RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 MMS19Q96T76 1030 aa9.12□□□□□ -0.95
CSDE1-214ENST00000530886 OSBPL7Q9BZF2 842 aa9.12□□□□□ -0.95
CSDE1-214ENST00000530886 RGL1Q9NZL6 768 aa9.12□□□□□ -0.95
CSDE1-214ENST00000530886 SEMA3EO15041 775 aa9.11□□□□□ -0.95
CSDE1-214ENST00000530886 PPP6R2O75170 966 aa9.11□□□□□ -0.95
CSDE1-214ENST00000530886 CDKL5O76039 1030 aa9.11□□□□□ -0.95
CSDE1-214ENST00000530886 CYP21A2P08686 494 aa9.11□□□□□ -0.95
CSDE1-214ENST00000530886 MDH1P40925 334 aaKnown RBP9.11□□□□□ -0.95
CSDE1-214ENST00000530886 SCTRP47872 440 aa9.11□□□□□ -0.95
CSDE1-214ENST00000530886 ELF3P78545 371 aaPredicted RBP9.11□□□□□ -0.95
CSDE1-214ENST00000530886 MREGQ8N565 214 aa9.11□□□□□ -0.95
CSDE1-214ENST00000530886 TRIML1Q8N9V2 468 aa9.11□□□□□ -0.95
CSDE1-214ENST00000530886 MLKLQ8NB16 471 aa9.11□□□□□ -0.95
CSDE1-214ENST00000530886 L3MBTL3Q96JM7 780 aaPredicted RBP9.11□□□□□ -0.95
CSDE1-214ENST00000530886 SCLT1Q96NL6 688 aa9.11□□□□□ -0.95
CSDE1-214ENST00000530886 NUP58Q9BVL2 599 aa9.11□□□□□ -0.95
CSDE1-214ENST00000530886 CENPHQ9H3R5 247 aa9.11□□□□□ -0.95
CSDE1-214ENST00000530886 HAUS2Q9NVX0 235 aa9.11□□□□□ -0.95
CSDE1-214ENST00000530886 TLR7Q9NYK1 1049 aaKnown RBP9.11□□□□□ -0.95
CSDE1-214ENST00000530886 WWC3Q9ULE0 1092 aa9.11□□□□□ -0.95
CSDE1-214ENST00000530886 SAR1BQ9Y6B6 198 aa9.11□□□□□ -0.95
CSDE1-214ENST00000530886 ANO9A1A5B4 782 aa9.11□□□□□ -0.95
CSDE1-214ENST00000530886 LUC7L3O95232 432 aaKnown RBP9.11□□□□□ -0.95
CSDE1-214ENST00000530886 PAPOLAP51003 745 aaKnown RBP9.11□□□□□ -0.95
CSDE1-214ENST00000530886 IFT88Q13099 833 aa9.11□□□□□ -0.95
CSDE1-214ENST00000530886 KIAA0753Q2KHM9 967 aa9.11□□□□□ -0.95
CSDE1-214ENST00000530886 ACCSLQ4AC99 568 aa9.11□□□□□ -0.95
CSDE1-214ENST00000530886 SPATA21Q7Z572 469 aa9.11□□□□□ -0.95
CSDE1-214ENST00000530886 ATL2Q8NHH9 583 aa9.11□□□□□ -0.95
CSDE1-214ENST00000530886 EZH1Q92800 747 aaPredicted RBP9.11□□□□□ -0.95
CSDE1-214ENST00000530886 ARL8AQ96BM9 186 aa9.11□□□□□ -0.95
CSDE1-214ENST00000530886 EAF2Q96CJ1 260 aaPredicted RBP9.11□□□□□ -0.95
CSDE1-214ENST00000530886 CYFIP2Q96F07 1278 aa9.11□□□□□ -0.95
CSDE1-214ENST00000530886 RNPC3Q96LT9 517 aaKnown RBP9.11□□□□□ -0.95
CSDE1-214ENST00000530886 ANAPC4Q9UJX5 808 aa9.11□□□□□ -0.95
CSDE1-214ENST00000530886 PCDHGA4Q9Y5G9 962 aa9.11□□□□□ -0.95
CSDE1-214ENST00000530886 CLIC4Q9Y696 253 aa9.11□□□□□ -0.95
CSDE1-214ENST00000530886 TJP1Q07157 1748 aa9.11□□□□□ -0.95
CSDE1-214ENST00000530886 ZMYM6O95789 1325 aa9.11□□□□□ -0.95
CSDE1-214ENST00000530886 ARFGEF2Q9Y6D5 1785 aa9.11□□□□□ -0.95
CSDE1-214ENST00000530886 PPP1R12BO60237 982 aaPredicted RBP9.11□□□□□ -0.95
CSDE1-214ENST00000530886 HSF2BPO75031 334 aa9.11□□□□□ -0.95
CSDE1-214ENST00000530886 ABL1P00519 1130 aa9.11□□□□□ -0.95
CSDE1-214ENST00000530886 GSTA1P08263 222 aa9.11□□□□□ -0.95
CSDE1-214ENST00000530886 HDLBPQ00341 1268 aaKnown RBP9.11□□□□□ -0.95
CSDE1-214ENST00000530886 RBL2Q08999 1139 aa9.11□□□□□ -0.95
CSDE1-214ENST00000530886 TEX9Q8N6V9 391 aa9.11□□□□□ -0.95
CSDE1-214ENST00000530886 SUDS3Q9H7L9 328 aaPredicted RBP9.11□□□□□ -0.95
CSDE1-214ENST00000530886 CHD4Q14839 1912 aa9.11□□□□□ -0.95
CSDE1-214ENST00000530886 SPDYE3A6NKU9 549 aa9.1□□□□□ -0.95
CSDE1-214ENST00000530886 LINGO3P0C6S8 592 aa9.1□□□□□ -0.95
CSDE1-214ENST00000530886 ERCC5P28715 1186 aaPredicted RBP9.1□□□□□ -0.95
CSDE1-214ENST00000530886 SYKP43405 635 aa9.1□□□□□ -0.95
CSDE1-214ENST00000530886 PDE4BQ07343 736 aa9.1□□□□□ -0.95
CSDE1-214ENST00000530886 SNX1Q13596 522 aa9.1□□□□□ -0.95
CSDE1-214ENST00000530886 SLC39A14Q15043 492 aa9.1□□□□□ -0.95
CSDE1-214ENST00000530886 E2F5Q15329 346 aa9.1□□□□□ -0.95
CSDE1-214ENST00000530886 SF3A1Q15459 793 aaKnown RBP9.1□□□□□ -0.95
CSDE1-214ENST00000530886 PTPN21Q16825 1174 aa9.1□□□□□ -0.95
CSDE1-214ENST00000530886 CCDC70Q6NSX1 233 aa9.1□□□□□ -0.95
CSDE1-214ENST00000530886 PPFIBP1Q86W92 1011 aa9.1□□□□□ -0.95
CSDE1-214ENST00000530886 GALNT15Q8N3T1 639 aa9.1□□□□□ -0.95
CSDE1-214ENST00000530886 NBPF15Q8N660 670 aa9.1□□□□□ -0.95
CSDE1-214ENST00000530886 EHBP1Q8NDI1 1231 aa9.1□□□□□ -0.95
CSDE1-214ENST00000530886 IL17REQ8NFR9 667 aa9.1□□□□□ -0.95
CSDE1-214ENST00000530886 COG3Q96JB2 828 aa9.1□□□□□ -0.95
CSDE1-214ENST00000530886 LMCD1Q9NZU5 365 aa9.1□□□□□ -0.95
CSDE1-214ENST00000530886 METP08581 1390 aa9.1□□□□□ -0.95
CSDE1-214ENST00000530886 GLI3P10071 1580 aa9.1□□□□□ -0.95
CSDE1-214ENST00000530886 PAEPP09466 180 aa9.1□□□□□ -0.95
CSDE1-214ENST00000530886 LMNB2Q03252 620 aa9.1□□□□□ -0.95
CSDE1-214ENST00000530886 LAMB3Q13751 1172 aa9.1□□□□□ -0.95
CSDE1-214ENST00000530886 CMPK2Q5EBM0 449 aa9.1□□□□□ -0.95
CSDE1-214ENST00000530886 SPECC1Q5M775 1068 aa9.1□□□□□ -0.95
CSDE1-214ENST00000530886 MYSM1Q5VVJ2 828 aa9.1□□□□□ -0.95
CSDE1-214ENST00000530886 METTL16Q86W50 562 aaKnown RBP9.1□□□□□ -0.95
CSDE1-214ENST00000530886 ANKRD24Q8TF21 1146 aa9.1□□□□□ -0.95
CSDE1-214ENST00000530886 DTNBP1Q96EV8 351 aa9.1□□□□□ -0.95
CSDE1-214ENST00000530886 ZNF274Q96GC6 653 aaPredicted RBP9.1□□□□□ -0.95
CSDE1-214ENST00000530886 SIL1Q9H173 461 aa9.1□□□□□ -0.95
CSDE1-214ENST00000530886 HAUS4Q9H6D7 363 aa9.1□□□□□ -0.95
CSDE1-214ENST00000530886 SLC5A4Q9NY91 659 aa9.1□□□□□ -0.95
CSDE1-214ENST00000530886 TMEM94Q12767 1356 aa9.1□□□□□ -0.95
CSDE1-214ENST00000530886 ALS2Q96Q42 1657 aa9.1□□□□□ -0.95
CSDE1-214ENST00000530886 HMGB1P1B2RPK0 211 aaPredicted RBP9.1□□□□□ -0.95
CSDE1-214ENST00000530886 PPIP5K2O43314 1243 aa9.1□□□□□ -0.95
CSDE1-214ENST00000530886 BUB1BO60566 1050 aaPredicted RBP9.1□□□□□ -0.95
CSDE1-214ENST00000530886 CHGBP05060 677 aa9.1□□□□□ -0.95
CSDE1-214ENST00000530886 RPSAP08865 295 aaKnown RBP9.1□□□□□ -0.95
CSDE1-214ENST00000530886 CD151P48509 253 aa9.1□□□□□ -0.95
CSDE1-214ENST00000530886 SARSP49591 514 aaKnown RBP9.1□□□□□ -0.95
CSDE1-214ENST00000530886 CCT2P78371 535 aaKnown RBP9.1□□□□□ -0.95
CSDE1-214ENST00000530886 RESP18Q5W5W9 173 aa9.1□□□□□ -0.95
CSDE1-214ENST00000530886 ANO1Q5XXA6 986 aa9.1□□□□□ -0.95
CSDE1-214ENST00000530886 CYP26C1Q6V0L0 522 aa9.1□□□□□ -0.95
CSDE1-214ENST00000530886 KIRREL3Q8IZU9 778 aa9.1□□□□□ -0.95
CSDE1-214ENST00000530886 IQCKQ8N0W5 287 aa9.1□□□□□ -0.95
CSDE1-214ENST00000530886 CLASRPQ8N2M8 674 aaKnown RBP9.1□□□□□ -0.95
CSDE1-214ENST00000530886 NFE2L3Q9Y4A8 694 aa9.1□□□□□ -0.95
CSDE1-214ENST00000530886 LMTK3Q96Q04 1460 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms