RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 ABRAQ8N0Z2 381 aa12.72□□□□□ -0.37
COPB1-207ENST00000529866 ACER1Q8TDN7 264 aa12.72□□□□□ -0.37
COPB1-207ENST00000529866 TANGO6Q9C0B7 1094 aa12.72□□□□□ -0.37
COPB1-207ENST00000529866 GPR108Q9NPR9 543 aa12.72□□□□□ -0.37
COPB1-207ENST00000529866 NRBP1Q9UHY1 535 aa12.72□□□□□ -0.37
COPB1-207ENST00000529866 LTBP2Q14767 1821 aa12.72□□□□□ -0.37
COPB1-207ENST00000529866 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.71□□□□□ -0.37
COPB1-207ENST00000529866 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.71□□□□□ -0.37
COPB1-207ENST00000529866 CYP2E1P05181 493 aaPredicted RBP12.71□□□□□ -0.37
COPB1-207ENST00000529866 DYNLL1P63167 89 aaKnown RBP12.71□□□□□ -0.37
COPB1-207ENST00000529866 FPGSQ05932 587 aa12.71□□□□□ -0.37
COPB1-207ENST00000529866 OS9Q13438 667 aaPredicted RBP12.71□□□□□ -0.37
COPB1-207ENST00000529866 RNF180Q86T96 592 aa12.71□□□□□ -0.37
COPB1-207ENST00000529866 GAS2L1Q99501 681 aaPredicted RBP12.71□□□□□ -0.37
COPB1-207ENST00000529866 MROH8Q9H579 483 aa12.71□□□□□ -0.37
COPB1-207ENST00000529866 XPNPEP3Q9NQH7 507 aa12.71□□□□□ -0.37
COPB1-207ENST00000529866 PHF24Q9UPV7 400 aa12.71□□□□□ -0.37
COPB1-207ENST00000529866 SIPA1L1O43166 1804 aa12.71□□□□□ -0.38
COPB1-207ENST00000529866 KIAA0355O15063 1070 aa12.7□□□□□ -0.38
COPB1-207ENST00000529866 PQBP1O60828 265 aaKnown RBP12.7□□□□□ -0.38
COPB1-207ENST00000529866 IDH1O75874 414 aaKnown RBP12.7□□□□□ -0.38
COPB1-207ENST00000529866 GRIN2CQ14957 1233 aa12.7□□□□□ -0.38
COPB1-207ENST00000529866 TNNI3KQ59H18 835 aa12.7□□□□□ -0.38
COPB1-207ENST00000529866 CCDC174Q6PII3 467 aa12.7□□□□□ -0.38
COPB1-207ENST00000529866 TMED8Q6PL24 325 aaPredicted RBP12.7□□□□□ -0.38
COPB1-207ENST00000529866 NCAPG2Q86XI2 1143 aa12.7□□□□□ -0.38
COPB1-207ENST00000529866 MIGA1Q8NAN2 632 aa12.7□□□□□ -0.38
COPB1-207ENST00000529866 USP38Q8NB14 1042 aa12.7□□□□□ -0.38
COPB1-207ENST00000529866 ARHGAP45Q92619 1136 aa12.7□□□□□ -0.38
COPB1-207ENST00000529866 TIFAQ96CG3 184 aa12.7□□□□□ -0.38
COPB1-207ENST00000529866 ZNF512BQ96KM6 892 aaPredicted RBP12.7□□□□□ -0.38
COPB1-207ENST00000529866 DBNDD2Q9BQY9 259 aa12.7□□□□□ -0.38
COPB1-207ENST00000529866 ZNF576Q9H609 170 aa12.7□□□□□ -0.38
COPB1-207ENST00000529866 TMEM39AQ9NV64 488 aa12.7□□□□□ -0.38
COPB1-207ENST00000529866 FPGT-TNNI3KV9GXZ4 949 aa12.7□□□□□ -0.38
COPB1-207ENST00000529866 FRMPD3Q5JV73 1810 aa12.69□□□□□ -0.38
COPB1-207ENST00000529866 COBLO75128 1261 aa12.69□□□□□ -0.38
COPB1-207ENST00000529866 FCER1AP12319 257 aa12.69□□□□□ -0.38
COPB1-207ENST00000529866 ZAP70P43403 619 aa12.69□□□□□ -0.38
COPB1-207ENST00000529866 PLS1Q14651 629 aa12.69□□□□□ -0.38
COPB1-207ENST00000529866 IL27Q8NEV9 243 aa12.69□□□□□ -0.38
COPB1-207ENST00000529866 ATXN2LQ8WWM7 1075 aaKnown RBP12.69□□□□□ -0.38
COPB1-207ENST00000529866 MAML3Q96JK9 1138 aa12.69□□□□□ -0.38
COPB1-207ENST00000529866 PIH1D3Q9NQM4 214 aaKnown RBP12.69□□□□□ -0.38
COPB1-207ENST00000529866 TNNQ9UQP3 1299 aa12.69□□□□□ -0.38
COPB1-207ENST00000529866 ROBO3Q96MS0 1386 aa12.69□□□□□ -0.38
COPB1-207ENST00000529866 PNMA6EA0A0J9YXQ4 647 aa12.68□□□□□ -0.38
COPB1-207ENST00000529866 A0A1W2PQ45 241 aaPredicted RBP12.68□□□□□ -0.38
COPB1-207ENST00000529866 A0A1W2PQY0 241 aa12.68□□□□□ -0.38
COPB1-207ENST00000529866 DCDC2CA8MYV0 355 aa12.68□□□□□ -0.38
COPB1-207ENST00000529866 CCER2I3L3R5 266 aa12.68□□□□□ -0.38
COPB1-207ENST00000529866 MPHOSPH10O00566 681 aaKnown RBP12.68□□□□□ -0.38
COPB1-207ENST00000529866 POLR3DP05423 398 aaPredicted RBP12.68□□□□□ -0.38
COPB1-207ENST00000529866 ITGB8P26012 769 aa12.68□□□□□ -0.38
COPB1-207ENST00000529866 SHMT1P34896 483 aa12.68□□□□□ -0.38
COPB1-207ENST00000529866 EPHB4P54760 987 aa12.68□□□□□ -0.38
COPB1-207ENST00000529866 SEPT2Q15019 361 aa12.68□□□□□ -0.38
COPB1-207ENST00000529866 PRAMEF19Q5SWL8 479 aa12.68□□□□□ -0.38
COPB1-207ENST00000529866 TOX2Q96NM4 488 aa12.68□□□□□ -0.38
COPB1-207ENST00000529866 SH2D4AQ9H788 454 aa12.68□□□□□ -0.38
COPB1-207ENST00000529866 THEGQ9P2T0 379 aa12.68□□□□□ -0.38
COPB1-207ENST00000529866 ZNF236Q9UL36 1845 aa12.67□□□□□ -0.38
COPB1-207ENST00000529866 IPO8O15397 1037 aaKnown RBP12.67□□□□□ -0.38
COPB1-207ENST00000529866 FLOT1O75955 427 aa12.67□□□□□ -0.38
COPB1-207ENST00000529866 SLC25A27O95847 323 aa12.67□□□□□ -0.38
COPB1-207ENST00000529866 AKR1A1P14550 325 aa12.67□□□□□ -0.38
COPB1-207ENST00000529866 MAP3K12Q12852 859 aa12.67□□□□□ -0.38
COPB1-207ENST00000529866 AKNAD1Q5T1N1 836 aa12.67□□□□□ -0.38
COPB1-207ENST00000529866 ANKRD33Q7Z3H0 272 aa12.67□□□□□ -0.38
COPB1-207ENST00000529866 MAGEB6Q8N7X4 407 aa12.67□□□□□ -0.38
COPB1-207ENST00000529866 NUP133Q8WUM0 1156 aa12.67□□□□□ -0.38
COPB1-207ENST00000529866 STARD7Q9NQZ5 370 aa12.67□□□□□ -0.38
COPB1-207ENST00000529866 BDP1A6H8Y1 2624 aa12.66□□□□□ -0.38
COPB1-207ENST00000529866 PGK1P00558 417 aa12.66□□□□□ -0.38
COPB1-207ENST00000529866 DSG3P32926 999 aa12.66□□□□□ -0.38
COPB1-207ENST00000529866 GUCY1A2P33402 732 aa12.66□□□□□ -0.38
COPB1-207ENST00000529866 PLA2G5P39877 138 aa12.66□□□□□ -0.38
COPB1-207ENST00000529866 PLCD1P51178 756 aa12.66□□□□□ -0.38
COPB1-207ENST00000529866 RARSP54136 660 aaKnown RBP12.66□□□□□ -0.38
COPB1-207ENST00000529866 PPIGQ13427 754 aaKnown RBP eCLIP12.66□□□□□ -0.383e-7■□□□□ 8.2
COPB1-207ENST00000529866 CCDC129Q6ZRS4 1044 aa12.66□□□□□ -0.38
COPB1-207ENST00000529866 TMEM179Q6ZVK1 233 aa12.66□□□□□ -0.38
COPB1-207ENST00000529866 SLC44A5Q8NCS7 719 aa12.66□□□□□ -0.38
COPB1-207ENST00000529866 PPM1EQ8WY54 764 aa12.66□□□□□ -0.38
COPB1-207ENST00000529866 FAM122AQ96E09 287 aa12.66□□□□□ -0.38
COPB1-207ENST00000529866 ASB2Q96Q27 587 aa12.66□□□□□ -0.38
COPB1-207ENST00000529866 UHRF1Q96T88 793 aaPredicted RBP12.66□□□□□ -0.38
COPB1-207ENST00000529866 MMP19Q99542 508 aa12.66□□□□□ -0.38
COPB1-207ENST00000529866 TSEN34Q9BSV6 310 aaKnown RBP12.66□□□□□ -0.38
COPB1-207ENST00000529866 CNPY2Q9Y2B0 182 aa12.66□□□□□ -0.38
COPB1-207ENST00000529866 RLFQ13129 1914 aa12.66□□□□□ -0.38
COPB1-207ENST00000529866 MROH7Q68CQ1 1323 aa12.65□□□□□ -0.38
COPB1-207ENST00000529866 A0A1W2PRG0 241 aa12.65□□□□□ -0.38
COPB1-207ENST00000529866 MOXD2PA6NHM9 499 aa12.65□□□□□ -0.38
COPB1-207ENST00000529866 TIMP1P01033 207 aa12.65□□□□□ -0.38
COPB1-207ENST00000529866 COPB2P35606 906 aa12.65□□□□□ -0.38
COPB1-207ENST00000529866 MRPS5P82675 430 aaKnown RBP12.65□□□□□ -0.38
COPB1-207ENST00000529866 GABPAQ06546 454 aa12.65□□□□□ -0.38
COPB1-207ENST00000529866 KCTD2Q14681 263 aa12.65□□□□□ -0.38
COPB1-207ENST00000529866 ADAMTS19Q8TE59 1207 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms