RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 RBPJLQ9UBG7 517 aa18.46■□□□□ 0.55
CCDC90B-215ENST00000529745 PLIN4Q96Q06 1357 aa18.45■□□□□ 0.54
CCDC90B-215ENST00000529745 LAMA4Q16363 1823 aa18.45■□□□□ 0.54
CCDC90B-215ENST00000529745 TNPO2O14787 897 aaKnown RBP18.45■□□□□ 0.54
CCDC90B-215ENST00000529745 PRKCZQ05513 592 aa18.45■□□□□ 0.54
CCDC90B-215ENST00000529745 ALX1Q15699 326 aa18.45■□□□□ 0.54
CCDC90B-215ENST00000529745 ZYXQ15942 572 aaKnown RBP18.45■□□□□ 0.54
CCDC90B-215ENST00000529745 POTEEQ6S8J3 1075 aa18.45■□□□□ 0.54
CCDC90B-215ENST00000529745 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.45■□□□□ 0.54
CCDC90B-215ENST00000529745 GABRQQ9UN88 632 aa18.45■□□□□ 0.54
CCDC90B-215ENST00000529745 ZMYM6O95789 1325 aa18.45■□□□□ 0.54
CCDC90B-215ENST00000529745 COL11A1P12107 1806 aaPredicted RBP18.44■□□□□ 0.54
CCDC90B-215ENST00000529745 MINDY4BA8MYZ0 360 aa18.44■□□□□ 0.54
CCDC90B-215ENST00000529745 APPP05067 770 aa18.44■□□□□ 0.54
CCDC90B-215ENST00000529745 GRK4P32298 578 aa18.44■□□□□ 0.54
CCDC90B-215ENST00000529745 SLAIN1Q8ND83 568 aa18.44■□□□□ 0.54
CCDC90B-215ENST00000529745 RAET1EQ8TD07 263 aa18.44■□□□□ 0.54
CCDC90B-215ENST00000529745 PXYLP1Q8TE99 480 aa18.44■□□□□ 0.54
CCDC90B-215ENST00000529745 COA7Q96BR5 231 aa18.44■□□□□ 0.54
CCDC90B-215ENST00000529745 NAPBQ9H115 298 aa18.44■□□□□ 0.54
CCDC90B-215ENST00000529745 VCPKMTQ9H867 229 aa18.44■□□□□ 0.54
CCDC90B-215ENST00000529745 TXNRD2Q9NNW7 524 aa18.44■□□□□ 0.54
CCDC90B-215ENST00000529745 RABGAP1Q9Y3P9 1069 aa18.44■□□□□ 0.54
CCDC90B-215ENST00000529745 ZNF236Q9UL36 1845 aa18.44■□□□□ 0.54
CCDC90B-215ENST00000529745 IGKV6D-41A0A0C4DH26 115 aa18.43■□□□□ 0.54
CCDC90B-215ENST00000529745 FLT3LGP49771 235 aa18.43■□□□□ 0.54
CCDC90B-215ENST00000529745 ERVK-9P63128 1117 aa18.43■□□□□ 0.54
CCDC90B-215ENST00000529745 ERVK-24P63145 666 aa18.43■□□□□ 0.54
CCDC90B-215ENST00000529745 MCMDC2Q4G0Z9 681 aa18.43■□□□□ 0.54
CCDC90B-215ENST00000529745 GPRC5AQ8NFJ5 357 aa18.43■□□□□ 0.54
CCDC90B-215ENST00000529745 RPAP3Q9H6T3 665 aaPredicted RBP18.43■□□□□ 0.54
CCDC90B-215ENST00000529745 MKNK2Q9HBH9 465 aa18.43■□□□□ 0.54
CCDC90B-215ENST00000529745 NYAP2Q9P242 653 aa18.43■□□□□ 0.54
CCDC90B-215ENST00000529745 ANAPC4Q9UJX5 808 aa18.43■□□□□ 0.54
CCDC90B-215ENST00000529745 A0A0D9SFI3 127 aa18.42■□□□□ 0.54
CCDC90B-215ENST00000529745 SPDYE16A6NNV3 312 aaPredicted RBP18.42■□□□□ 0.54
CCDC90B-215ENST00000529745 WDR46O15213 610 aaKnown RBP18.42■□□□□ 0.54
CCDC90B-215ENST00000529745 CNMDO75829 334 aa18.42■□□□□ 0.54
CCDC90B-215ENST00000529745 EEF2P13639 858 aaKnown RBP18.42■□□□□ 0.54
CCDC90B-215ENST00000529745 PPARAQ07869 468 aa18.42■□□□□ 0.54
CCDC90B-215ENST00000529745 KIAA1755Q5JYT7 1200 aa18.42■□□□□ 0.54
CCDC90B-215ENST00000529745 CCDC129Q6ZRS4 1044 aa18.42■□□□□ 0.54
CCDC90B-215ENST00000529745 CLEC10AQ8IUN9 316 aa18.42■□□□□ 0.54
CCDC90B-215ENST00000529745 SH3TC2Q8TF17 1288 aa18.42■□□□□ 0.54
CCDC90B-215ENST00000529745 FAM227BQ96M60 508 aa18.42■□□□□ 0.54
CCDC90B-215ENST00000529745 GJD2Q9UKL4 321 aa18.42■□□□□ 0.54
CCDC90B-215ENST00000529745 SYNPO2Q9UMS6 1093 aa18.42■□□□□ 0.54
CCDC90B-215ENST00000529745 TRIM6-TRIM34B2RNG4 842 aa18.41■□□□□ 0.54
CCDC90B-215ENST00000529745 H0YGN5 161 aa18.41■□□□□ 0.54
CCDC90B-215ENST00000529745 SLC3A2P08195 630 aaKnown RBP18.41■□□□□ 0.54
CCDC90B-215ENST00000529745 SDSP20132 328 aa18.41■□□□□ 0.54
CCDC90B-215ENST00000529745 MAPK4P31152 587 aa18.41■□□□□ 0.54
CCDC90B-215ENST00000529745 IRX6P78412 446 aaPredicted RBP18.41■□□□□ 0.54
CCDC90B-215ENST00000529745 PDE4BQ07343 736 aa18.41■□□□□ 0.54
CCDC90B-215ENST00000529745 COG2Q14746 738 aa18.41■□□□□ 0.54
CCDC90B-215ENST00000529745 Q3C1V9 767 aa18.41■□□□□ 0.54
CCDC90B-215ENST00000529745 HOXC10Q9NYD6 342 aa18.41■□□□□ 0.54
CCDC90B-215ENST00000529745 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.41■□□□□ 0.54
CCDC90B-215ENST00000529745 ECM2O94769 699 aaPredicted RBP18.4■□□□□ 0.54
CCDC90B-215ENST00000529745 FGRP09769 529 aa18.4■□□□□ 0.54
CCDC90B-215ENST00000529745 PDE4AP27815 886 aa18.4■□□□□ 0.54
CCDC90B-215ENST00000529745 NMIQ13287 307 aaPredicted RBP18.4■□□□□ 0.54
CCDC90B-215ENST00000529745 VPS53Q5VIR6 699 aa18.4■□□□□ 0.54
CCDC90B-215ENST00000529745 ZNF444Q8N0Y2 327 aaPredicted RBP18.4■□□□□ 0.54
CCDC90B-215ENST00000529745 MKL1Q969V6 931 aa18.4■□□□□ 0.54
CCDC90B-215ENST00000529745 RILPL2Q969X0 211 aa18.4■□□□□ 0.54
CCDC90B-215ENST00000529745 CCDC171Q6TFL3 1326 aa18.4■□□□□ 0.54
CCDC90B-215ENST00000529745 HIP1O00291 1037 aa18.39■□□□□ 0.53
CCDC90B-215ENST00000529745 ADCY3O60266 1144 aa18.39■□□□□ 0.53
CCDC90B-215ENST00000529745 MFAP1P55081 439 aaKnown RBP18.39■□□□□ 0.53
CCDC90B-215ENST00000529745 MB21D1Q8N884 522 aa18.39■□□□□ 0.53
CCDC90B-215ENST00000529745 NEDD1Q8NHV4 660 aa18.39■□□□□ 0.53
CCDC90B-215ENST00000529745 SOCS4Q8WXH5 440 aa18.39■□□□□ 0.53
CCDC90B-215ENST00000529745 TMEM106CQ9BVX2 250 aa18.39■□□□□ 0.53
CCDC90B-215ENST00000529745 GOPCQ9HD26 462 aa18.39■□□□□ 0.53
CCDC90B-215ENST00000529745 HSPD1P10809 573 aaKnown RBP18.38■□□□□ 0.53
CCDC90B-215ENST00000529745 CAPN2P17655 700 aa18.38■□□□□ 0.53
CCDC90B-215ENST00000529745 DSG3P32926 999 aa18.38■□□□□ 0.53
CCDC90B-215ENST00000529745 UBXN2AP68543 259 aa18.38■□□□□ 0.53
CCDC90B-215ENST00000529745 CCNA1P78396 465 aa18.38■□□□□ 0.53
CCDC90B-215ENST00000529745 ZNF589Q86UQ0 364 aaPredicted RBP18.38■□□□□ 0.53
CCDC90B-215ENST00000529745 USP6NLQ92738 828 aa18.38■□□□□ 0.53
CCDC90B-215ENST00000529745 PAGR1Q9BTK6 254 aa18.38■□□□□ 0.53
CCDC90B-215ENST00000529745 PORCNQ9H237 461 aa18.38■□□□□ 0.53
CCDC90B-215ENST00000529745 MTMR4Q9NYA4 1195 aa18.38■□□□□ 0.53
CCDC90B-215ENST00000529745 BTBD7Q9P203 1132 aa18.38■□□□□ 0.53
CCDC90B-215ENST00000529745 ADAMTS5Q9UNA0 930 aa18.38■□□□□ 0.53
CCDC90B-215ENST00000529745 ZNFX1Q9P2E3 1918 aaKnown RBP18.37■□□□□ 0.53
CCDC90B-215ENST00000529745 ORC4O43929 436 aa18.37■□□□□ 0.53
CCDC90B-215ENST00000529745 PEX10O60683 326 aa18.37■□□□□ 0.53
CCDC90B-215ENST00000529745 FGAP02671 866 aa18.37■□□□□ 0.53
CCDC90B-215ENST00000529745 XRCC5P13010 732 aaKnown RBP18.37■□□□□ 0.53
CCDC90B-215ENST00000529745 CHRDL2Q6WN34 429 aa18.37■□□□□ 0.53
CCDC90B-215ENST00000529745 GPR142Q7Z601 462 aa18.37■□□□□ 0.53
CCDC90B-215ENST00000529745 TANGO6Q9C0B7 1094 aa18.37■□□□□ 0.53
CCDC90B-215ENST00000529745 PRDM1O75626 825 aa18.36■□□□□ 0.53
CCDC90B-215ENST00000529745 NOVP48745 357 aa18.36■□□□□ 0.53
CCDC90B-215ENST00000529745 MTFR1Q15390 333 aa18.36■□□□□ 0.53
CCDC90B-215ENST00000529745 PPP4R3BQ5MIZ7 849 aa18.36■□□□□ 0.53
CCDC90B-215ENST00000529745 MORN1Q5T089 497 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms