RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 C6orf163Q5TEZ5 329 aa11.93□□□□□ -0.5
COLCA1-203ENST00000532918 CABP7Q86V35 215 aa11.93□□□□□ -0.5
COLCA1-203ENST00000532918 NAP1L3Q99457 506 aaPredicted RBP11.93□□□□□ -0.5
COLCA1-203ENST00000532918 FAM204AQ9H8W3 233 aa11.93□□□□□ -0.5
COLCA1-203ENST00000532918 MRPL44Q9H9J2 332 aaKnown RBP11.93□□□□□ -0.5
COLCA1-203ENST00000532918 DBNDD1Q9H9R9 158 aa11.93□□□□□ -0.5
COLCA1-203ENST00000532918 ATG3Q9NT62 314 aa11.93□□□□□ -0.5
COLCA1-203ENST00000532918 PNMA6EA0A0J9YXQ4 647 aa11.92□□□□□ -0.5
COLCA1-203ENST00000532918 HSF2BPO75031 334 aa11.92□□□□□ -0.5
COLCA1-203ENST00000532918 TUBB4BP68371 445 aa11.92□□□□□ -0.5
COLCA1-203ENST00000532918 FAM182BQ5T319 152 aa11.92□□□□□ -0.5
COLCA1-203ENST00000532918 BEND3Q5T5X7 828 aa11.92□□□□□ -0.5
COLCA1-203ENST00000532918 PNMA1Q8ND90 353 aa11.92□□□□□ -0.5
COLCA1-203ENST00000532918 CDHR1Q96JP9 859 aa11.92□□□□□ -0.5
COLCA1-203ENST00000532918 KANSL2Q9H9L4 492 aa11.92□□□□□ -0.5
COLCA1-203ENST00000532918 HEG1Q9ULI3 1381 aa11.92□□□□□ -0.5
COLCA1-203ENST00000532918 CTAGE15A4D2H0 777 aa11.92□□□□□ -0.5
COLCA1-203ENST00000532918 CTAGE8P0CG41 777 aa11.92□□□□□ -0.5
COLCA1-203ENST00000532918 BCRP11274 1271 aa11.92□□□□□ -0.5
COLCA1-203ENST00000532918 NT5C2P49902 561 aa11.92□□□□□ -0.5
COLCA1-203ENST00000532918 ASPRV1Q53RT3 343 aa11.92□□□□□ -0.5
COLCA1-203ENST00000532918 MAEAQ7L5Y9 396 aa11.92□□□□□ -0.5
COLCA1-203ENST00000532918 CTAGE6Q86UF2 777 aa11.92□□□□□ -0.5
COLCA1-203ENST00000532918 CTAGE4Q8IX94 777 aa11.92□□□□□ -0.5
COLCA1-203ENST00000532918 RNF169Q8NCN4 708 aa11.92□□□□□ -0.5
COLCA1-203ENST00000532918 SLC17A8Q8NDX2 589 aa11.92□□□□□ -0.5
COLCA1-203ENST00000532918 SSH3Q8TE77 659 aa11.92□□□□□ -0.5
COLCA1-203ENST00000532918 KCNH3Q9ULD8 1083 aa11.92□□□□□ -0.5
COLCA1-203ENST00000532918 LRFN2Q9ULH4 789 aa11.92□□□□□ -0.5
COLCA1-203ENST00000532918 MAP3K4Q9Y6R4 1608 aa11.92□□□□□ -0.5
COLCA1-203ENST00000532918 PTGS1P23219 599 aa11.92□□□□□ -0.5
COLCA1-203ENST00000532918 SKAP1Q86WV1 359 aa11.92□□□□□ -0.5
COLCA1-203ENST00000532918 CCDC114Q96M63 670 aa11.92□□□□□ -0.5
COLCA1-203ENST00000532918 ZNF830Q96NB3 372 aaPredicted RBP11.92□□□□□ -0.5
COLCA1-203ENST00000532918 AMNQ9BXJ7 453 aa11.92□□□□□ -0.5
COLCA1-203ENST00000532918 GCNT3O95395 438 aa11.92□□□□□ -0.5
COLCA1-203ENST00000532918 TNNC2P02585 160 aa11.92□□□□□ -0.5
COLCA1-203ENST00000532918 HAUS7Q99871 368 aa11.92□□□□□ -0.5
COLCA1-203ENST00000532918 TMX1Q9H3N1 280 aa11.92□□□□□ -0.5
COLCA1-203ENST00000532918 SPON1Q9HCB6 807 aa11.92□□□□□ -0.5
COLCA1-203ENST00000532918 COPRSQ9NQ92 184 aa11.92□□□□□ -0.5
COLCA1-203ENST00000532918 TNNQ9UQP3 1299 aa11.92□□□□□ -0.5
COLCA1-203ENST00000532918 CLASP1Q7Z460 1538 aa11.92□□□□□ -0.5
COLCA1-203ENST00000532918 TMED8Q6PL24 325 aaPredicted RBP11.92□□□□□ -0.5
COLCA1-203ENST00000532918 ODF2LQ9ULJ1 636 aa11.92□□□□□ -0.5
COLCA1-203ENST00000532918 ADGRL3Q9HAR2 1447 aa11.91□□□□□ -0.5
COLCA1-203ENST00000532918 E7EWF7 191 aa11.91□□□□□ -0.5
COLCA1-203ENST00000532918 RAD17O75943 681 aa11.91□□□□□ -0.5
COLCA1-203ENST00000532918 SYT1P21579 422 aa11.91□□□□□ -0.5
COLCA1-203ENST00000532918 SARNPP82979 210 aaKnown RBP11.91□□□□□ -0.5
COLCA1-203ENST00000532918 RETREG2Q8NC44 543 aa11.91□□□□□ -0.5
COLCA1-203ENST00000532918 GJD4Q96KN9 370 aaPredicted RBP11.91□□□□□ -0.5
COLCA1-203ENST00000532918 GNA14O95837 355 aa11.91□□□□□ -0.5
COLCA1-203ENST00000532918 HSPA4P34932 840 aa11.91□□□□□ -0.5
COLCA1-203ENST00000532918 LEO1Q8WVC0 666 aaPredicted RBP11.91□□□□□ -0.5
COLCA1-203ENST00000532918 NUP58Q9BVL2 599 aa11.91□□□□□ -0.5
COLCA1-203ENST00000532918 MIS12Q9H081 205 aa11.91□□□□□ -0.5
COLCA1-203ENST00000532918 DNAJC25Q9H1X3 360 aa11.91□□□□□ -0.5
COLCA1-203ENST00000532918 MTRF1LQ9UGC7 380 aaKnown RBP11.91□□□□□ -0.5
COLCA1-203ENST00000532918 GCC2Q8IWJ2 1684 aa11.91□□□□□ -0.5
COLCA1-203ENST00000532918 ARHGEF37A1IGU5 675 aa11.91□□□□□ -0.5
COLCA1-203ENST00000532918 IQCA1LA6NCM1 817 aa11.91□□□□□ -0.5
COLCA1-203ENST00000532918 KLRF2D3W0D1 207 aa11.91□□□□□ -0.5
COLCA1-203ENST00000532918 IVLP07476 585 aa11.91□□□□□ -0.5
COLCA1-203ENST00000532918 HOXD10P28358 340 aa11.91□□□□□ -0.5
COLCA1-203ENST00000532918 KRT9P35527 623 aa11.91□□□□□ -0.5
COLCA1-203ENST00000532918 MYL5Q02045 173 aa11.91□□□□□ -0.5
COLCA1-203ENST00000532918 TBC1D8BQ0IIM8 1120 aa11.91□□□□□ -0.5
COLCA1-203ENST00000532918 ZSCAN23Q3MJ62 389 aa11.91□□□□□ -0.5
COLCA1-203ENST00000532918 HSP90AA4PQ58FG1 418 aa11.91□□□□□ -0.5
COLCA1-203ENST00000532918 XKR9Q5GH70 373 aa11.91□□□□□ -0.5
COLCA1-203ENST00000532918 ODR4Q5SWX8 454 aa11.91□□□□□ -0.5
COLCA1-203ENST00000532918 FAM102BQ5T8I3 360 aa11.91□□□□□ -0.5
COLCA1-203ENST00000532918 KRT40Q6A162 431 aa11.91□□□□□ -0.5
COLCA1-203ENST00000532918 RPS6KC1Q96S38 1066 aa11.91□□□□□ -0.5
COLCA1-203ENST00000532918 SNX14Q9Y5W7 946 aa11.91□□□□□ -0.5
COLCA1-203ENST00000532918 CFAP65Q6ZU64 1925 aaKnown RBP11.91□□□□□ -0.5
COLCA1-203ENST00000532918 E7EVH7 732 aa11.91□□□□□ -0.5
COLCA1-203ENST00000532918 TTLL1O95922 423 aa11.91□□□□□ -0.5
COLCA1-203ENST00000532918 CD19P15391 556 aa11.91□□□□□ -0.5
COLCA1-203ENST00000532918 KIF11P52732 1056 aa11.91□□□□□ -0.5
COLCA1-203ENST00000532918 PPP2R5AQ15172 486 aa11.91□□□□□ -0.5
COLCA1-203ENST00000532918 INF2Q27J81 1249 aa11.91□□□□□ -0.5
COLCA1-203ENST00000532918 UTP14CQ5TAP6 766 aaKnown RBP11.91□□□□□ -0.5
COLCA1-203ENST00000532918 PLA2G4DQ86XP0 818 aa11.91□□□□□ -0.5
COLCA1-203ENST00000532918 LRRC47Q8N1G4 583 aaKnown RBP11.91□□□□□ -0.5
COLCA1-203ENST00000532918 PROCA1Q8NCQ7 364 aaPredicted RBP11.91□□□□□ -0.5
COLCA1-203ENST00000532918 PIGBQ92521 554 aa11.91□□□□□ -0.5
COLCA1-203ENST00000532918 CTNND2Q9UQB3 1225 aa11.91□□□□□ -0.5
COLCA1-203ENST00000532918 PAXBP1Q9Y5B6 917 aa11.91□□□□□ -0.5
COLCA1-203ENST00000532918 DYNC1I1O14576 645 aa11.9□□□□□ -0.5
COLCA1-203ENST00000532918 LIG4P49917 911 aa11.9□□□□□ -0.5
COLCA1-203ENST00000532918 BLIDQ8IZY5 108 aa11.9□□□□□ -0.5
COLCA1-203ENST00000532918 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.9□□□□□ -0.5
COLCA1-203ENST00000532918 TNNI1P19237 187 aa11.9□□□□□ -0.5
COLCA1-203ENST00000532918 ASIC2Q16515 512 aa11.9□□□□□ -0.5
COLCA1-203ENST00000532918 CSGALNACT2Q8N6G5 542 aa11.9□□□□□ -0.5
COLCA1-203ENST00000532918 PI4KBQ9UBF8 816 aa11.9□□□□□ -0.5
COLCA1-203ENST00000532918 SHROOM2Q13796 1616 aa11.9□□□□□ -0.5
COLCA1-203ENST00000532918 CTAGE9A4FU28 777 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms