RNA–Protein interactions for RNA: ENST00000533011.5

CHMP4A-206, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-206ENST00000533011 SAP30BPQ9UHR5 308 aaKnown RBP12.26□□□□□ -0.45
CHMP4A-206ENST00000533011 DOCK1Q14185 1865 aa12.25□□□□□ -0.45
CHMP4A-206ENST00000533011 MYH7P12883 1935 aa12.25□□□□□ -0.45
CHMP4A-206ENST00000533011 MX1P20591 662 aa12.25□□□□□ -0.45
CHMP4A-206ENST00000533011 HOXA7P31268 230 aaPredicted RBP12.25□□□□□ -0.45
CHMP4A-206ENST00000533011 IRX3P78415 501 aaPredicted RBP12.25□□□□□ -0.45
CHMP4A-206ENST00000533011 SPP2Q13103 211 aa12.25□□□□□ -0.45
CHMP4A-206ENST00000533011 AAK1Q2M2I8 961 aa12.25□□□□□ -0.45
CHMP4A-206ENST00000533011 SLC39A5Q6ZMH5 540 aa12.25□□□□□ -0.45
CHMP4A-206ENST00000533011 SMC5Q8IY18 1101 aa12.25□□□□□ -0.45
CHMP4A-206ENST00000533011 KBTBD3Q8NAB2 608 aa12.25□□□□□ -0.45
CHMP4A-206ENST00000533011 PI4K2BQ8TCG2 481 aa12.25□□□□□ -0.45
CHMP4A-206ENST00000533011 OTUD7AQ8TE49 926 aaPredicted RBP12.25□□□□□ -0.45
CHMP4A-206ENST00000533011 RNPC3Q96LT9 517 aaKnown RBP12.25□□□□□ -0.45
CHMP4A-206ENST00000533011 APBA2Q99767 749 aa12.25□□□□□ -0.45
CHMP4A-206ENST00000533011 TRIM34Q9BYJ4 488 aa12.25□□□□□ -0.45
CHMP4A-206ENST00000533011 AS3MTQ9HBK9 375 aa12.25□□□□□ -0.45
CHMP4A-206ENST00000533011 ATP11BQ9Y2G3 1177 aa12.25□□□□□ -0.45
CHMP4A-206ENST00000533011 TACC3Q9Y6A5 838 aa12.25□□□□□ -0.45
CHMP4A-206ENST00000533011 SIPA1L1O43166 1804 aa12.25□□□□□ -0.45
CHMP4A-206ENST00000533011 MYH1P12882 1939 aa12.25□□□□□ -0.45
CHMP4A-206ENST00000533011 DNAH12Q6ZR08 3092 aa12.24□□□□□ -0.45
CHMP4A-206ENST00000533011 IGHDP01880 384 aa12.24□□□□□ -0.45
CHMP4A-206ENST00000533011 DNAJB2P25686 324 aa12.24□□□□□ -0.45
CHMP4A-206ENST00000533011 CAP2P40123 477 aa12.24□□□□□ -0.45
CHMP4A-206ENST00000533011 SLFNL1Q499Z3 407 aa12.24□□□□□ -0.45
CHMP4A-206ENST00000533011 MORN1Q5T089 497 aa12.24□□□□□ -0.45
CHMP4A-206ENST00000533011 PLEKHH3Q7Z736 793 aa12.24□□□□□ -0.45
CHMP4A-206ENST00000533011 TTC6Q86TZ1 520 aa12.24□□□□□ -0.45
CHMP4A-206ENST00000533011 LCORLQ8N3X6 602 aa12.24□□□□□ -0.45
CHMP4A-206ENST00000533011 SALL3Q9BXA9 1300 aa12.24□□□□□ -0.45
CHMP4A-206ENST00000533011 ARMT1Q9H993 441 aa12.24□□□□□ -0.45
CHMP4A-206ENST00000533011 USP17L5A8MUK1 530 aa12.23□□□□□ -0.45
CHMP4A-206ENST00000533011 KBTBD13C9JR72 458 aa12.23□□□□□ -0.45
CHMP4A-206ENST00000533011 MBD4O95243 580 aa12.23□□□□□ -0.45
CHMP4A-206ENST00000533011 ZFYP08048 801 aaPredicted RBP12.23□□□□□ -0.45
CHMP4A-206ENST00000533011 HMGCS2P54868 508 aa12.23□□□□□ -0.45
CHMP4A-206ENST00000533011 SNX17Q15036 470 aa12.23□□□□□ -0.45
CHMP4A-206ENST00000533011 LRRFIP1Q32MZ4 808 aaKnown RBP12.23□□□□□ -0.45
CHMP4A-206ENST00000533011 B4GALNT3Q6L9W6 998 aa12.23□□□□□ -0.45
CHMP4A-206ENST00000533011 SDR42E1Q8WUS8 393 aa12.23□□□□□ -0.45
CHMP4A-206ENST00000533011 EHD4Q9H223 541 aa12.23□□□□□ -0.45
CHMP4A-206ENST00000533011 DNAJC18Q9H819 358 aa12.23□□□□□ -0.45
CHMP4A-206ENST00000533011 DCP1AQ9NPI6 582 aaPredicted RBP12.23□□□□□ -0.45
CHMP4A-206ENST00000533011 PRDM5Q9NQX1 630 aaPredicted RBP12.23□□□□□ -0.45
CHMP4A-206ENST00000533011 SERPINB13Q9UIV8 391 aa12.23□□□□□ -0.45
CHMP4A-206ENST00000533011 PTPRFP10586 1907 aa12.23□□□□□ -0.45
CHMP4A-206ENST00000533011 ATAD5Q96QE3 1844 aa12.23□□□□□ -0.45
CHMP4A-206ENST00000533011 C19orf81C9J6K1 198 aa12.22□□□□□ -0.45
CHMP4A-206ENST00000533011 RNF113AO15541 343 aaKnown RBP12.22□□□□□ -0.45
CHMP4A-206ENST00000533011 CHGBP05060 677 aa12.22□□□□□ -0.45
CHMP4A-206ENST00000533011 POLR3DP05423 398 aaPredicted RBP12.22□□□□□ -0.45
CHMP4A-206ENST00000533011 ASNSP08243 561 aa12.22□□□□□ -0.45
CHMP4A-206ENST00000533011 PDE1AP54750 535 aa12.22□□□□□ -0.45
CHMP4A-206ENST00000533011 IRX6P78412 446 aaPredicted RBP12.22□□□□□ -0.45
CHMP4A-206ENST00000533011 MAP2K5Q13163 448 aa12.22□□□□□ -0.45
CHMP4A-206ENST00000533011 RRP1BQ14684 758 aaKnown RBP12.22□□□□□ -0.45
CHMP4A-206ENST00000533011 GPR142Q7Z601 462 aa12.22□□□□□ -0.45
CHMP4A-206ENST00000533011 TIFAQ96CG3 184 aa12.22□□□□□ -0.45
CHMP4A-206ENST00000533011 SNX27Q96L92 541 aa12.22□□□□□ -0.45
CHMP4A-206ENST00000533011 LRFN3Q9BTN0 628 aa12.22□□□□□ -0.45
CHMP4A-206ENST00000533011 LNPKQ9C0E8 428 aa12.22□□□□□ -0.45
CHMP4A-206ENST00000533011 PUS7LQ9H0K6 701 aaKnown RBP12.22□□□□□ -0.45
CHMP4A-206ENST00000533011 CWC22Q9HCG8 908 aaKnown RBP12.22□□□□□ -0.45
CHMP4A-206ENST00000533011 ATP8A2Q9NTI2 1148 aa12.22□□□□□ -0.45
CHMP4A-206ENST00000533011 GINM1Q9NU53 330 aa12.22□□□□□ -0.45
CHMP4A-206ENST00000533011 MCM9Q9NXL9 1143 aa12.22□□□□□ -0.45
CHMP4A-206ENST00000533011 TMOD4Q9NZQ9 345 aa12.22□□□□□ -0.45
CHMP4A-206ENST00000533011 NAV1Q8NEY1 1877 aa12.22□□□□□ -0.45
CHMP4A-206ENST00000533011 PHIPQ8WWQ0 1821 aa12.22□□□□□ -0.45
CHMP4A-206ENST00000533011 CNGA1P29973 690 aa12.21□□□□□ -0.45
CHMP4A-206ENST00000533011 PLCD1P51178 756 aa12.21□□□□□ -0.45
CHMP4A-206ENST00000533011 HERVK_113P62684 666 aa12.21□□□□□ -0.45
CHMP4A-206ENST00000533011 ERVK-9P63128 1117 aa12.21□□□□□ -0.45
CHMP4A-206ENST00000533011 ERVK-24P63145 666 aa12.21□□□□□ -0.45
CHMP4A-206ENST00000533011 CCNA1P78396 465 aa12.21□□□□□ -0.45
CHMP4A-206ENST00000533011 ATP2B2Q01814 1243 aa12.21□□□□□ -0.45
CHMP4A-206ENST00000533011 NUCB1Q02818 461 aa12.21□□□□□ -0.45
CHMP4A-206ENST00000533011 CCL14Q16627 93 aa12.21□□□□□ -0.45
CHMP4A-206ENST00000533011 TMEM31Q5JXX7 168 aa12.21□□□□□ -0.45
CHMP4A-206ENST00000533011 TATDN1Q6P1N9 297 aa12.21□□□□□ -0.45
CHMP4A-206ENST00000533011 CCDC174Q6PII3 467 aa12.21□□□□□ -0.45
CHMP4A-206ENST00000533011 CHD1LQ86WJ1 897 aa12.21□□□□□ -0.45
CHMP4A-206ENST00000533011 APPBP2Q92624 585 aa12.21□□□□□ -0.45
CHMP4A-206ENST00000533011 DDRGK1Q96HY6 314 aa12.21□□□□□ -0.45
CHMP4A-206ENST00000533011 P2RX7Q99572 595 aaKnown RBP12.21□□□□□ -0.45
CHMP4A-206ENST00000533011 PDLIM7Q9NR12 457 aa12.21□□□□□ -0.45
CHMP4A-206ENST00000533011 CXXC1Q9P0U4 656 aaPredicted RBP12.21□□□□□ -0.45
CHMP4A-206ENST00000533011 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.21□□□□□ -0.45
CHMP4A-206ENST00000533011 SLC4A4Q9Y6R1 1079 aa12.21□□□□□ -0.45
CHMP4A-206ENST00000533011 PLXNB2O15031 1838 aa12.21□□□□□ -0.46
CHMP4A-206ENST00000533011 PRKAB2O43741 272 aa12.2□□□□□ -0.46
CHMP4A-206ENST00000533011 HOXC6P09630 235 aa12.2□□□□□ -0.46
CHMP4A-206ENST00000533011 CCDC84Q86UT8 332 aaPredicted RBP12.2□□□□□ -0.46
CHMP4A-206ENST00000533011 PPM1EQ8WY54 764 aa12.2□□□□□ -0.46
CHMP4A-206ENST00000533011 STRBPQ96SI9 672 aaKnown RBP12.2□□□□□ -0.46
CHMP4A-206ENST00000533011 FSD1Q9BTV5 496 aa12.2□□□□□ -0.46
CHMP4A-206ENST00000533011 WDR18Q9BV38 432 aa12.2□□□□□ -0.46
CHMP4A-206ENST00000533011 RBPJLQ9UBG7 517 aa12.2□□□□□ -0.46
CHMP4A-206ENST00000533011 LTBP2Q14767 1821 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms