RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 TCP10L2B9ZVM9 353 aa13.94□□□□□ -0.18
RAD50-209ENST00000533482 SH2B2O14492 632 aaPredicted RBP13.94□□□□□ -0.18
RAD50-209ENST00000533482 TACC1O75410 805 aa13.94□□□□□ -0.18
RAD50-209ENST00000533482 RNASE9P60153 205 aaKnown RBP13.94□□□□□ -0.18
RAD50-209ENST00000533482 SNX29Q8TEQ0 813 aa13.94□□□□□ -0.18
RAD50-209ENST00000533482 FERMT2Q96AC1 680 aa13.94□□□□□ -0.18
RAD50-209ENST00000533482 FRMPD1Q5SYB0 1578 aa13.94□□□□□ -0.18
RAD50-209ENST00000533482 POTEB2H3BUK9 544 aa13.93□□□□□ -0.18
RAD50-209ENST00000533482 PLCD1P51178 756 aa13.93□□□□□ -0.18
RAD50-209ENST00000533482 RBM6P78332 1123 aaKnown RBP13.93□□□□□ -0.18
RAD50-209ENST00000533482 KRT83P78385 493 aa13.93□□□□□ -0.18
RAD50-209ENST00000533482 SPICE1Q8N0Z3 855 aa13.93□□□□□ -0.18
RAD50-209ENST00000533482 CEP112Q8N8E3 955 aa13.93□□□□□ -0.18
RAD50-209ENST00000533482 EHBP1Q8NDI1 1231 aa13.93□□□□□ -0.18
RAD50-209ENST00000533482 LRRC27Q9C0I9 530 aa13.93□□□□□ -0.18
RAD50-209ENST00000533482 BICDL2A1A5D9 508 aa13.93□□□□□ -0.18
RAD50-209ENST00000533482 CYP2D6P10635 497 aa13.93□□□□□ -0.18
RAD50-209ENST00000533482 MECOMQ03112 1051 aa13.93□□□□□ -0.18
RAD50-209ENST00000533482 SYMPKQ92797 1274 aaKnown RBP13.93□□□□□ -0.18
RAD50-209ENST00000533482 CPVLQ9H3G5 476 aa13.93□□□□□ -0.18
RAD50-209ENST00000533482 ALDH1B1P30837 517 aa13.93□□□□□ -0.18
RAD50-209ENST00000533482 CCDC174Q6PII3 467 aa13.93□□□□□ -0.18
RAD50-209ENST00000533482 NEK11Q8NG66 645 aa13.93□□□□□ -0.18
RAD50-209ENST00000533482 CLRN2A0PK11 232 aa13.92□□□□□ -0.18
RAD50-209ENST00000533482 ATP2B4P23634 1241 aa13.92□□□□□ -0.18
RAD50-209ENST00000533482 PPP2R5BQ15173 497 aa13.92□□□□□ -0.18
RAD50-209ENST00000533482 DNAJC21Q5F1R6 531 aaKnown RBP13.92□□□□□ -0.18
RAD50-209ENST00000533482 DCAF17Q5H9S7 520 aaPredicted RBP13.92□□□□□ -0.18
RAD50-209ENST00000533482 OGFRQ9NZT2 677 aa13.92□□□□□ -0.18
RAD50-209ENST00000533482 CLEC11AQ9Y240 323 aa13.92□□□□□ -0.18
RAD50-209ENST00000533482 PCDHB6Q9Y5E3 794 aa13.92□□□□□ -0.18
RAD50-209ENST00000533482 MROH2AA6NES4 1674 aa13.92□□□□□ -0.18
RAD50-209ENST00000533482 USP17L3A6NCW0 530 aa13.92□□□□□ -0.18
RAD50-209ENST00000533482 USP17L4A6NCW7 530 aa13.92□□□□□ -0.18
RAD50-209ENST00000533482 WDHD1O75717 1129 aaPredicted RBP13.92□□□□□ -0.18
RAD50-209ENST00000533482 NEFHP12036 1026 aa13.92□□□□□ -0.18
RAD50-209ENST00000533482 SCG2P13521 617 aa13.92□□□□□ -0.18
RAD50-209ENST00000533482 CACNB3P54284 484 aa13.92□□□□□ -0.18
RAD50-209ENST00000533482 USP17L1Q7RTZ2 530 aa13.92□□□□□ -0.18
RAD50-209ENST00000533482 NELFCDQ8IXH7 590 aa13.92□□□□□ -0.18
RAD50-209ENST00000533482 GOLPH3LQ9H4A5 285 aa13.92□□□□□ -0.18
RAD50-209ENST00000533482 CEP170BQ9Y4F5 1589 aaPredicted RBP13.92□□□□□ -0.18
RAD50-209ENST00000533482 XDHP47989 1333 aa13.92□□□□□ -0.18
RAD50-209ENST00000533482 TUBB4AP04350 444 aa13.92□□□□□ -0.18
RAD50-209ENST00000533482 PPARDQ03181 441 aa13.92□□□□□ -0.18
RAD50-209ENST00000533482 DLGAP5Q15398 846 aa13.92□□□□□ -0.18
RAD50-209ENST00000533482 CYB5R4Q7L1T6 521 aa13.92□□□□□ -0.18
RAD50-209ENST00000533482 KRT27Q7Z3Y8 459 aa13.92□□□□□ -0.18
RAD50-209ENST00000533482 MAATS1Q7Z4T9 603 aa13.92□□□□□ -0.18
RAD50-209ENST00000533482 CTNNBL1Q8WYA6 563 aaPredicted RBP13.92□□□□□ -0.18
RAD50-209ENST00000533482 MINPP1Q9UNW1 487 aa13.92□□□□□ -0.18
RAD50-209ENST00000533482 ZC3H13Q5T200 1668 aaKnown RBP13.92□□□□□ -0.18
RAD50-209ENST00000533482 MCM3P25205 808 aa13.92□□□□□ -0.18
RAD50-209ENST00000533482 TECP42680 631 aa13.92□□□□□ -0.18
RAD50-209ENST00000533482 ADCY7P51828 1080 aa13.92□□□□□ -0.18
RAD50-209ENST00000533482 IFFO1Q0D2I5 559 aa13.92□□□□□ -0.18
RAD50-209ENST00000533482 NCAPH2Q6IBW4 605 aa13.92□□□□□ -0.18
RAD50-209ENST00000533482 BLIDQ8IZY5 108 aa13.92□□□□□ -0.18
RAD50-209ENST00000533482 PDLIM2Q96JY6 352 aa13.92□□□□□ -0.18
RAD50-209ENST00000533482 TCHPQ9BT92 498 aa13.92□□□□□ -0.18
RAD50-209ENST00000533482 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.92□□□□□ -0.182e-9■■■■■ 37.3
RAD50-209ENST00000533482 ETF1P62495 437 aaKnown RBP13.91□□□□□ -0.18
RAD50-209ENST00000533482 CETN1Q12798 172 aa13.91□□□□□ -0.18
RAD50-209ENST00000533482 PPP4R3AQ6IN85 833 aa13.91□□□□□ -0.18
RAD50-209ENST00000533482 NSMFQ6X4W1 530 aa13.91□□□□□ -0.18
RAD50-209ENST00000533482 KAZALD1Q96I82 304 aa13.91□□□□□ -0.18
RAD50-209ENST00000533482 GDAP1L1Q96MZ0 367 aa13.91□□□□□ -0.18
RAD50-209ENST00000533482 CD163L1Q9NR16 1453 aa13.91□□□□□ -0.18
RAD50-209ENST00000533482 FAM13AO94988 1023 aa13.91□□□□□ -0.18
RAD50-209ENST00000533482 CABP7Q86V35 215 aa13.91□□□□□ -0.18
RAD50-209ENST00000533482 ARHGEF1Q92888 912 aaKnown RBP13.91□□□□□ -0.18
RAD50-209ENST00000533482 KIFC2Q96AC6 838 aa13.91□□□□□ -0.18
RAD50-209ENST00000533482 FAM207AQ9NSI2 230 aaPredicted RBP13.91□□□□□ -0.18
RAD50-209ENST00000533482 VPS18Q9P253 973 aa13.91□□□□□ -0.18
RAD50-209ENST00000533482 BCS1LQ9Y276 419 aa13.91□□□□□ -0.18
RAD50-209ENST00000533482 SLC16A2P36021 539 aa13.91□□□□□ -0.18
RAD50-209ENST00000533482 HERC4Q5GLZ8 1057 aaPredicted RBP13.91□□□□□ -0.18
RAD50-209ENST00000533482 NLGN1Q8N2Q7 840 aa13.91□□□□□ -0.18
RAD50-209ENST00000533482 SLC44A5Q8NCS7 719 aa13.91□□□□□ -0.18
RAD50-209ENST00000533482 DLC1Q96QB1 1528 aa13.91□□□□□ -0.18
RAD50-209ENST00000533482 NMT2O60551 498 aa13.9□□□□□ -0.18
RAD50-209ENST00000533482 CASP1P29466 404 aa13.9□□□□□ -0.18
RAD50-209ENST00000533482 DDIT3P35638 169 aa13.9□□□□□ -0.18
RAD50-209ENST00000533482 RAPGEF1Q13905 1077 aa13.9□□□□□ -0.18
RAD50-209ENST00000533482 USP17L2Q6R6M4 530 aa13.9□□□□□ -0.18
RAD50-209ENST00000533482 EPSTI1Q96J88 318 aa13.9□□□□□ -0.18
RAD50-209ENST00000533482 HINFPQ9BQA5 517 aa13.9□□□□□ -0.18
RAD50-209ENST00000533482 IFNAR1P17181 557 aa13.9□□□□□ -0.18
RAD50-209ENST00000533482 ATP8A2Q9NTI2 1148 aa13.9□□□□□ -0.18
RAD50-209ENST00000533482 RPAP1Q9BWH6 1393 aaPredicted RBP13.9□□□□□ -0.18
RAD50-209ENST00000533482 AGLP35573 1532 aa13.9□□□□□ -0.18
RAD50-209ENST00000533482 BACH1O14867 736 aa13.9□□□□□ -0.18
RAD50-209ENST00000533482 MMP10P09238 476 aa13.9□□□□□ -0.18
RAD50-209ENST00000533482 CALCRLQ16602 461 aa13.9□□□□□ -0.18
RAD50-209ENST00000533482 NAA15Q9BXJ9 866 aaKnown RBP13.9□□□□□ -0.18
RAD50-209ENST00000533482 CALCOCO1Q9P1Z2 691 aa13.9□□□□□ -0.18
RAD50-209ENST00000533482 PREX1Q8TCU6 1659 aa13.9□□□□□ -0.18
RAD50-209ENST00000533482 DIP2AQ14689 1571 aa13.9□□□□□ -0.18
RAD50-209ENST00000533482 RPS6KA4O75676 772 aa13.9□□□□□ -0.19
RAD50-209ENST00000533482 MYCLP12524 364 aaPredicted RBP13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms