 aa11.14□□□□□ -0.63
CHKA-207ENST00000533728 NBPF11Q86T75 865 aa11.14□□□□□ -0.63
CHKA-207ENST00000533728 IQCA1Q86XH1 822 aa11.14□□□□□ -0.63
CHKA-207ENST00000533728 RTKN2Q8IZC4 609 aa11.14□□□□□ -0.63
CHKA-207ENST00000533728 FAM177A1Q8N128 213 aaPredicted RBP11.14□□□□□ -0.63
CHKA-207ENST00000533728 CRACR2BQ8N4Y2 399 aaPredicted RBP11.14□□□□□ -0.63
CHKA-207ENST00000533728 FANCBQ8NB91 859 aa11.14□□□□□ -0.63
CHKA-207ENST00000533728 MAP3K14Q99558 947 aa11.14□□□□□ -0.63
CHKA-207ENST00000533728 NAT10Q9H0A0 1025 aaKnown RBP11.14□□□□□ -0.63
CHKA-207ENST00000533728 CBX8Q9HC52 389 aa11.14□□□□□ -0.63
CHKA-207ENST00000533728 HCN4Q9Y3Q4 1203 aa11.14□□□□□ -0.63
CHKA-207ENST00000533728 ROBO3Q96MS0 1386 aa11.14□□□□□ -0.63
CHKA-207ENST00000533728 COL4A5P29400 1685 aa11.14□□□□□ -0.63
CHKA-207ENST00000533728 KIF28PB7ZC32 967 aa11.13□□□□□ -0.63
CHKA-207ENST00000533728 RANBP6O60518 1105 aaKnown RBP11.13□□□□□ -0.63
CHKA-207ENST00000533728 CUTAO60888 179 aa11.13□□□□□ -0.63
CHKA-207ENST00000533728 BBOX1O75936 387 aa11.13□□□□□ -0.63
CHKA-207ENST00000533728 MMP1P03956 469 aa11.13□□□□□ -0.63
CHKA-207ENST00000533728 LDHCP07864 332 aa11.13□□□□□ -0.63
CHKA-207ENST00000533728 XBP1P17861 261 aa11.13□□□□□ -0.63
CHKA-207ENST00000533728 ZNF165P49910 485 aa11.13□□□□□ -0.63
CHKA-207ENST00000533728 MECOMQ03112 1051 aa11.13□□□□□ -0.63
CHKA-207ENST00000533728 PTPAQ15257 358 aa11.13□□□□□ -0.63
CHKA-207ENST00000533728 CAMK4Q16566 473 aa11.13□□□□□ -0.63
CHKA-207ENST00000533728 RILPL1Q5EBL4 403 aa11.13□□□□□ -0.63
CHKA-207ENST00000533728 AXDND1Q5T1B0 1012 aaPredicted RBP11.13□□□□□ -0.63
CHKA-207ENST00000533728 MIGA1Q8NAN2 632 aa11.13□□□□□ -0.63
CHKA-207ENST00000533728 NKX2-3Q8TAU0 364 aa11.13□□□□□ -0.63
CHKA-207ENST00000533728 ZNF384Q8TF68 577 aa11.13□□□□□ -0.63
CHKA-207ENST00000533728 ANKS1AQ92625 1134 aa11.13□□□□□ -0.63
CHKA-207ENST00000533728 RBM17Q96I25 401 aaKnown RBP11.13□□□□□ -0.63
CHKA-207ENST00000533728 ZSCAN10Q96SZ4 725 aaPredicted RBP11.13□□□□□ -0.63
CHKA-207ENST00000533728 HTATIP2Q9BUP3 242 aa11.13□□□□□ -0.63
CHKA-207ENST00000533728 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.13□□□□□ -0.63
CHKA-207ENST00000533728 GOLPH3LQ9H4A5 285 aa11.13□□□□□ -0.63
CHKA-207ENST00000533728 SENP2Q9HC62 589 aa11.13□□□□□ -0.63
CHKA-207ENST00000533728 CLIC4Q9Y696 253 aa11.13□□□□□ -0.63
CHKA-207ENST00000533728 TNKSO95271 1327 aa11.12□□□□□ -0.63
CHKA-207ENST00000533728 ZNF646O15015 1829 aaPredicted RBP11.12□□□□□ -0.63
CHKA-207ENST00000533728 NPHP1O15259 732 aa11.12□□□□□ -0.63
CHKA-207ENST00000533728 PRPF3O43395 683 aaKnown RBP11.12□□□□□ -0.63
CHKA-207ENST00000533728 ATP2B4P23634 1241 aa11.12□□□□□ -0.63
CHKA-207ENST00000533728 FOSBP53539 338 aa11.12□□□□□ -0.63
CHKA-207ENST00000533728 KIAA2012Q0VF49 1180 aa11.12□□□□□ -0.63
CHKA-207ENST00000533728 DHX8Q14562 1220 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms