RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 CCDC114Q96M63 670 aa16.44■□□□□ 0.22
PCDHA9-202ENST00000532602 HAUS2Q9NVX0 235 aa16.44■□□□□ 0.22
PCDHA9-202ENST00000532602 ADCY10Q96PN6 1610 aa16.44■□□□□ 0.22
PCDHA9-202ENST00000532602 ANKARQ7Z5J8 1434 aa16.44■□□□□ 0.22
PCDHA9-202ENST00000532602 XRCC6P12956 609 aaKnown RBP eCLIP16.44■□□□□ 0.22
PCDHA9-202ENST00000532602 ERCC5P28715 1186 aaPredicted RBP16.44■□□□□ 0.22
PCDHA9-202ENST00000532602 ZBTB16Q05516 673 aa16.44■□□□□ 0.22
PCDHA9-202ENST00000532602 GPR161Q8N6U8 529 aaKnown RBP16.44■□□□□ 0.22
PCDHA9-202ENST00000532602 PPP1R9BQ96SB3 815 aa16.44■□□□□ 0.22
PCDHA9-202ENST00000532602 NT5C3AQ9H0P0 336 aa16.44■□□□□ 0.22
PCDHA9-202ENST00000532602 ANTXR1Q9H6X2 564 aa16.44■□□□□ 0.22
PCDHA9-202ENST00000532602 KIF24Q5T7B8 1368 aa16.44■□□□□ 0.22
PCDHA9-202ENST00000532602 MRPL44Q9H9J2 332 aaKnown RBP16.44■□□□□ 0.22
PCDHA9-202ENST00000532602 ATP8A2Q9NTI2 1148 aa16.44■□□□□ 0.22
PCDHA9-202ENST00000532602 ODF2LQ9ULJ1 636 aa16.44■□□□□ 0.22
PCDHA9-202ENST00000532602 RFX1P22670 979 aa16.44■□□□□ 0.22
PCDHA9-202ENST00000532602 SULF1Q8IWU6 871 aa16.44■□□□□ 0.22
PCDHA9-202ENST00000532602 METTL13Q8N6R0 699 aa16.44■□□□□ 0.22
PCDHA9-202ENST00000532602 STK10O94804 968 aaKnown RBP16.43■□□□□ 0.22
PCDHA9-202ENST00000532602 CCDC122Q5T0U0 273 aa16.43■□□□□ 0.22
PCDHA9-202ENST00000532602 OTUD6AQ7L8S5 288 aa16.43■□□□□ 0.22
PCDHA9-202ENST00000532602 CCDC26Q8TAB7 109 aa16.43■□□□□ 0.22
PCDHA9-202ENST00000532602 WDR70Q9NW82 654 aa16.43■□□□□ 0.22
PCDHA9-202ENST00000532602 TECP42680 631 aa16.43■□□□□ 0.22
PCDHA9-202ENST00000532602 TNKSO95271 1327 aa16.43■□□□□ 0.22
PCDHA9-202ENST00000532602 PRR16Q569H4 304 aa16.43■□□□□ 0.22
PCDHA9-202ENST00000532602 MLKLQ8NB16 471 aa16.43■□□□□ 0.22
PCDHA9-202ENST00000532602 DBNLQ9UJU6 430 aaKnown RBP16.43■□□□□ 0.22
PCDHA9-202ENST00000532602 DYNC1I1O14576 645 aa16.43■□□□□ 0.22
PCDHA9-202ENST00000532602 ZNF202O95125 648 aa16.43■□□□□ 0.22
PCDHA9-202ENST00000532602 MAP7D1Q3KQU3 841 aa16.43■□□□□ 0.22
PCDHA9-202ENST00000532602 RDH13Q8NBN7 331 aa16.43■□□□□ 0.22
PCDHA9-202ENST00000532602 NUP58Q9BVL2 599 aa16.43■□□□□ 0.22
PCDHA9-202ENST00000532602 NACA2Q9H009 215 aa16.43■□□□□ 0.22
PCDHA9-202ENST00000532602 SYNRGQ9UMZ2 1314 aa16.43■□□□□ 0.22
PCDHA9-202ENST00000532602 KRT19P08727 400 aa16.43■□□□□ 0.22
PCDHA9-202ENST00000532602 ICA1Q05084 483 aa16.43■□□□□ 0.22
PCDHA9-202ENST00000532602 DAPK3O43293 454 aa16.42■□□□□ 0.22
PCDHA9-202ENST00000532602 EXOC3O60645 756 aa16.42■□□□□ 0.22
PCDHA9-202ENST00000532602 GDF11O95390 407 aa16.42■□□□□ 0.22
PCDHA9-202ENST00000532602 ADD1P35611 737 aaKnown RBP16.42■□□□□ 0.22
PCDHA9-202ENST00000532602 NLRP10Q86W26 655 aa16.42■□□□□ 0.22
PCDHA9-202ENST00000532602 PNMA1Q8ND90 353 aa16.42■□□□□ 0.22
PCDHA9-202ENST00000532602 GLG1Q92896 1179 aa16.42■□□□□ 0.22
PCDHA9-202ENST00000532602 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.42■□□□□ 0.22
PCDHA9-202ENST00000532602 PALLDQ8WX93 1383 aa16.42■□□□□ 0.22
PCDHA9-202ENST00000532602 HEG1Q9ULI3 1381 aa16.42■□□□□ 0.22
PCDHA9-202ENST00000532602 PNOCQ13519 176 aa16.42■□□□□ 0.22
PCDHA9-202ENST00000532602 SUSD4Q5VX71 490 aa16.42■□□□□ 0.22
PCDHA9-202ENST00000532602 CEP152O94986 1710 aa16.42■□□□□ 0.22
PCDHA9-202ENST00000532602 CLASP1Q7Z460 1538 aa16.42■□□□□ 0.22
PCDHA9-202ENST00000532602 AFF2P51816 1311 aa16.42■□□□□ 0.22
PCDHA9-202ENST00000532602 E7EVH7 732 aa16.42■□□□□ 0.22
PCDHA9-202ENST00000532602 FAM47CQ5HY64 1035 aa16.42■□□□□ 0.22
PCDHA9-202ENST00000532602 AXIN2Q9Y2T1 843 aa16.42■□□□□ 0.22
PCDHA9-202ENST00000532602 UBXN2AP68543 259 aa16.42■□□□□ 0.22
PCDHA9-202ENST00000532602 ARHGEF6Q15052 776 aa16.42■□□□□ 0.22
PCDHA9-202ENST00000532602 CCDC125Q86Z20 511 aa16.42■□□□□ 0.22
PCDHA9-202ENST00000532602 ANKS4BQ8N8V4 417 aa16.42■□□□□ 0.22
PCDHA9-202ENST00000532602 PSTPIP2Q9H939 334 aa16.42■□□□□ 0.22
PCDHA9-202ENST00000532602 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.42■□□□□ 0.22
PCDHA9-202ENST00000532602 GTF2F1P35269 517 aaKnown RBP eCLIP16.42■□□□□ 0.22
PCDHA9-202ENST00000532602 PAK1Q13153 545 aa16.42■□□□□ 0.22
PCDHA9-202ENST00000532602 HLFQ16534 295 aa16.42■□□□□ 0.22
PCDHA9-202ENST00000532602 THRAP3Q9Y2W1 955 aaKnown RBP16.42■□□□□ 0.22
PCDHA9-202ENST00000532602 P4HA1P13674 534 aa16.41■□□□□ 0.22
PCDHA9-202ENST00000532602 YWHAEP62258 255 aaKnown RBP16.41■□□□□ 0.22
PCDHA9-202ENST00000532602 FAM102BQ5T8I3 360 aa16.41■□□□□ 0.22
PCDHA9-202ENST00000532602 TPCN1Q9ULQ1 816 aa16.41■□□□□ 0.22
PCDHA9-202ENST00000532602 TMEM232C9JQI7 657 aa16.41■□□□□ 0.22
PCDHA9-202ENST00000532602 FLOT1O75955 427 aa16.41■□□□□ 0.22
PCDHA9-202ENST00000532602 ABCB5Q2M3G0 1257 aa16.41■□□□□ 0.22
PCDHA9-202ENST00000532602 LONRF3Q496Y0 759 aa16.41■□□□□ 0.22
PCDHA9-202ENST00000532602 KCTD1Q719H9 257 aa16.41■□□□□ 0.22
PCDHA9-202ENST00000532602 SMIM23A6NLE4 172 aa16.41■□□□□ 0.22
PCDHA9-202ENST00000532602 CCDC6Q16204 474 aa16.41■□□□□ 0.22
PCDHA9-202ENST00000532602 BAG1Q99933 345 aaPredicted RBP16.41■□□□□ 0.22
PCDHA9-202ENST00000532602 GAS7O60861 476 aa16.41■□□□□ 0.22
PCDHA9-202ENST00000532602 MCM6Q14566 821 aa16.41■□□□□ 0.22
PCDHA9-202ENST00000532602 ASIC2Q16515 512 aa16.41■□□□□ 0.22
PCDHA9-202ENST00000532602 TMC4Q7Z404 712 aa16.41■□□□□ 0.22
PCDHA9-202ENST00000532602 MLXIPQ9HAP2 919 aa16.41■□□□□ 0.22
PCDHA9-202ENST00000532602 PRKAB2O43741 272 aa16.41■□□□□ 0.22
PCDHA9-202ENST00000532602 RNASE9P60153 205 aaKnown RBP16.41■□□□□ 0.22
PCDHA9-202ENST00000532602 ATRIPQ8WXE1 791 aa16.41■□□□□ 0.22
PCDHA9-202ENST00000532602 CSRNP1Q96S65 589 aa16.41■□□□□ 0.22
PCDHA9-202ENST00000532602 DDX23Q9BUQ8 820 aaKnown RBP16.41■□□□□ 0.22
PCDHA9-202ENST00000532602 KLRF2D3W0D1 207 aa16.4■□□□□ 0.22
PCDHA9-202ENST00000532602 SPATA24Q86W54 205 aa16.4■□□□□ 0.22
PCDHA9-202ENST00000532602 TRMT44Q8IYL2 757 aaKnown RBP16.4■□□□□ 0.22
PCDHA9-202ENST00000532602 IGSF22Q8N9C0 903 aa16.4■□□□□ 0.22
PCDHA9-202ENST00000532602 GTF3C6Q969F1 213 aa16.4■□□□□ 0.22
PCDHA9-202ENST00000532602 MRPL11Q9Y3B7 192 aaKnown RBP16.4■□□□□ 0.22
PCDHA9-202ENST00000532602 SPATA31A3Q5VYP0 1347 aa16.4■□□□□ 0.22
PCDHA9-202ENST00000532602 ZBTB24O43167 697 aaPredicted RBP16.4■□□□□ 0.22
PCDHA9-202ENST00000532602 MIER3Q7Z3K6 550 aa16.4■□□□□ 0.22
PCDHA9-202ENST00000532602 UBL4BQ8N7F7 174 aa16.4■□□□□ 0.22
PCDHA9-202ENST00000532602 KDM3AQ9Y4C1 1321 aa16.4■□□□□ 0.22
PCDHA9-202ENST00000532602 MIGA2Q7L4E1 593 aa16.4■□□□□ 0.22
PCDHA9-202ENST00000532602 CCDC25Q86WR0 208 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms