RNA–Protein interactions for RNA: ENST00000529689.5

CCDC90B-214, Transcript of coiled-coil domain containing 90B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC90B, Length 4,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-214ENST00000529689 C2CD5Q86YS7 1000 aa11.12□□□□□ -0.63
CCDC90B-214ENST00000529689 PYM1Q9BRP8 204 aaKnown RBP11.12□□□□□ -0.63
CCDC90B-214ENST00000529689 DDX41Q9UJV9 622 aaKnown RBP11.12□□□□□ -0.63
CCDC90B-214ENST00000529689 USP42Q9H9J4 1324 aaKnown RBP11.12□□□□□ -0.63
CCDC90B-214ENST00000529689 EFCAB8A8MWE9 144 aa11.12□□□□□ -0.63
CCDC90B-214ENST00000529689 IKBKBO14920 756 aa11.12□□□□□ -0.63
CCDC90B-214ENST00000529689 STX10O60499 249 aa11.12□□□□□ -0.63
CCDC90B-214ENST00000529689 PPP6R2O75170 966 aa11.12□□□□□ -0.63
CCDC90B-214ENST00000529689 PNMA6AP0CW24 399 aaPredicted RBP11.12□□□□□ -0.63
CCDC90B-214ENST00000529689 PLCD1P51178 756 aa11.12□□□□□ -0.63
CCDC90B-214ENST00000529689 CCZ1BP86790 482 aa11.12□□□□□ -0.63
CCDC90B-214ENST00000529689 CCZ1P86791 482 aaPredicted RBP11.12□□□□□ -0.63
CCDC90B-214ENST00000529689 USPL1Q5W0Q7 1092 aa11.12□□□□□ -0.63
CCDC90B-214ENST00000529689 MICALL1Q8N3F8 863 aa11.12□□□□□ -0.63
CCDC90B-214ENST00000529689 GPR161Q8N6U8 529 aaKnown RBP11.12□□□□□ -0.63
CCDC90B-214ENST00000529689 SLC39A2Q9NP94 309 aa11.12□□□□□ -0.63
CCDC90B-214ENST00000529689 TTF2Q9UNY4 1162 aaKnown RBP11.12□□□□□ -0.63
CCDC90B-214ENST00000529689 MED23Q9ULK4 1368 aa11.11□□□□□ -0.63
CCDC90B-214ENST00000529689 CDC42BPGQ6DT37 1551 aa11.11□□□□□ -0.63
CCDC90B-214ENST00000529689 DIP2CQ9Y2E4 1556 aa11.11□□□□□ -0.63
CCDC90B-214ENST00000529689 ZSCAN26Q16670 478 aa11.11□□□□□ -0.63
CCDC90B-214ENST00000529689 TSGA10IPQ3SY00 556 aa11.11□□□□□ -0.63
CCDC90B-214ENST00000529689 PNMA1Q8ND90 353 aa11.11□□□□□ -0.63
CCDC90B-214ENST00000529689 RRP36Q96EU6 259 aaKnown RBP11.11□□□□□ -0.63
CCDC90B-214ENST00000529689 RBM28Q9NW13 759 aaKnown RBP11.11□□□□□ -0.63
CCDC90B-214ENST00000529689 ERLIN2O94905 339 aa11.11□□□□□ -0.63
CCDC90B-214ENST00000529689 FMNL1O95466 1100 aaPredicted RBP11.11□□□□□ -0.63
CCDC90B-214ENST00000529689 CKAP4Q07065 602 aaKnown RBP11.11□□□□□ -0.63
CCDC90B-214ENST00000529689 SUSD4Q5VX71 490 aa11.11□□□□□ -0.63
CCDC90B-214ENST00000529689 TTC19Q6DKK2 380 aaPredicted RBP11.11□□□□□ -0.63
CCDC90B-214ENST00000529689 OR8K1Q8NGG5 319 aa11.11□□□□□ -0.63
CCDC90B-214ENST00000529689 FERMT2Q96AC1 680 aa11.11□□□□□ -0.63
CCDC90B-214ENST00000529689 WDR24Q96S15 920 aa11.11□□□□□ -0.63
CCDC90B-214ENST00000529689 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.11□□□□□ -0.63
CCDC90B-214ENST00000529689 GDAQ9Y2T3 454 aa11.11□□□□□ -0.63
CCDC90B-214ENST00000529689 MCM3P25205 808 aa11.11□□□□□ -0.63
CCDC90B-214ENST00000529689 RPS8P62241 208 aaKnown RBP11.11□□□□□ -0.63
CCDC90B-214ENST00000529689 DCAF17Q5H9S7 520 aaPredicted RBP11.11□□□□□ -0.63
CCDC90B-214ENST00000529689 UTP14CQ5TAP6 766 aaKnown RBP11.11□□□□□ -0.63
CCDC90B-214ENST00000529689 SND1Q7KZF4 910 aaKnown RBP eCLIP11.11□□□□□ -0.63
CCDC90B-214ENST00000529689 RRAGAQ7L523 313 aa11.11□□□□□ -0.63
CCDC90B-214ENST00000529689 EHBP1Q8NDI1 1231 aa11.11□□□□□ -0.63
CCDC90B-214ENST00000529689 ADAMTS13Q76LX8 1427 aa11.1□□□□□ -0.63
CCDC90B-214ENST00000529689 TLDC2A0PJX2 215 aa11.1□□□□□ -0.63
CCDC90B-214ENST00000529689 ZBTB22O15209 634 aa11.1□□□□□ -0.63
CCDC90B-214ENST00000529689 ANTXR2P58335 489 aa11.1□□□□□ -0.63
CCDC90B-214ENST00000529689 LONRF2Q1L5Z9 754 aa11.1□□□□□ -0.63
CCDC90B-214ENST00000529689 RABL6Q3YEC7 729 aaPredicted RBP11.1□□□□□ -0.63
CCDC90B-214ENST00000529689 DYNLL2Q96FJ2 89 aa11.1□□□□□ -0.63
CCDC90B-214ENST00000529689 EPN1Q9Y6I3 576 aaPredicted RBP11.1□□□□□ -0.63
CCDC90B-214ENST00000529689 HSF2BPO75031 334 aa11.1□□□□□ -0.63
CCDC90B-214ENST00000529689 PARP1P09874 1014 aaKnown RBP11.1□□□□□ -0.63
CCDC90B-214ENST00000529689 CXCR5P32302 372 aa11.1□□□□□ -0.63
CCDC90B-214ENST00000529689 MAGEA1P43355 309 aa11.1□□□□□ -0.63
CCDC90B-214ENST00000529689 FAM98CQ17RN3 349 aaKnown RBP11.1□□□□□ -0.63
CCDC90B-214ENST00000529689 NCAPH2Q6IBW4 605 aa11.1□□□□□ -0.63
CCDC90B-214ENST00000529689 UBN2Q6ZU65 1347 aa11.1□□□□□ -0.63
CCDC90B-214ENST00000529689 CYP2D6P10635 497 aa11.1□□□□□ -0.63
CCDC90B-214ENST00000529689 SCG2P13521 617 aa11.1□□□□□ -0.63
CCDC90B-214ENST00000529689 HPDP32754 393 aaPredicted RBP11.1□□□□□ -0.63
CCDC90B-214ENST00000529689 SV2BQ7L1I2 683 aa11.1□□□□□ -0.63
CCDC90B-214ENST00000529689 CABP7Q86V35 215 aa11.1□□□□□ -0.63
CCDC90B-214ENST00000529689 BLIDQ8IZY5 108 aa11.1□□□□□ -0.63
CCDC90B-214ENST00000529689 TRIM31Q9BZY9 425 aa11.1□□□□□ -0.63
CCDC90B-214ENST00000529689 LRWD1Q9UFC0 647 aa11.1□□□□□ -0.63
CCDC90B-214ENST00000529689 B4DLN1 442 aa11.09□□□□□ -0.63
CCDC90B-214ENST00000529689 BUB1O43683 1085 aa11.09□□□□□ -0.63
CCDC90B-214ENST00000529689 USP17L8P0C7I0 530 aa11.09□□□□□ -0.63
CCDC90B-214ENST00000529689 TERF2Q15554 542 aa11.09□□□□□ -0.63
CCDC90B-214ENST00000529689 METTL16Q86W50 562 aaKnown RBP11.09□□□□□ -0.63
CCDC90B-214ENST00000529689 GPATCH11Q8N954 259 aa11.09□□□□□ -0.63
CCDC90B-214ENST00000529689 PTPRUQ92729 1446 aa11.09□□□□□ -0.63
CCDC90B-214ENST00000529689 GPR101Q96P66 508 aaPredicted RBP11.09□□□□□ -0.63
CCDC90B-214ENST00000529689 SHPRHQ149N8 1683 aa11.09□□□□□ -0.63
CCDC90B-214ENST00000529689 ADGRB2O60241 1585 aa11.09□□□□□ -0.63
CCDC90B-214ENST00000529689 GNA11P29992 359 aa11.09□□□□□ -0.63
CCDC90B-214ENST00000529689 COPB1P53618 953 aaKnown RBP11.09□□□□□ -0.63
CCDC90B-214ENST00000529689 PARP10Q53GL7 1025 aa11.09□□□□□ -0.63
CCDC90B-214ENST00000529689 VPS36Q86VN1 386 aa11.09□□□□□ -0.63
CCDC90B-214ENST00000529689 CTNNBL1Q8WYA6 563 aaPredicted RBP11.09□□□□□ -0.63
CCDC90B-214ENST00000529689 PKD2L1Q9P0L9 805 aa11.09□□□□□ -0.63
CCDC90B-214ENST00000529689 SAMM50Q9Y512 469 aa11.09□□□□□ -0.63
CCDC90B-214ENST00000529689 FRMPD2Q68DX3 1309 aaPredicted RBP11.09□□□□□ -0.63
CCDC90B-214ENST00000529689 TRIM49BA6NDI0 452 aa11.09□□□□□ -0.63
CCDC90B-214ENST00000529689 SMCO2A6NFE2 343 aa11.09□□□□□ -0.63
CCDC90B-214ENST00000529689 RPN1P04843 607 aaKnown RBP11.09□□□□□ -0.63
CCDC90B-214ENST00000529689 ZSCAN20P17040 1043 aaPredicted RBP11.09□□□□□ -0.63
CCDC90B-214ENST00000529689 CRKLP46109 303 aaKnown RBP11.09□□□□□ -0.63
CCDC90B-214ENST00000529689 MNAT1P51948 309 aa11.09□□□□□ -0.63
CCDC90B-214ENST00000529689 DIXDC1Q155Q3 683 aa11.09□□□□□ -0.63
CCDC90B-214ENST00000529689 KLHL7Q8IXQ5 586 aa11.09□□□□□ -0.63
CCDC90B-214ENST00000529689 SNX29Q8TEQ0 813 aa11.09□□□□□ -0.63
CCDC90B-214ENST00000529689 LY9Q9HBG7 655 aa11.09□□□□□ -0.63
CCDC90B-214ENST00000529689 SAR1BQ9Y6B6 198 aa11.09□□□□□ -0.63
CCDC90B-214ENST00000529689 WDR17Q8IZU2 1322 aa11.09□□□□□ -0.63
CCDC90B-214ENST00000529689 CEMIPQ8WUJ3 1361 aa11.09□□□□□ -0.63
CCDC90B-214ENST00000529689 BICDL2A1A5D9 508 aa11.08□□□□□ -0.64
CCDC90B-214ENST00000529689 SLFN14P0C7P3 912 aa11.08□□□□□ -0.64
CCDC90B-214ENST00000529689 FMR1Q06787 632 aaKnown RBP eCLIP11.08□□□□□ -0.64
CCDC90B-214ENST00000529689 LRRC41Q15345 812 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms