RNA–Protein interactions for RNA: ENST00000533413.5

CKAP5-212, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best)

Gene CKAP5, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-212ENST00000533413 DTNBO60941 627 aa6.17□□□□□ -1.42
CKAP5-212ENST00000533413 DDX58O95786 925 aaKnown RBP6.17□□□□□ -1.42
CKAP5-212ENST00000533413 ZNF165P49910 485 aa6.17□□□□□ -1.42
CKAP5-212ENST00000533413 ZNF75DP51815 510 aa6.17□□□□□ -1.42
CKAP5-212ENST00000533413 ME3Q16798 604 aa6.17□□□□□ -1.42
CKAP5-212ENST00000533413 C11orf91Q3C1V1 193 aa6.17□□□□□ -1.42
CKAP5-212ENST00000533413 SPECC1Q5M775 1068 aa6.17□□□□□ -1.42
CKAP5-212ENST00000533413 ERC1Q8IUD2 1116 aa6.17□□□□□ -1.42
CKAP5-212ENST00000533413 PLPP6Q8IY26 295 aa6.17□□□□□ -1.42
CKAP5-212ENST00000533413 UCN2Q96RP3 112 aa6.17□□□□□ -1.42
CKAP5-212ENST00000533413 NBPF3Q9H094 633 aa6.17□□□□□ -1.42
CKAP5-212ENST00000533413 RASSF4Q9H2L5 321 aa6.17□□□□□ -1.42
CKAP5-212ENST00000533413 CLIP2Q9UDT6 1046 aa6.17□□□□□ -1.42
CKAP5-212ENST00000533413 ELP1O95163 1332 aa6.17□□□□□ -1.42
CKAP5-212ENST00000533413 CHD4Q14839 1912 aa6.17□□□□□ -1.42
CKAP5-212ENST00000533413 CAVIN2O95810 425 aa6.17□□□□□ -1.42
CKAP5-212ENST00000533413 IL4RP24394 825 aa6.17□□□□□ -1.42
CKAP5-212ENST00000533413 CDC27P30260 824 aa6.17□□□□□ -1.42
CKAP5-212ENST00000533413 ZNF131P52739 623 aa6.17□□□□□ -1.42
CKAP5-212ENST00000533413 ST5P78524 1137 aa6.17□□□□□ -1.42
CKAP5-212ENST00000533413 PTH1RQ03431 593 aa6.17□□□□□ -1.42
CKAP5-212ENST00000533413 LRMPQ12912 555 aa6.17□□□□□ -1.42
CKAP5-212ENST00000533413 PDIA6Q15084 440 aa6.17□□□□□ -1.42
CKAP5-212ENST00000533413 ADCK5Q3MIX3 580 aa6.17□□□□□ -1.42
CKAP5-212ENST00000533413 INO80DQ53TQ3 878 aaPredicted RBP6.17□□□□□ -1.42
CKAP5-212ENST00000533413 BLOC1S2Q6QNY1 142 aa6.17□□□□□ -1.42
CKAP5-212ENST00000533413 KRT77Q7Z794 578 aa6.17□□□□□ -1.42
CKAP5-212ENST00000533413 C14orf80Q86SX3 495 aa6.17□□□□□ -1.42
CKAP5-212ENST00000533413 IQUBQ8NA54 791 aa6.17□□□□□ -1.42
CKAP5-212ENST00000533413 SETDB2Q96T68 719 aa6.17□□□□□ -1.42
CKAP5-212ENST00000533413 DNAJC25Q9H1X3 360 aa6.17□□□□□ -1.42
CKAP5-212ENST00000533413 POLG2Q9UHN1 485 aa6.17□□□□□ -1.42
CKAP5-212ENST00000533413 RBM8AQ9Y5S9 174 aaKnown RBP6.17□□□□□ -1.42
CKAP5-212ENST00000533413 COL11A2P13942 1736 aaPredicted RBP6.16□□□□□ -1.42
CKAP5-212ENST00000533413 PABPN1LA6NDY0 278 aaKnown RBP6.16□□□□□ -1.42
CKAP5-212ENST00000533413 H3BQV1 296 aa6.16□□□□□ -1.42
CKAP5-212ENST00000533413 GTF2A1P52655 376 aaPredicted RBP6.16□□□□□ -1.42
CKAP5-212ENST00000533413 ZNF132P52740 706 aa6.16□□□□□ -1.42
CKAP5-212ENST00000533413 CCDC15Q0P6D6 951 aa6.16□□□□□ -1.42
CKAP5-212ENST00000533413 IFFO2Q5TF58 517 aa6.16□□□□□ -1.42
CKAP5-212ENST00000533413 CEP135Q66GS9 1140 aa6.16□□□□□ -1.42
CKAP5-212ENST00000533413 CREB3L3Q68CJ9 461 aa6.16□□□□□ -1.42
CKAP5-212ENST00000533413 MSL1Q68DK7 614 aa6.16□□□□□ -1.42
CKAP5-212ENST00000533413 ZSCAN25Q6NSZ9 544 aa6.16□□□□□ -1.42
CKAP5-212ENST00000533413 FAM173BQ6P4H8 233 aa6.16□□□□□ -1.42
CKAP5-212ENST00000533413 LRP10Q7Z4F1 713 aa6.16□□□□□ -1.42
CKAP5-212ENST00000533413 DNAAF4Q8WXU2 420 aa6.16□□□□□ -1.42
CKAP5-212ENST00000533413 CLSTN2Q9H4D0 955 aa6.16□□□□□ -1.42
CKAP5-212ENST00000533413 PHAXQ9H814 394 aaKnown RBP6.16□□□□□ -1.42
CKAP5-212ENST00000533413 SRP68Q9UHB9 627 aaKnown RBP6.16□□□□□ -1.42
CKAP5-212ENST00000533413 RSPH14Q9UHP6 348 aa6.16□□□□□ -1.42
CKAP5-212ENST00000533413 PRAMEF22A3QJZ6 481 aa6.16□□□□□ -1.42
CKAP5-212ENST00000533413 BECN2A8MW95 431 aa6.16□□□□□ -1.42
CKAP5-212ENST00000533413 NEMFO60524 1076 aa6.16□□□□□ -1.42
CKAP5-212ENST00000533413 INMTO95050 263 aa6.16□□□□□ -1.42
CKAP5-212ENST00000533413 NBPF7P0C2Y1 421 aaPredicted RBP6.16□□□□□ -1.42
CKAP5-212ENST00000533413 FOSL1P15407 271 aa6.16□□□□□ -1.42
CKAP5-212ENST00000533413 INHBEP58166 350 aa6.16□□□□□ -1.42
CKAP5-212ENST00000533413 RAPGEF1Q13905 1077 aa6.16□□□□□ -1.42
CKAP5-212ENST00000533413 PLBD2Q8NHP8 589 aa6.16□□□□□ -1.42
CKAP5-212ENST00000533413 TBC1D20Q96BZ9 403 aa6.16□□□□□ -1.42
CKAP5-212ENST00000533413 TBC1D31Q96DN5 1066 aa6.16□□□□□ -1.42
CKAP5-212ENST00000533413 SYT17Q9BSW7 474 aa6.16□□□□□ -1.42
CKAP5-212ENST00000533413 UBXN6Q9BZV1 441 aa6.16□□□□□ -1.42
CKAP5-212ENST00000533413 FHDC1Q9C0D6 1143 aaPredicted RBP6.16□□□□□ -1.42
CKAP5-212ENST00000533413 ARNT2Q9HBZ2 717 aa6.16□□□□□ -1.42
CKAP5-212ENST00000533413 C9orf78Q9NZ63 289 aaPredicted RBP6.16□□□□□ -1.42
CKAP5-212ENST00000533413 RABGAP1Q9Y3P9 1069 aa6.16□□□□□ -1.42
CKAP5-212ENST00000533413 CCDC171Q6TFL3 1326 aa6.16□□□□□ -1.42
CKAP5-212ENST00000533413 DDX60Q8IY21 1712 aaKnown RBP6.15□□□□□ -1.42
CKAP5-212ENST00000533413 SERPINB2P05120 415 aa6.15□□□□□ -1.42
CKAP5-212ENST00000533413 VIL1P09327 827 aaKnown RBP6.15□□□□□ -1.42
CKAP5-212ENST00000533413 NFIXQ14938 502 aa6.15□□□□□ -1.42
CKAP5-212ENST00000533413 FXNQ16595 210 aa6.15□□□□□ -1.42
CKAP5-212ENST00000533413 TAS1R3Q7RTX0 852 aa6.15□□□□□ -1.42
CKAP5-212ENST00000533413 AACSQ86V21 672 aa6.15□□□□□ -1.42
CKAP5-212ENST00000533413 IQCF2Q8IXL9 164 aa6.15□□□□□ -1.42
CKAP5-212ENST00000533413 TDRD7Q8NHU6 1098 aaKnown RBP6.15□□□□□ -1.42
CKAP5-212ENST00000533413 CENPTQ96BT3 561 aa6.15□□□□□ -1.42
CKAP5-212ENST00000533413 APBA2Q99767 749 aa6.15□□□□□ -1.42
CKAP5-212ENST00000533413 BRINP2Q9C0B6 783 aa6.15□□□□□ -1.42
CKAP5-212ENST00000533413 ZMIZ1Q9ULJ6 1067 aa6.15□□□□□ -1.42
CKAP5-212ENST00000533413 TPCN1Q9ULQ1 816 aa6.15□□□□□ -1.42
CKAP5-212ENST00000533413 MYH3P11055 1940 aa6.15□□□□□ -1.42
CKAP5-212ENST00000533413 PI4KAP2A4QPH2 592 aa6.15□□□□□ -1.43
CKAP5-212ENST00000533413 A6NCN8 305 aa6.15□□□□□ -1.43
CKAP5-212ENST00000533413 SCAMP3O14828 347 aaKnown RBP6.15□□□□□ -1.43
CKAP5-212ENST00000533413 GRIN3BO60391 1043 aa6.15□□□□□ -1.43
CKAP5-212ENST00000533413 RFC5P40937 340 aa6.15□□□□□ -1.43
CKAP5-212ENST00000533413 GEMIN4P57678 1058 aaKnown RBP6.15□□□□□ -1.43
CKAP5-212ENST00000533413 DDR1Q08345 913 aa6.15□□□□□ -1.43
CKAP5-212ENST00000533413 STK3Q13188 491 aa6.15□□□□□ -1.43
CKAP5-212ENST00000533413 PTK7Q13308 1070 aa6.15□□□□□ -1.43
CKAP5-212ENST00000533413 NECTIN1Q15223 517 aa6.15□□□□□ -1.43
CKAP5-212ENST00000533413 PTPN14Q15678 1187 aa6.15□□□□□ -1.43
CKAP5-212ENST00000533413 PI4KAP1Q8N8J0 262 aa6.15□□□□□ -1.43
CKAP5-212ENST00000533413 LEO1Q8WVC0 666 aaPredicted RBP6.15□□□□□ -1.43
CKAP5-212ENST00000533413 CDHR1Q96JP9 859 aa6.15□□□□□ -1.43
CKAP5-212ENST00000533413 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.15□□□□□ -1.43
CKAP5-212ENST00000533413 SUN2Q9UH99 717 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms